Pre_GI: BLASTP Hits

Some Help

Query: NC_010001:3369500:3381012 Clostridium phytofermentans ISDg, complete genome

Start: 3381012, End: 3381287, Length: 276

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014376:3214222:322490332249033225172270Clostridium saccharolyticum WM1 chromosome, complete genomeprotein of unknown function DUF4481e-31134
NC_014387:1175927:118575911857591186016258Butyrivibrio proteoclasticus B316 chromosome 1, complete genomehypothetical protein3e-29127
NC_020291:1464500:146989214698921470158267Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomehypothetical protein6e-24109
NC_009698:2367171:239524823952482395520273Clostridium botulinum A str. Hall chromosome, complete genomehypothetical protein2e-22104
NC_009697:2394826:242290324229032423175273Clostridium botulinum A str. ATCC 19397 chromosome, completehypothetical protein2e-22104
NC_009495:2524000:255088025508802551152273Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehypothetical protein2e-22104
NC_010520:2585014:261363326136332613905273Clostridium botulinum A3 str. Loch Maree, complete genomehypothetical protein2e-22104
NC_012563:2721658:272539127253912725663273Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein2e-22104
NC_012658:2584355:260907626090762609348273Clostridium botulinum Ba4 str. 657 chromosome, complete genomehypothetical protein4e-22103
NC_010516:2511035:253910325391032539375273Clostridium botulinum B1 str. Okra, complete genomehypothetical protein4e-22103
NC_020134:1173000:117843311784331178717285Clostridium stercorarium subsp. stercorarium DSM 8532, completehypothetical protein3e-22103
NC_013216:3376186:339012533901253390394270Desulfotomaculum acetoxidans DSM 771, complete genomeprotein of unknown function DUF4487e-22102
NC_007907:2879568:288605828860582886327270Desulfitobacterium hafniense Y51, complete genomehypothetical protein8e-22102
NC_011830:3904034:391334539133453913614270Desulfitobacterium hafniense DCB-2, complete genomeprotein of unknown function DUF4488e-22102
NC_014152:1430156:144175814417581442054297Thermincola sp. JR, complete genomeprotein of unknown function DUF4481e-21101
NC_016627:2799453:282000728200072820282276Clostridium clariflavum DSM 19732 chromosome, complete genomeputative nucleic-acid-binding protein implicated in transcription termination3e-21100
NC_009253:2139379:215023821502382150504267Desulfotomaculum reducens MI-1 chromosome, complete genomehypothetical protein5e-2199.8
NC_013315:1370000:137824513782451378526282Clostridium difficile CD196 chromosome, complete genomehypothetical protein7e-2199.4
NC_017179:1378875:138802513880251388300276Clostridium difficile BI1, complete genomehypothetical protein7e-2199
NC_008262:1835613:185364918536491853915267Clostridium perfringens SM101, complete genomehypothetical protein1e-2098.2
NC_015589:1899329:191626919162691916535267Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehypothetical protein7e-2095.9
NC_011898:513835:522592522592522864273Clostridium cellulolyticum H10, complete genomeprotein of unknown function DUF4481e-1995.1
NC_014328:1405484:141178814117881412057270Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehypothetical protein3e-1994
NC_014657:944000:955570955570955854285Caldicellulosiruptor owensensis OL chromosome, complete genomehypothetical protein1e-1891.7
NC_019970:1343670:135379613537961354065270Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeputative nucleic-acid-binding protein implicated in transcription termination3e-1890.5
NC_017294:758992:778469778469778738270Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomehypothetical protein3e-1580.5
NC_014103:3985897:399790539979053998186282Bacillus megaterium DSM319 chromosome, complete genomehypothetical protein7e-1475.9
NC_017208:3816753:382724838272483827520273Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeputative cytoplasmic protein2e-1374.7
NC_011772:3787500:379761437976143797886273Bacillus cereus G9842, complete genomehypothetical protein3e-1373.9
NC_011658:3603009:361522336152233615495273Bacillus cereus AH187 chromosome, complete genomehypothetical protein4e-1373.6
NC_014335:3567931:357803135780313578303273Bacillus cereus biovar anthracis str. CI chromosome, completehypothetical protein4e-1373.6
NC_012472:3661912:367201236720123672284273Bacillus cereus 03BB102, complete genomehypothetical protein4e-1373.6
NC_007530:3616828:362730636273063627578273Bacillus anthracis str. 'Ames Ancestor', complete genomehypothetical protein4e-1373.6
NC_003997:3617000:362717936271793627451273Bacillus anthracis str. Ames, complete genomehypothetical protein4e-1373.6
NC_003909:3587695:359991035999103600182273Bacillus cereus ATCC 10987, complete genomehypothetical protein4e-1373.6
NC_014171:3701051:371115237111523711424273Bacillus thuringiensis BMB171 chromosome, complete genomehypothetical protein4e-1373.6
NC_011725:3821789:383189238318923832164273Bacillus cereus B4264 chromosome, complete genomehypothetical protein4e-1373.6
NC_011773:3651963:366206536620653662337273Bacillus cereus AH820 chromosome, complete genomehypothetical protein4e-1373.6
NC_011969:3549000:355918535591853559457273Bacillus cereus Q1 chromosome, complete genomehypothetical protein4e-1373.6
NC_012659:3617000:362720636272063627478273Bacillus anthracis str. A0248, complete genomehypothetical protein4e-1373.6
