Pre_GI: BLASTP Hits

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Query: NC_015761:2726000:2740109 Salmonella bongori NCTC 12419, complete genome

Start: 2740109, End: 2741770, Length: 1662

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011094:2913500:2927061292706129287221662Salmonella enterica subsp. enterica serovar Schwarzengrund strinvasion protein regulator01066
NC_006905:2960260:2973384297338429750451662Salmonella enterica subsp. enterica serovar Choleraesuis strinvasion genes transcription activator01066
NC_011080:2982346:2996360299636029980211662Salmonella enterica subsp. enterica serovar Newport str. SL254,transcriptional regulator HilA01066
NC_011149:2912219:2928382292838229300431662Salmonella enterica subsp. enterica serovar Agona str. SL483,transcriptional regulator HilA01066
NC_011083:2980356:2994370299437029960311662Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transcriptional regulator HilA01066
NC_003197:3005842:3019856301985630215171662Salmonella typhimurium LT2, complete genomeinvasion protein transcriptional activator01066
NC_011274:2881306:2895320289532028969811662Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91invasion protein regulator01066
NC_011294:2890500:2904516290451629061771662Salmonella enterica subsp. enterica serovar Enteritidis strinvasion protein regulator01066
NC_012125:2938519:2953767295376729554281662Salmonella enterica subsp. enterica serovar Paratyphi C straininvasion protein regulator01066
NC_016810:3028421:3042432304243230440931662Salmonella enterica subsp. enterica serovar Typhimurium strinvasion protein regulator01066
NC_016831:2867766:2881779288177928834401662Salmonella enterica subsp. enterica serovar Gallinarum/pulloruminvasion protein regulator01066
NC_016856:3026426:3040093304009330417541662Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sinvasion protein regulator01066
NC_016857:3028421:3042432304243230440931662Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74Transcriptional regulator hilA01066
NC_016860:3029272:3043286304328630449471662Salmonella enterica subsp. enterica serovar Typhimurium strinvasion protein regulator01066
NC_016863:2974333:2988346298834629900071662Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1invasion protein regulator01066
NC_017046:3027161:3041172304117230428331662Salmonella enterica subsp. enterica serovar Typhimurium str. 798invasion protein regulator01066
NC_010102:2967464:2982838298283829844991662Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein01066
NC_010067:84093:9297192971946321662Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein01065
NC_016832:2829767:2845022284502228466831662Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Transcriptional regulator hilA01064
NC_004631:2842453:2857723285772328593841662Salmonella enterica subsp. enterica serovar Typhi Ty2, completeinvasion protein regulator01064
NC_003198:2856596:2871866287186628735271662Salmonella enterica subsp. enterica serovar Typhi str. CT18,invasion protein regulator01064
NC_011147:2814664:2829938282993828315991662Salmonella enterica subsp. enterica serovar Paratyphi A strinvasion protein regulator01064
NC_006511:2819128:2834402283440228360631662Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCinvasion protein regulator01064
NC_011205:3050235:3064247306424730659141668Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853invasion protein regulator01060
NC_011750:4390000:4424887442488744265841698Escherichia coli IAI39 chromosome, complete genomeinvasion protein regulator3e-102372
NC_011751:4293966:4306667430666743083641698Escherichia coli UMN026 chromosome, complete genomeinvasion protein regulator1e-101371
NC_011750:3407500:3420871342087134222471377Escherichia coli IAI39 chromosome, complete genometranscriptional regulator9e-40165
NC_011751:3285646:3298960329896033003361377Escherichia coli UMN026 chromosome, complete genometranscriptional regulator8e-39162
NC_002695:3702344:3714734371473437161101377Escherichia coli O157:H7 str. Sakai, complete genomeputative invasion protein8e-39162
NC_002655:3769643:3782034378203437834101377Escherichia coli O157:H7 EDL933, complete genomeputative invasion protein8e-39162
NC_011353:3805819:3819131381913138205071377Escherichia coli O157:H7 str. EC4115 chromosome, complete genometranscriptional regulator8e-39162
NC_013008:3761467:3773857377385737752331377Escherichia coli O157:H7 str. TW14359 chromosome, complete genometranscriptional regulator8e-39162
NC_000913:2975659:2990116299011629914921377Escherichia coli K12, complete genomepredictedtranscriptional regulator8e-39162
