Pre_GI: BLASTP Hits

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Query: NC_012917:2921932:2943953 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 2943953, End: 2945677, Length: 1725

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004547:1970686:1970686197068619724101725Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeflagellar M-ring protein0888
NC_014500:3023762:3051871305187130535921722Dickeya dadantii 3937 chromosome, complete genomeflagellar M-ring protein fliF0690
NC_012912:1788308:1791406179140617931121707Dickeya zeae Ech1591, complete genomeflagellar M-ring protein FliF0685
NC_012880:1765920:1822054182205418237631710Dickeya dadantii Ech703, complete genomeflagellar M-ring protein FliF0681
NC_008800:2695977:2731117273111727328171701Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,flagellar MS-ring protein0659
NC_015224:2017781:2020849202084920225281680Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,flagellar MS-ring protein0645
NC_009778:1222273:1225359122535912270561698Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein7e-179627
NC_014837:2586870:2602754260275426044691716Pantoea sp. At-9b chromosome, complete genomeflagellar M-ring protein FliF6e-178624
NC_016514:2950860:2976412297641229780911680Enterobacter cloacae EcWSU1 chromosome, complete genomeflagellar M-ring protein2e-173609
NC_016816:1912366:1917144191714419188621719Pantoea ananatis LMG 5342, complete genomeflagellar M-ring protein FliF3e-173608
NC_014562:1844268:1865581186558118673081728Pantoea vagans C9-1 chromosome, complete genomeFlagellar M-ring protein7e-173607
NC_013592:1730505:1732230173223017339541725Dickeya dadantii Ech586, complete genomeflagellar M-ring protein FliF3e-139495
NC_009138:1843998:1893501189350118951381638Herminiimonas arsenicoxydans, complete genomeflagellar biosynthesis; basal-body MS(membrane and supramembrane)-ring and collar protein2e-109396
NC_004344:26828:6384663846655551710Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein3e-106386
NC_016893:43234:6509665096667901695Wigglesworthia glossinidia endosymbiont of Glossina morsitansflagellar basal-body MS-ring and collar protein3e-88326
NC_015138:4905935:4905935490593549076411707Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeflagellar M-ring protein FliF3e-82306
NC_013939:492959:4972604972604989301671Deferribacter desulfuricans SSM1, complete genomeflagellar M-ring protein FliF9e-66251
NC_007508:2277640:2277640227764022793641725Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeflagellar biosynthesis lipoprotein FliF2e-62241
NC_008340:774206:7913967913967931381743Alkalilimnicola ehrlichei MLHE-1, complete genomeflagellar M-ring protein FliF1e-62241
NC_013851:3300278:3319557331955733212901734Allochromatium vinosum DSM 180 chromosome, complete genomeflagellar M-ring protein FliF1e-60234
NC_015733:4253961:4253961425396142557391779Pseudomonas putida S16 chromosome, complete genomeflagellar MS-ring protein6e-57222
NC_014355:2210884:2233748223374822353041557Candidatus Nitrospira defluvii, complete genomeflagellar M-ring protein FliF7e-57222
NC_013943:2431643:2444557244455724462241668Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeflagellar M-ring protein FliF3e-53210
NC_007912:2768363:2783820278382027854901671Saccharophagus degradans 2-40, complete genomeflagellar M-ring protein2e-52207
NC_013223:685628:6927666927666942801515Desulfohalobium retbaense DSM 5692, complete genomeflagellar M-ring protein FliF6e-52205
NC_011899:1807365:1809171180917118107301560Halothermothrix orenii H 168, complete genomeflagellar M-ring protein FliF1e-51204
NC_008536:435221:4352214352214369331713Solibacter usitatus Ellin6076, complete genomeflagellar M-ring protein FliF2e-51204
NC_012440:659646:6712296712296728181590Persephonella marina EX-H1, complete genomeflagellar M-ring protein FliF2e-51203
NC_019978:625476:6317716317716333151545Halobacteroides halobius DSM 5150, complete genomeflagellar basal-body M-ring protein/flagellar hook-basal body protein FliF2e-50200
