Pre_GI: BLASTP Hits

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Query: NC_015379:3736500:3754493 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Start: 3754493, End: 3755095, Length: 603

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:3230939:323805032380503238652603Pseudomonas fluorescens F113 chromosome, complete genomecro ci family transcriptional regulator1e-113408
NC_020064:79422:976759767598283609Serratia marcescens FGI94, complete genomeputative transcriptional regulator9e-73272
NC_003296:1696958:170194817019481702565618Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE TRANSCRIPTION REGULATOR PROTEIN9e-67252
NC_003296:1665569:167175816717581672375618Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE DNA-BINDING TRANSCRIPTIONAL REGULATORY TRANSCRIPTION REGULATOR PROTEIN9e-67252
NC_014121:4577324:458073445807344581336603Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein4e-66250
NC_011149:1429523:144464314446431445245603Salmonella enterica subsp. enterica serovar Agona str. SL483,transcriptional regulator, Cro/CI family2e-64244
NC_011094:1726000:173106917310691731671603Salmonella enterica subsp. enterica serovar Schwarzengrund strtranscriptional regulator, Cro/CI family protein1e-63242
NC_003197:1753663:175788917578891758491603Salmonella typhimurium LT2, complete genomeputative transcriptional regulator1e-63242
NC_016810:1709695:171474217147421715344603Salmonella enterica subsp. enterica serovar Typhimurium strDNA-binding protein1e-63242
NC_016856:1763640:176786617678661768468603Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transcriptional regulator1e-63242
NC_016857:1709695:171474217147421715344603Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transcriptional regulator1e-63242
NC_016860:1752000:175558017555801756182603Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator1e-63242
NC_016863:1711832:171605817160581716660603Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator1e-63242
NC_017046:1709578:171462517146251715227603Salmonella enterica subsp. enterica serovar Typhimurium str. 798DNA-binding protein1e-63242
NC_011080:1750000:175424417542441754846603Salmonella enterica subsp. enterica serovar Newport str. SL254,transcriptional regulator, Cro/CI family3e-63241
NC_006905:1766000:177105217710521771654603Salmonella enterica subsp. enterica serovar Choleraesuis strputative transcriptional regulator9e-63239
NC_004631:1623511:162855816285581629160603Salmonella enterica subsp. enterica serovar Typhi Ty2, completeconserved hypothetical DNA-binding protein7e-63239
NC_003198:1336894:135202213520221352624603Salmonella enterica subsp. enterica serovar Typhi str. CT18,conserved hypothetical DNA-binding protein7e-63239
NC_011147:1267005:128212412821241282726603Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-62238
NC_006511:1273162:128828112882811288883603Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCconserved hypothetical DNA-binding protein1e-62238
NC_016816:4129299:415585641558564156458603Pantoea ananatis LMG 5342, complete genomeB3/4 domain-containing protein5e-62236
NC_020063:3690308:373506937350693735671603Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcriptional regulator4e-58224
NC_016512:2322598:232886723288672329460594Propionibacterium acnes TypeIA2 P.acn17 chromosome, completecupin domain protein3e-26118
NC_016511:2321999:232953423295342330118585Propionibacterium acnes TypeIA2 P.acn31 chromosome, completecupin domain protein3e-26118
NC_016516:2314115:232039223203922320976585Propionibacterium acnes TypeIA2 P.acn33 chromosome, completecupin domain protein3e-26118
NC_014039:2320307:232631423263142327180867Propionibacterium acnes SK137 chromosome, complete genomecupin domain protein7e-26117
NC_006085:2384892:239089723908972391763867Propionibacterium acnes KPA171202, complete genomeputative transcriptional regulator2e-25115
NC_007948:4558000:460677746067774607370594Polaromonas sp. JS666, complete genometranscriptional regulator, XRE family1e-1996.3
