Pre_GI: BLASTP Hits

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Query: NC_008228:1404126:1413823 Pseudoalteromonas atlantica T6c, complete genome

Start: 1413823, End: 1414668, Length: 846

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015497:3739556:376112837611283761967840Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomepolysaccharide deactylase family protein, PEP-CTERM locus subfamily9e-155545
NC_018679:3197347:321537932153793216218840Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completepolysaccharide deacetylase4e-93341
NC_015572:1421782:145045514504551451321867Methylomonas methanica MC09 chromosome, complete genomepolysaccharide deactylase family protein, PEP-CTERM locus subfamily2e-90332
NC_014315:1956695:196060719606071961428822Nitrosococcus watsoni C-113 chromosome, complete genomepolysaccharide deactylase family protein3e-81301
NC_013960:3326955:333326233332623334101840Nitrosococcus halophilus Nc4 chromosome, complete genomepolysaccharide deactylase family protein, PEP-CTERM locus subfamily8e-80296
NC_020541:3156500:321777332177733218684912Rhodanobacter sp. 2APBS1, complete genomepolysaccharide deactylase family protein, PEP-CTERM locus subfamily2e-78292
NC_007298:2568851:259126325912632592102840Dechloromonas aromatica RCB, complete genomePolysaccharide deacetylase5e-76284
NC_015422:704500:718308718308719174867Alicycliphilus denitrificans K601 chromosome, complete genomepolysaccharide deactylase family protein1e-75283
NC_014910:755192:778981778981779847867Alicycliphilus denitrificans BC chromosome, complete genomepolysaccharide deactylase family protein, pep-cterm locus subfamily3e-75281
NC_008609:2643000:267289026728902673795906Pelobacter propionicus DSM 2379, complete genomepolysaccharide deacetylase1e-74280
NC_008789:1641774:164411616441161645021906Halorhodospira halophila SL1, complete genomepolysaccharide deacetylase1e-72273
NC_018868:1960542:200048920004892001361873Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomepolysaccharide deacetylase pda4C2e-72272
NC_007645:2779381:278976927897692790626858Hahella chejuensis KCTC 2396, complete genomepredicted xylanase/chitin deacetylase1e-71270
NC_014973:1992694:199269419926941993593900Geobacter sp. M18 chromosome, complete genomepolysaccharide deactylase family protein4e-70265
NC_010995:4083960:410826241082624109128867Cellvibrio japonicus Ueda107, complete genomepolysaccharide deacetylase, putative, pda4C3e-70265
NC_009483:2640403:273017127301712731052882Geobacter uraniireducens Rf4 chromosome, complete genomepolysaccharide deacetylase2e-67255
NC_011769:820521:825356825356826207852Desulfovibrio vulgaris str. 'Miyazaki F', complete genomepolysaccharide deactylase family protein, PEP-CTERM locus subfamily3e-67255
NC_011146:1998981:204586820458682046707840Geobacter bemidjiensis Bem, complete genomepolysaccharide deactylase family protein, PEP-CTERM locus subfamily3e-66252
NC_007517:2241104:224331222433122244154843Geobacter metallireducens GS-15, complete genomePolysaccharide deacetylase1e-64246
NC_014972:322056:330748330748331567820Desulfobulbus propionicus DSM 2032 chromosome, complete genome1e-55216
NC_019892:6801246:6808924680892468099911068Singulisphaera acidiphila DSM 18658 chromosome, complete genomepolysaccharide deactylase family protein, PEP-CTERM locus subfamily1e-55216
NC_008639:2968000:300207830020783002926849Chlorobium phaeobacteroides DSM 266, complete genomepolysaccharide deacetylase1e-49196
NC_012108:2220983:222606122260612226927867Desulfobacterium autotrophicum HRM2, complete genomepolysaccharide deacetylase family protein4e-49195