NC_009831:66518:8512985129868411713Shewanella sediminis HAW-EB3, complete genomeflagellar M-ring protein FliF3e-49197
NC_015966:2337833:2374604237460423762051602Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeflagellar M-ring protein FliF6e-45182
NC_014377:1060000:1073721107372110752741554Thermosediminibacter oceani DSM 16646 chromosome, complete genomeflagellar M-ring protein FliF1e-44181
NC_007645:4195500:4229915422991542313031389Hahella chejuensis KCTC 2396, complete genomeflagellar M-ring protein FliF6e-42172
NC_013093:2599591:2603991260399126056701680Actinosynnema mirum DSM 43827, complete genomeflagellar M-ring protein FliF1e-39165
NC_009664:533021:5526955526955543081614Kineococcus radiotolerans SRS30216, complete genomeflagellar M-ring protein FliF2e-39164
NC_010424:1857062:1857062185706218586181557Candidatus Desulforudis audaxviator MP104C, complete genomeflagellar M-ring protein FliF1e-39164
NC_020911:2921925:2952096295209629539761881Octadecabacter antarcticus 307, complete genomeflagellar M-ring protein FliF5e-39162
NC_009253:2615777:2628811262881126303761566Desulfotomaculum reducens MI-1 chromosome, complete genomeflagellar MS-ring protein6e-39162
NC_007503:861668:8769758769758785611587Carboxydothermus hydrogenoformans Z-2901, complete genomeflagellar M-ring protein FliF1e-37158
NC_010718:1454087:1462715146271514642741560Natranaerobius thermophilus JW/NM-WN-LF, complete genomeflagellar M-ring protein FliF2e-35150
NC_015589:1240197:1267884126788412694431560Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeflagellar M-ring protein FliF2e-34147
NC_017297:2854934:2860865286086528624451581Clostridium botulinum F str. 230613 chromosome, complete genomefliF; flagellar M-ring protein FliF6e-34145
NC_010520:2860960:2874315287431528758951581Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar M-ring protein fliF7e-34145
NC_009698:2649453:2662793266279326643731581Clostridium botulinum A str. Hall chromosome, complete genomeflagellar MS-ring protein8e-34145
NC_009697:2714668:2725866272586627274461581Clostridium botulinum A str. ATCC 19397 chromosome, completeflagellar MS-ring protein8e-34145
NC_009092:1504363:1575039157503915767361698Shewanella loihica PV-4, complete genomeflagellar M-ring protein FliF6e-32139
NC_014032:3330596:3330596333059633321941599Salinibacter ruber M8 chromosome, complete genomeflagellar M-ring protein1e-31138
NC_017192:2469667:2479712247971224814301719Arcobacter sp. L, complete genomeflagellar M-ring protein FliF4e-31136
NC_006677:435652:4487984487984502461449Gluconobacter oxydans 621H, complete genomeflagellar M-ring protein7e-31135
NC_008593:1103293:1109668110966811112391572Clostridium novyi NT, complete genomeflagellar M-ring protein FliF3e-30134
NC_009850:1954969:1966540196654019682641725Arcobacter butzleri RM4018, complete genomeflagellar M-ring protein FliF8e-30132
NC_017187:1832045:1844748184474818464721725Arcobacter butzleri ED-1, complete genomeflagellar M-ring protein FliF9e-30132
NC_010723:833870:8366888366888382501563Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar M-ring protein FliF8e-29129
NC_010674:858397:8583978583978599591563Clostridium botulinum B str. Eklund 17B, complete genomeflagellar M-ring protein FliF5e-29129
NC_017294:1385576:1388876138887613904051530Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomeflagellar MS-ring protein3e-28127
NC_009617:4911595:4925973492597349275411569Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeflagellar MS-ring protein3e-28127
NC_015913:1422444:1422444142244414239731530Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeflagellar MS-ring protein FliF3e-28127
NC_009484:1627734:1638504163850416400661563Acidiphilium cryptum JF-5 chromosome, complete genomeflagellar M-ring protein FliF2e-27124
NC_015186:1698000:1708766170876617103281563Acidiphilium multivorum AIU301, complete genomeflagellar M-ring protein FliF2e-27124