NC_012660:4149487:415199341519934152619627Pseudomonas fluorescens SBW25 chromosome, complete genomeputative DNA binding protein9e-1786.7
NC_009075:3113393:294829483556609Burkholderia pseudomallei 668 chromosome II, complete sequenceDNA-binding protein4e-1684.7
NC_009078:3087759:294829483556609Burkholderia pseudomallei 1106a chromosome II, complete sequenceDNA-binding/cupin domain protein4e-1684.7
NC_007435:1825741:184202518420251842633609Burkholderia pseudomallei 1710b chromosome II, complete sequenceputative DNA-binding protein4e-1684.7
NC_009079:2339756:408640864694609Burkholderia mallei NCTC 10247 chromosome I, complete sequenceDNA-binding protein6e-1684
NC_006351:3159630:294629463554609Burkholderia pseudomallei K96243 chromosome 2, complete sequenceDNA-binding protein6e-1684
NC_008835:1483237:149940114994011500009609Burkholderia mallei NCTC 10229 chromosome I, complete sequenceDNA-binding protein6e-1684
NC_008784:1151305:116827711682771168885609Burkholderia mallei SAVP1 chromosome I, complete sequenceDNA-binding protein6e-1684
NC_006349:2311817:408640864694609Burkholderia mallei ATCC 23344 chromosome 2, complete sequenceDNA-binding protein6e-1684
NC_014328:2518081:253808325380832538637555Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehypothetical protein1e-1583.2
NC_007650:2901751:295029503558609Burkholderia thailandensis E264 chromosome II, complete sequenceDNA-binding protein1e-1583.2
NC_014624:1369642:137228713722871372838552Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein2e-1582.4
NC_007907:4956500:498991149899114990465555Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-1480.1
NC_009617:1487110:149075414907541491308555Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehelix-turn-helix domain-containing protein2e-1375.5
NC_014121:4043198:405680640568064057378573Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-1375.5
NC_011283:1178500:118395211839521184521570Klebsiella pneumoniae 342 chromosome, complete genomeDNA-binding protein7e-1373.9
NC_020126:7285452:729938772993877299959573Myxococcus stipitatus DSM 14675, complete genomeXRE family transcriptional regulator4e-1271.2
NC_013406:3650300:365837636583763658936561Paenibacillus sp. Y412MC10 chromosome, complete genomeXRE family transcriptional regulator5e-1167.8
NC_015563:3979500:399881739988173999386570Delftia sp. Cs1-4 chromosome, complete genomehelix-turn-helix domain-containing protein1e-1066.6
NC_013510:747042:762300762300762866567Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family2e-1065.5
NC_014640:5047201:504847650484765049030555Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein3e-1065.1
NC_009617:4805413:480886648088664809417552Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeXRE family transcriptional regulator3e-1064.7
NC_013939:1535071:155165715516571552193537Deferribacter desulfuricans SSM1, complete genomeXRE family transcriptional regulator6e-1064.3
NC_015723:2116090:211951321195132120103591Cupriavidus necator N-1 chromosome 2, complete sequenceN-carbamoyl-L-amino acid hydrolase AmaB7e-1063.9
NC_014532:1481787:150309715030971503672576Halomonas elongata DSM 2581, complete genomehypothetical protein8e-1063.5
NC_012522:7837071:785901578590157859641627Rhodococcus opacus B4, complete genomehypothetical protein1e-0962.8
NC_015138:693865:707847707847708416570Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completehelix-turn-helix domain-containing protein1e-0962.8
NC_004129:2609189:261369426136942614242549Pseudomonas fluorescens Pf-5, complete genomeDNA-binding protein2e-0962.4
NC_014328:1286407:130205613020561302601546Clostridium ljungdahlii ATCC 49587 chromosome, complete genometranscriptional regulator2e-0962.4
NC_004557:1553000:155369415536941554401708Clostridium tetani E88, complete genomeputative transcriptional regulatory protein2e-0962
NC_016816:4129299:414295041429504143534585Pantoea ananatis LMG 5342, complete genomeputative transcriptional regulator6e-0960.8