NC_003901:1947491:195498919549891955840852Methanosarcina mazei Go1, complete genomeputative polysaccharide deacetylase3e-43175
NC_020389:1683120:169151216915121692339828Methanosarcina mazei Tuc01, complete genomePolysaccharide deacetylase4e-42171
NC_009615:4425500:444425744442574445108852Parabacteroides distasonis ATCC 8503 chromosome, complete genomexylanase/chitin deacetylase1e-35150
NC_003552:1259356:1276872127687212785961725Methanosarcina acetivorans C2A, complete genomepolysaccharide deacetylase1e-1894
NC_011832:820658:855762855762856685924Candidatus Methanosphaerula palustris E1-9c, complete genomepolysaccharide deacetylase2e-1892.8
NC_020389:1117509:112107611210761121981906Methanosarcina mazei Tuc01, complete genomePolysaccharide deacetylase4e-1788.6
NC_013201:145973:145973145973146869897Halomicrobium mukohataei DSM 12286 plasmid pHmuk01, completepolysaccharide deacetylase3e-1479
NC_019970:1343670:134493613449361345643708Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeputative xylanase/chitin deacetylase5e-1375.1
NC_017955:3057592:305669930566993057595897Modestobacter marinus, complete genomepolysaccharide deacetylase4e-1272.4
NC_020995:1205524:1232636123263612341981563Enterococcus casseliflavus EC20, complete genomehypothetical protein6e-1271.2
NC_010002:2293670:229592822959282296803876Delftia acidovorans SPH-1, complete genomepolysaccharide deacetylase1e-1170.9
NC_015563:5162177:518298451829845183859876Delftia sp. Cs1-4 chromosome, complete genomepolysaccharide deacetylase9e-1270.9
NC_017179:3621306:363689736368973637661765Clostridium difficile BI1, complete genomepolysaccharide deacetylase1e-1170.5
NC_013315:3613288:362887936288793629643765Clostridium difficile CD196 chromosome, complete genomepolysaccharide deacetylase1e-1170.5
NC_009089:3782000:380325438032543804018765Clostridium difficile 630, complete genomeprobable polysaccharide deacetylase2e-1170.1
NC_011898:649000:652866652866653642777Clostridium cellulolyticum H10, complete genomepolysaccharide deacetylase2e-1170.1
NC_002927:2636694:263852926385292639383855Bordetella bronchiseptica RB50, complete genomehypothetical protein2e-1170.1
NC_014640:3808639:381335538133553814152798Achromobacter xylosoxidans A8 chromosome, complete genomepolysaccharide deacetylase8e-1167.8
NC_018681:5695343:571241557124155713284870Nocardia brasiliensis ATCC 700358 chromosome, complete genomepolysaccharide deacetylase3e-1065.9
NC_019978:686362:689294689294690064771Halobacteroides halobius DSM 5150, complete genomeputative xylanase/chitin deacetylase1e-0963.9
NC_009380:4184695:4200363420036342014991137Salinispora tropica CNB-440 chromosome, complete genomepolysaccharide deacetylase2e-0963.2
NC_010623:1871492:191206019120601912875816Burkholderia phymatum STM815 chromosome 2, complete sequencepolysaccharide deacetylase2e-0963.2
NC_011149:3187022:320846632084663209389924Salmonella enterica subsp. enterica serovar Agona str. SL483,polysaccharide deacetylase domain protein3e-0962.8
NC_003198:3126548:314803331480333148956924Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-0962.8
NC_004631:3112043:313352831335283134451924Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-0962.8
NC_016832:3100683:312216831221683123091924Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Polysaccharide deacetylase domain protein2e-0962.8
NC_012660:2143376:216172721617272162608882Pseudomonas fluorescens SBW25 chromosome, complete genomeputative polysaccharide deacetylase3e-0962.4
NC_011147:3075186:309668230966823097605924Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein4e-0962.4