NC_016012:1312352:1312352131235213138811530Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeflagellar MS-ring protein5e-27122
NC_015391:2059191:2087756208775620893301575Carnobacterium sp. 17-4 chromosome, complete genomeflagellar M-ring protein5e-26119
NC_020291:4903981:4937190493719049387611572Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar M-ring protein FliF5e-26119
NC_018664:1663324:1684116168411616856691554Clostridium acidurici 9a chromosome, complete genomeflagellar MS-ring protein FliF3e-23110
NC_008209:253663:2615182615182631401623Roseobacter denitrificans OCh 114, complete genomeflagellar M-ring protein FliF, putative3e-1790.5
NC_014721:434501:4513464513464530281683Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeflagellar m-ring protein flif7e-1789.4
NC_014652:628435:6360106360106376921683Caldicellulosiruptor hydrothermalis 108 chromosome, completeflagellar m-ring protein flif1e-1688.2
NC_009633:2725128:2738092273809227396451554Alkaliphilus metalliredigens QYMF chromosome, complete genomeflagellar M-ring protein FliF1e-1585.5
NC_003212:721112:7430637430637447151653Listeria innocua Clip11262, complete genomeflagellar M-ring protein4e-1377
NC_011660:1889504:1899816189981619014681653Listeria monocytogenes HCC23 chromosome, complete genomeflagellar MS-ring protein6e-1376.3
NC_002973:730942:7582747582747599261653Listeria monocytogenes str. 4b F2365, complete genomeflagellar M-ring protein7e-1375.9
NC_012488:732233:7522667522667539181653Listeria monocytogenes Clip81459, complete genomeflagellar MS-ring protein7e-1375.9
NC_013768:721897:7480097480097496611653Listeria monocytogenes 08-5923, complete genomeflagellar MS-ring protein9e-1375.9
NC_013766:757987:7813057813057829571653Listeria monocytogenes 08-5578 chromosome, complete genomeflagellar MS-ring protein9e-1375.9
NC_014376:3732547:3734301373430137359051605Clostridium saccharolyticum WM1 chromosome, complete genomeflagellar M-ring protein FliF1e-1275.5
NC_013891:640784:6525096525096541521644Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomeflagellar M-ring protein2e-1274.3
NC_011728:269853:3001483001483018571710Borrelia burgdorferi ZS7, complete genomeflagellar MS-ring protein3e-1273.9
NC_016011:678419:6972476972476988901644Listeria ivanovii subsp. ivanovii PAM 55, complete genomeputative flagellar basal-body M-ring protein FliF4e-1273.6
NC_010673:291679:3034643034643051701707Borrelia hermsii DAH, complete genomeflagellar M-ring protein FliF6e-1272.8
NC_008555:696217:7079697079697096211653Listeria welshimeri serovar 6b str. SLCC5334, complete genomeflagellar M-ring protein FliF6e-1272.8
NC_017238:272980:2998932998933016021710Borrelia afzelii PKo chromosome, complete genomeflagellar M-ring protein FliF8e-1272.4
NC_008710:277207:3027563027563044621707Borrelia turicatae 91E135, complete genomeflagellar M-ring protein FliF9e-1168.9
NC_009012:574145:5793185793185808711554Clostridium thermocellum ATCC 27405, complete genomeflagellar M-ring protein FliF2e-1067.8
NC_011244:319373:3226823226823243881707Borrelia recurrentis A1, complete genomeflagellar MS-ring protein5e-1066.6
NC_018604:1045774:1053096105309610547931698Brachyspira pilosicoli WesB complete genomeflagellar M-ring protein FliF1e-0862
NC_019908:982471:9944299944299961261698Brachyspira pilosicoli P43/6/78 chromosome, complete genomeflagellar MS-ring protein1e-0862
NC_014330:2268773:2276097227609722777851689Brachyspira pilosicoli 95/1000 chromosome, complete genomeflagellar M-ring protein FliF1e-0862
NC_017243:1229597:1236427123642712381301704Brachyspira intermedia PWS/A chromosome, complete genomeflagellar MS-ring protein2e-0861.6
NC_012225:787737:7988487988488004761629Brachyspira hyodysenteriae WA1, complete genomeflagellar MS-ring protein2e-0861.6
NC_018607:1803500:1813487181348718151841698Brachyspira pilosicoli B2904 chromosome, complete genomeflagellar M-ring protein FliF2e-0861.2
NC_014150:446359:4580114580114597141704Brachyspira murdochii DSM 12563 chromosome, complete genomeflagellar M-ring protein FliF1e-0758.9