NC_016818:3736213:375836837583683758922555Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative transcriptional regulator7e-0960.5
NC_013947:4363250:437654343765434377166624Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, XRE family1e-0859.7
NC_019673:3253650:325551432555143256071558Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, XRE family3e-0858.5
NC_013941:733286:745237745237745821585Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeHelix-turn-helix domain protein4e-0858.2
NC_011745:1287714:129306912930691293653585Escherichia coli ED1a chromosome, complete genomeputative transcriptional regulator4e-0858.2
NC_008253:1228485:123373712337371234321585Escherichia coli 536, complete genomeprobable transcriptional regulator4e-0858.2
NC_008148:2498000:252032625203262520988663Rubrobacter xylanophilus DSM 9941, complete genometranscriptional regulator, XRE family with cupin sensor4e-0857.8
NC_010002:3509506:351042335104233510992570Delftia acidovorans SPH-1, complete genometranscriptional regulator, XRE family6e-0857.4
NC_015663:3742738:375698237569823757566585Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative transcriptional regulator2e-0755.5
NC_020181:1653261:166067016606701661254585Enterobacter aerogenes EA1509E, complete genomeFIG00644802: hypothetical protein4e-0754.7
NC_020064:2728569:273358927335892734137549Serratia marcescens FGI94, complete genomeputative transcriptional regulator4e-0754.7
NC_006510:2910000:291967829196782920220543Geobacillus kaustophilus HTA426, complete genomehypothetical protein7e-0753.9
NC_015567:2328782:233007923300792330642564Serratia sp. AS9 chromosome, complete genomehelix-turn-helix domain-containing protein8e-0753.5
NC_015566:2328771:233006823300682330631564Serratia sp. AS12 chromosome, complete genomehelix-turn-helix domain-containing protein8e-0753.5
NC_020064:1962172:199164219916421992199558Serratia marcescens FGI94, complete genomeputative transcriptional regulator1e-0652.8
NC_014010:1850500:188064418806441881270627Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeDNA-binding protein1e-0652.8
NC_013508:1862896:187347118734711874055585Edwardsiella tarda EIB202, complete genomepredicted transcriptional regulator2e-0652.4
NC_015434:3507059:352202535220253522603579Verrucosispora maris AB-18-032 chromosome, complete genomeXRE family transcriptional regulator3e-0651.6
NC_007948:3502843:352327835232783523883606Polaromonas sp. JS666, complete genometranscriptional regulator, XRE family with cupin sensor domain3e-0651.6
NC_015376:3320818:335258433525843353144561Burkholderia gladioli BSR3 chromosome chromosome 2, completetranscriptional regulator, XRE family5e-0651.2
NC_014307:3179100:318300231830023183589588Ralstonia solanacearum CFBP2957 chromosome, complete genometranscriptional regulatory protein with hth domain5e-0651.2
NC_014118:2417838:242979424297942430366573Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, XRE family6e-0650.8
NC_010742:1794000:1797845179784517997971953Brucella abortus S19 chromosome 1, complete sequencetranscriptional regulator, Cro/CI family7e-0650.4
NC_004310:1777721:1782720178272017846481929Brucella suis 1330 chromosome I, complete sequencetranscriptional regulator, Cro/CI family7e-0650.4
NC_007618:1792500:1796708179670817986361929Brucella melitensis biovar Abortus 2308 chromosome I, completeSAM (and some other nucleotide) binding motif:Helix-turn-helix motif7e-0650.4
NC_015857:1809500:1813481181348118154091929Brucella pinnipedialis B2/94 chromosome chromosome 1, completeCro/CI family transcriptional regulator7e-0650.4
NC_010103:1777000:1780871178087117828231953Brucella canis ATCC 23365 chromosome I, complete sequencehypothetical protein7e-0650.4
NC_010167:1287000:1290803129080312927551953Brucella suis ATCC 23445 chromosome II, complete sequencehypothetical protein7e-0650.4
NC_006932:1795500:1799556179955618015081953Brucella abortus biovar 1 str. 9-941 chromosome I, completetranscriptional regulator, Cro/CI family7e-0650.4