Pre_GI: BLASTN Hits

Some Help

Query: NC_010610:1580483 Lactobacillus fermentum IFO 3956, complete genome

Start: 1580483, End: 1629244, Length: 48762

Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010610:16495001649500167265923160Lactobacillus fermentum IFO 3956, complete genome02569BLASTN svgBLASTP svg
NC_010610:1385066*1385066141573130666Lactobacillus fermentum IFO 3956, complete genome02541BLASTN svgBLASTP svg
NC_010610:79597579597582885432880Lactobacillus fermentum IFO 3956, complete genome02535BLASTN svgBLASTP svg
NC_010610:17650001765000179344828449Lactobacillus fermentum IFO 3956, complete genome02520BLASTN svgBLASTP svg
NC_010610:86119486119488392322730Lactobacillus fermentum IFO 3956, complete genome02512BLASTN svgBLASTP svg
NC_010610:10750010750013485227353Lactobacillus fermentum IFO 3956, complete genome02470BLASTN svgBLASTP svg
NC_010610:20136592013659205177738119Lactobacillus fermentum IFO 3956, complete genome02448BLASTN svgBLASTP svg
NC_010610:755000*75500078559930600Lactobacillus fermentum IFO 3956, complete genome02379BLASTN svgBLASTP svg
NC_010610:11784301178430122897750548Lactobacillus fermentum IFO 3956, complete genome02089BLASTN svgBLASTP svg
NC_008497:32160321605098118822Lactobacillus brevis ATCC 367, complete genome01796BLASTN svgBLASTP svg
NC_010610:269380*26938029559926220Lactobacillus fermentum IFO 3956, complete genome3e-91345BLASTN svgBLASTP svg
NC_008529:16344031634403165802723625Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete4e-81311BLASTN svgBLASTP svg
NC_008054:16491601649160168970940550Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete4e-81311BLASTN svgBLASTP svg
NC_014727:18777641877764191259934836Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,3e-75291BLASTN svgBLASTP svg
NC_014727:18321441832144185459922456Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,2e-70276BLASTN svgBLASTP svg
NC_008054:16175441617544164365226109Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete5e-68268BLASTN svgBLASTP svg
NC_008525:56100056100058709926100Pediococcus pentosaceus ATCC 25745, complete genome1e-43186BLASTN svgBLASTP svg
NC_010999:62348962348964609722609Lactobacillus casei, complete genome9e-39170BLASTN svgBLASTP svg
NC_010610:90845290845293309924648Lactobacillus fermentum IFO 3956, complete genome2e-36163BLASTN svgBLASTP svg
NC_010999:20597382059738208224722510Lactobacillus casei, complete genome1e-22117BLASTN svgBLASTP svg
NC_010080:19119321911932194663334702Lactobacillus helveticus DPC 4571, complete genome3e-20109BLASTN svgBLASTP svg
NC_014106:24483124483126509920269Lactobacillus crispatus ST1, complete genome1e-19107BLASTN svgBLASTP svg
NC_004567:10667101066710108627219563Lactobacillus plantarum WCFS1, complete genome7e-18101BLASTN svgBLASTP svg
NC_007929:1290568*1290568131407323506Lactobacillus salivarius subsp. salivarius UCC118, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_015420:35384353846199926616Lactobacillus buchneri NRRL B-30929 plasmid pLBUC01, complete1e-1387.7BLASTN svgBLASTP svg
NC_013961:30838163083816310609922284Erwinia amylovora, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_008526:34344534344536727223828Lactobacillus casei ATCC 334, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_004567:10892311089231111490125671Lactobacillus plantarum WCFS1, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_012214:74530274530276695921658Erwinia pyrifoliae Ep1/96, complete genome6e-0971.9BLASTN svgBLASTP svg
NC_010694:71550071550073887123372Erwinia tasmaniensis, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_007645:6013242*6013242603721023969Hahella chejuensis KCTC 2396, complete genome6e-0661.9BLASTN svgBLASTP svg