Pre_GI: BLASTP Hits

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Query: NC_011149:3863913:3869196 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 3869196, End: 3870425, Length: 1230

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011745:149594:1556911556911567161026Escherichia coli ED1a chromosome, complete genome6e-37155
NC_011742:149732:1557331557331570221290Escherichia coli S88 chromosome, complete genomefimbrial-like adhesin protein1e-34147
NC_007946:149733:1557341557341570231290Escherichia coli UTI89, complete genomehypothetical fimbrial adhesin YadC precursor1e-34147
NC_008563:149709:1557101557101569751266Escherichia coli APEC O1, complete genomeputative fimbrial adhesin YadC precursor1e-34147
NC_004431:153907:1602351602351615241290Escherichia coli CFT073, complete genomeHypothetical fimbrial-like protein yadC precursor5e-33142
NC_000913:144577:1497151497151509531239Escherichia coli K12, complete genomepredicted fimbrial-like adhesin protein6e-31135
AC_000091:144577:1497151497151509531239Escherichia coli W3110 DNA, complete genomepredicted fimbrial-like adhesin protein6e-31135
NC_010473:118681:1238191238191250571239Escherichia coli str. K-12 substr. DH10B, complete genomepredicted fimbrial-like adhesin protein6e-31135
NC_012759:144576:1497141497141509521239Escherichia coli BW2952 chromosome, complete genomeputative fimbrial-like adhesin protein6e-31135
NC_011740:165363:1716861716861729721287Escherichia fergusonii ATCC 35469, complete genomeputative fimbrial-like adhesin exported protein6e-30132
NC_010498:153755:1600761600761613471272Escherichia coli SMS-3-5, complete genomeputative fimbrial protein2e-29130
CP002185:146389:1510221510221522961275Escherichia coli W, complete genomepredicted fimbrial-like adhesin protein4e-28125
NC_012967:145582:1525171525171538631347Escherichia coli B str. REL606 chromosome, complete genomeputative fimbrial-like adhesin protein5e-28125
NC_011741:145276:1499091499091512551347Escherichia coli IAI1 chromosome, complete genomeputative fimbrial-like adhesin protein5e-28125
CU928160:145276:1499091499091512551347Escherichia coli IAI1 chromosome, complete genomeputative exported protein, putative fimbrial-like adhesin protein5e-28125
NC_011415:146397:1510301510301523041275Escherichia coli SE11 chromosome, complete genomeputative fimbrial-like adhesin protein7e-28125
NC_009801:143426:1511321511321524061275Escherichia coli E24377A, complete genomefimbrial protein4e-28125
NC_011748:143755:1497671497671510411275Escherichia coli 55989, complete genomeputative fimbrial-like adhesin protein4e-28125
CP002516:3949061:3959607395960739608811275Escherichia coli KO11, complete genomeFimbrial protein domain-containing protein4e-28125
CU928145:143755:1497671497671510411275Escherichia coli 55989 chromosome, complete genomeputative exported protein, putative fimbrial-like adhesin protein4e-28125
AP010958:143358:1510641510641523381275Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative fimbrial-like protein yadC precursor4e-28125
NC_012947:3619384:3629930362993036312041275Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completefimbrial-like adhesin protein4e-28125
NC_013353:143358:1510641510641523381275Escherichia coli O103:H2 str. 12009, complete genomefimbrial-like protein yadC precursor4e-28125
NC_016902:3949061:3959607395960739608811275Escherichia coli KO11FL chromosome, complete genomefimbrial protein domain-containing protein4e-28125
NC_013361:145461:152396152396152896501Escherichia coli O26:H11 str. 11368 chromosome, complete genome6e-2099
NC_013364:143492:151198151198151698501Escherichia coli O111:H- str. 11128, complete genome6e-2099
NC_008253:149693:155557155557156402846Escherichia coli 536, complete genomehypothetical protein4e-1479.7
NC_011750:156799:159860159860160291432Escherichia coli IAI39 chromosome, complete genome2e-1377.4
NC_008253:149693:155139155139155453315Escherichia coli 536, complete genomehypothetical protein5e-1272.4
NC_017047:3869350:388297838829783883886909Rahnella aquatilis HX2 chromosome, complete genomefimbrial protein domain-containing protein1e-0964.7
NC_015061:3801927:3815371381537138164951125Rahnella sp. Y9602 chromosome, complete genomeFimbrial protein domain-containing protein1e-0964.7
NC_011750:156799:161593161593162498906Escherichia coli IAI39 chromosome, complete genome9e-0961.6