NC_008600:3643905:365400536540053654286282Bacillus thuringiensis str. Al Hakam, complete genomehypothetical protein3e-1373.6
NC_006274:3697255:370773237077323708013282Bacillus cereus E33L, complete genomehypothetical protein3e-1373.6
NC_005945:3615623:362787436278743628155282Bacillus anthracis str. Sterne, complete genomehypothetical protein3e-1373.6
NC_005957:3638750:364885036488503649131282Bacillus thuringiensis serovar konkukian str. 97-27, completehypothetical protein3e-1373.6
NC_004722:3777907:378800737880073788288282Bacillus cereus ATCC 14579, complete genomehypothetical Cytosolic Protein4e-1373.6
NC_017200:3655496:366890936689093669181273Bacillus thuringiensis serovar finitimus YBT-020 chromosome,hypothetical protein4e-1373.6
NC_016779:3579743:358984335898433590115273Bacillus cereus F837/76 chromosome, complete genomehypothetical protein4e-1373.6
NC_016771:3555506:356772035677203567992273Bacillus cereus NC7401, complete genomehypothetical protein4e-1373.6
NC_009674:2551759:256191625619162562197282Bacillus cytotoxicus NVH 391-98 chromosome, complete genomehypothetical protein1e-1271.6
NC_010184:3675424:368593736859373686209273Bacillus weihenstephanensis KBAB4, complete genomeprotein of unknown function DUF4482e-1271.2
NC_009782:1327340:133789113378911338175285Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein6e-1166.2
NC_002952:1291444:130199513019951302279285Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein6e-1166.2
NC_007622:1214629:122518012251801225464285Staphylococcus aureus RF122, complete genomehypothetical protein6e-1166.2
NC_017338:1234077:124232812423281242612285Staphylococcus aureus subsp. aureus JKD6159 chromosome, completehypothetical protein6e-1166.2
NC_017341:1291583:130213413021341302418285Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,hypothetical protein6e-1166.2
NC_008021:1374195:137737113773711377670300Streptococcus pyogenes MGAS9429, complete genomehypothetical cytosolic protein8e-1165.9
NC_008023:1398085:140126114012611401560300Streptococcus pyogenes MGAS2096, complete genomehypothetical cytosolic protein8e-1165.9
NC_007297:1379742:138291813829181383214297Streptococcus pyogenes MGAS5005, complete genomehypothetical cytosolic protein8e-1165.9
NC_021175:1597613:162081216208121621108297Streptococcus oligofermentans AS 1.3089, complete genomehypothetical protein2e-1064.3
NC_014727:1292213:131393313139331314232300Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,nucleic-acid-binding protein implicated in transcription termination3e-1063.9
NC_009009:1876367:189453318945331894829297Streptococcus sanguinis SK36, complete genomehypothetical protein4e-1063.5
NC_004461:921364:948628948628948912285Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein4e-1063.5
NC_017353:1699652:170925817092581709551294Staphylococcus lugdunensis N920143, complete genomehypothetical protein1e-0962
NC_007350:1551457:155622215562221556506285Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,hypothetical protein3e-0960.8
NC_005042:1480761:150632015063201506598279Prochlorococcus marinus subsp. marinus str. CCMP1375, completePredicted nucleic-acid-binding protein implicated in transcription termination9e-0958.9
NC_012121:897866:908499908499908783285Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein9e-0958.9
NC_013170:917177:921471921471921788318Cryptobacterium curtum DSM 15641, complete genomepredicted nucleic-acid-binding protein implicated in transcription termination3e-0857
NC_009004:1770497:177367817736781774004327Lactococcus lactis subsp. cremoris MG1363, complete genomeconserved hypothetical protein3e-0753.9
NC_008527:740060:758073758073758399327Lactococcus lactis subsp. cremoris SK11, complete genomePredicted nucleic-acid-binding protein implicated in transcription termination3e-0753.9
NC_010628:7128951:713941071394107139679270Nostoc punctiforme PCC 73102, complete genomeprotein of unknown function DUF4484e-0753.1
NC_009483:2201986:220314022031402203733594Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein6e-0752.8
NC_013939:1535071:154744415474441548028585Deferribacter desulfuricans SSM1, complete genomehypothetical protein1e-0652.4
NC_019771:3237000:324324332432433243515273Anabaena cylindrica PCC 7122, complete genomeprotein of unknown function DUF4489e-0752.4
NC_014501:5832879:584538458453845845659276Cyanothece sp. PCC 7822 chromosome, complete genomehypothetical protein9e-0752.4
NC_019757:5748432:576653857665385766807270Cylindrospermum stagnale PCC 7417, complete genomeputative nucleic-acid-binding protein implicated in transcription termination1e-0652
NC_010546:1853825:186323118632311863494264Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceDUF448-containing protein1e-0651.6
NC_014248:619500:626498626498626770273Nostoc azollae 0708 chromosome, complete genomehypothetical protein3e-0650.8
NC_011726:2793669:280232328023232802580258Cyanothece sp. PCC 8801, complete genomeprotein of unknown function DUF4484e-0650.1
NC_013161:3448966:345887834588783459135258Cyanothece sp. PCC 8802, complete genomeprotein of unknown function DUF4484e-0650.1
NC_008819:1531187:155661615566161556891276Prochlorococcus marinus str. NATL1A, complete genomePredicted nucleic-acid-binding protein implicated in transcription termination5e-0649.7
NC_013771:803042:821902821902822159258Cyanobacterium UCYN-A, complete genomepredicted nucleic-acid-binding protein implicated in transcription termination7e-0649.3