NC_006511:3079512:310100831010083101931924Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein4e-0962.4
NC_009953:691686:709012709012709818807Salinispora arenicola CNS-205 chromosome, complete genomepolysaccharide deacetylase4e-0962.4
NC_019978:686362:690074690074690811738Halobacteroides halobius DSM 5150, complete genomeputative xylanase/chitin deacetylase5e-0962
NC_010337:2339056:2349954234995423509761023Heliobacterium modesticaldum Ice1, complete genomepolysaccharide deacetylase, putative5e-0961.6
NC_014829:178000:182377182377183135759Bacillus cellulosilyticus DSM 2522 chromosome, complete genomepolysaccharide deacetylase family sporulation protein PdaB7e-0961.2
NC_011958:1031592:106842910684291069331903Rhodobacter sphaeroides KD131 chromosome 2, complete genomePolysaccharide deacetylase1e-0860.8
NC_013411:2739989:275772527577252758339615Geobacillus sp. Y412MC61, complete genomepolysaccharide deacetylase1e-0860.8
NC_014915:1880748:189766318976631898277615Geobacillus sp. Y412MC52 chromosome, complete genomepolysaccharide deacetylase1e-0860.8
NC_014098:2109416:212754121275412128425885Bacillus tusciae DSM 2912 chromosome, complete genomepolysaccharide deacetylase1e-0860.8
NC_015761:2982000:299749029974902998413924Salmonella bongori NCTC 12419, complete genomehypothetical protein1e-0860.5
NC_018524:5066720:5069718506971850712921575Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomepolysaccharide deacetylase family protein2e-0860.1
NC_017506:3717261:372957637295763730442867Marinobacter adhaerens HP15 chromosome, complete genomepolysaccharide deacetylase family protein2e-0860.1
NC_004668:546142:5499765499765515261551Enterococcus faecalis V583, complete genomepolysaccharide deacetylase family protein2e-0859.7
NC_008010:222516:2359832359832371971215Deinococcus geothermalis DSM 11300 plasmid 1, complete sequencepolysaccharide deacetylase2e-0859.7
NC_014219:2875051:2897861289786128990631203Bacillus selenitireducens MLS10 chromosome, complete genomepolysaccharide deacetylase3e-0859.3
NC_019974:2889375:291822529182252919118894Natronococcus occultus SP4, complete genomeputative xylanase/chitin deacetylase3e-0859.3
NC_009380:725870:728026728026728853828Salinispora tropica CNB-440 chromosome, complete genomepolysaccharide deacetylase6e-0858.2
NC_020210:1275031:131125713112571312117861Geobacillus sp. GHH01, complete genomepolysaccharide deacetylase9e-0857.8
NC_016582:7946000:796321379632137964013801Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative deacetylase1e-0757.4
NC_004193:205278:212749212749213504756Oceanobacillus iheyensis HTE831, complete genomepolysaccharide deacetylase1e-0757.4
NC_014551:2510000:251139525113952512129735Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein1e-0757.4
UCMB5137:2054735:205801520580152058752738Bacillus atrophaeus UCMB-5137putative polysaccharide deacetylase1e-0757.4
NC_020272:1384525:140412214041221404856735Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein1e-0757.4
NC_009328:1867971:188145218814521882078627Geobacillus thermodenitrificans NG80-2 chromosome, complete genomexylanase/chitin deacetylase1e-0757.4
NC_011567:139598:143249143249144010762Anoxybacillus flavithermus WK1, complete genomePredicted xylanase/chitin deacetylase1e-0757
NC_013739:2106662:213531321353132136215903Conexibacter woesei DSM 14684, complete genomepolysaccharide deacetylase1e-0757
NC_008786:3915000:393196539319653932885921Verminephrobacter eiseniae EF01-2, complete genomepolysaccharide deacetylase2e-0756.6
NC_013216:3376186:337888433788843379771888Desulfotomaculum acetoxidans DSM 771, complete genomepolysaccharide deacetylase2e-0756.6