CU928145:3196173:3209247320924732106231377Escherichia coli 55989 chromosome, complete genomeputative transcriptional regulator8e-39162
NC_009801:3175714:3188788318878831901641377Escherichia coli E24377A, complete genometranscriptional regulatory protein, C terminal8e-39162
CU928160:3030324:3043398304339830447741377Escherichia coli IAI1 chromosome, complete genomeputative transcriptional regulator8e-39162
NC_010473:3069529:3083986308398630853621377Escherichia coli str. K-12 substr. DH10B, complete genomepredictedtranscriptional regulator8e-39162
NC_012759:2862807:2877264287726428786401377Escherichia coli BW2952 chromosome, complete genometranscriptional regulator8e-39162
NC_011741:3030324:3043398304339830447741377Escherichia coli IAI1 chromosome, complete genometranscriptional regulator8e-39162
NC_011415:3217796:3230870323087032322461377Escherichia coli SE11 chromosome, complete genometranscriptional regulator8e-39162
NC_010468:906957:9269989269989283741377Escherichia coli ATCC 8739, complete genometranscriptional regulator, CadC8e-39162
NC_009800:2995958:3010649301064930120251377Escherichia coli HS, complete genometranscriptional regulatory protein, C terminal8e-39162
NC_011748:3196173:3209247320924732106231377Escherichia coli 55989, complete genometranscriptional regulator8e-39162
AC_000091:2976293:2990750299075029921261377Escherichia coli W3110 DNA, complete genomepredictedtranscriptional regulator8e-39162
CP002185:3167738:3182195318219531835711377Escherichia coli W, complete genomeputative invasion genes regulator1e-38161
CP002516:903241:9225059225059238811377Escherichia coli KO11, complete genometranscriptional regulator, CadC1e-38161
NC_016902:903241:9225059225059238811377Escherichia coli KO11FL chromosome, complete genometranscriptional regulator CadC1e-38161
NC_013361:3867558:3880632388063238820081377Escherichia coli O26:H11 str. 11368 chromosome, complete genometranscriptional regulator8e-38159
NC_013353:3474077:3487149348714934885251377Escherichia coli O103:H2 str. 12009, complete genometranscriptional regulator1e-37158
AP010958:3474077:3487149348714934885251377Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted transcriptional regulator1e-37158
NC_013364:3552284:3565364356536435667401377Escherichia coli O111:H- str. 11128, complete genomeputative transcriptional regulator2e-37157
NC_016822:3282654:329816132981613298619459Shigella sonnei 53G, complete genometranscriptional regulator7e-1789.4
NC_013941:3540420:355280935528093553099291Escherichia coli O55:H7 str. CB9615 chromosome, complete genome6e-1272.8
NC_015500:1204501:120703612070361207752717Treponema brennaborense DSM 12168 chromosome, complete genometwo component transcriptional regulator, winged helix family6e-0963.2
NC_014307:233045:2657302657302674841755Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein7e-0962.8
NC_020291:1389114:139595413959541396655702Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomealkaline phosphatase synthesis transcriptional regulatory protein PhoP7e-0962.8
NC_009328:293000:322879322879323541663Geobacillus thermodenitrificans NG80-2 chromosome, complete genometranscriptional regulator1e-0862
NC_009485:1946000:1956702195670219596202919Bradyrhizobium sp. BTAi1 chromosome, complete genometranscriptional regulator1e-0758.2
NC_014100:449541:4747094747094775672859Caulobacter segnis ATCC 21756 chromosome, complete genomewinged helix family transcriptional regulator1e-0758.2
NC_014965:997344:1033178103317810347581581Vibrio vulnificus MO6-24/O chromosome I, complete sequencetranscriptional activator of cad operon6e-0756.2
NC_004459:2025436:2048197204819720497711575Vibrio vulnificus CMCP6 chromosome I, complete sequenceTranscriptional regulator CadC5e-0756.2
NC_011886:1891077:192361119236111924297687Arthrobacter chlorophenolicus A6, complete genometwo component transcriptional regulator, winged helix family1e-0655.5
NC_011837:3814000:383413938341393834840702Clostridium kluyveri NBRC 12016, complete genomehypothetical protein1e-0655.1
NC_009706:3882500:390263639026363903331696Clostridium kluyveri DSM 555 chromosome, complete genometranscriptional regulator1e-0655.1
NC_016012:236012:274141274141274830690Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeDNA-binding response regulator2e-0654.7
NC_015732:773143:803449803449804156708Spirochaeta caldaria DSM 7334 chromosome, complete genometwo component transcriptional regulator, winged helix family3e-0653.9
NC_020211:2206500:222202722220272222698672Serratia marcescens WW4, complete genomeDNA-binding response regulator in two-component regulatory system with PhoQ4e-0653.5