NC_008312:6072000:607467760746776075351675Trichodesmium erythraeum IMS101, complete genomepolysaccharide deacetylase3e-0755.8
NC_018524:5066720:507152150715215072228708Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomepolysaccharide deacetylase family protein5e-0755.5
NC_009725:2517428:251822925182292518963735Bacillus amyloliquefaciens FZB42, complete genomeputative polysaccharide deacetylase5e-0755.5
NC_015977:2565922:257905925790592579781723Roseburia hominis A2-183 chromosome, complete genomepolysaccharide deacetylase5e-0755.1
NC_004347:4302768:4326131432613143271351005Shewanella oneidensis MR-1, complete genomepolysaccharide deacetylase family protein5e-0755.1
NC_015425:718384:735063735063735812750Clostridium botulinum BKT015925 chromosome, complete genomeputative xylanase/chitin deacetylase5e-0755.1
NC_015660:3643370:364638236463823647110729Geobacillus thermoglucosidasius C56-YS93 chromosome, completepolysaccharide deacetylase7e-0754.7
NC_014924:2961970:298276129827612983537777Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomepolysaccharide deacetylase7e-0754.7
NC_014650:3589604:359136435913643592098735Geobacillus sp. Y4.1MC1 chromosome, complete genomepolysaccharide deacetylase6e-0754.7
NC_014639:2169277:216927721692772170068792Bacillus atrophaeus 1942 chromosome, complete genomepolysaccharide deacetylase2e-0653.5
CP002207:2169277:216927721692772170068792Bacillus atrophaeus 1942, complete genomeputative polysaccharide deacetylase2e-0653.5
NC_010794:303203:346415346415347200786Methylacidiphilum infernorum V4, complete genomePolysaccharide deacetylase family protein2e-0653.5
NC_014248:685656:685656685656686564909Nostoc azollae 0708 chromosome, complete genomepolysaccharide deacetylase2e-0653.1
NC_003888:4927170:4971401497140149736322232Streptomyces coelicolor A3(2), complete genomebi-functional transferase/deacetylase2e-0652.8
NC_004463:2158116:218475921847592185418660Bradyrhizobium japonicum USDA 110, complete genomede N-acatylase4e-0652.4
NC_017249:7993713:809256480925648093223660Bradyrhizobium japonicum USDA 6, complete genomechitooligosaccharide deacetylase, nodulation protein4e-0652.4
NC_012914:970000:9768889768889781831296Paenibacillus sp. JDR-2, complete genomepolysaccharide deacetylase3e-0652.4
NC_014551:809025:809025809025809816792Bacillus amyloliquefaciens DSM 7, complete genomeN-acetylmuramic acid deacetylase6e-0651.6
NC_017188:753039:753039753039753830792Bacillus amyloliquefaciens TA208 chromosome, complete genomeN-acetylmuramic acid deacetylase6e-0651.6
NC_017190:794820:794820794820795611792Bacillus amyloliquefaciens LL3 chromosome, complete genomeN-acetylmuramic acid deacetylase6e-0651.6
NC_017191:754453:754453754453755244792Bacillus amyloliquefaciens XH7 chromosome, complete genomeN-acetylmuramic acid deacetylase6e-0651.6
NC_003228:76140:856108561086224615Bacteroides fragilis NCTC 9343, complete genomeputative polysaccharide deacetylase6e-0651.6
NC_006347:70607:800788007880692615Bacteroides fragilis YCH46, complete genomepolysaccharide deacetylase6e-0651.6
NC_016776:66223:756937569376307615Bacteroides fragilis 638R, complete genomeputative polysaccharide deacetylase6e-0651.6
NC_017047:2079368:209035720903572091238882Rahnella aquatilis HX2 chromosome, complete genomeCyclic imide hydrolase5e-0651.6
NC_016612:5231065:527899252789925279873882Klebsiella oxytoca KCTC 1686 chromosome, complete genomeCyclic imide hydrolase5e-0651.6
NC_013524:1150725:115777111577711158577807Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomepolysaccharide deacetylase8e-0651.2