Pre_GI Gene

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Host: NC_004347 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004347:4302768 Shewanella oneidensis MR-1, complete genome

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
430276843042701503hypothetical proteinBLASTP
430453443061831650toxin secretion ABC transporter protein HlyB familyQuickGO ontologyBLASTP
430618643082702085ABC transporter ATP-bindingpermease proteinQuickGO ontologyBLASTP
430826343095881326HlyD family secretion proteinQuickGO ontologyBLASTP
4309601432466315063RTX toxin putativeQuickGO ontologyBLASTP
43191744319566393hypothetical protein
432479643260701275transporter putativeQuickGO ontologyBLASTP
432613143271351005polysaccharide deacetylase family proteinQuickGO ontologyBLASTP
43271324327776645hypothetical proteinBLASTP
432777643289121137N-ethylmaleimide reductase putativeQuickGO ontologyBLASTP
43290244329935912transcriptional regulator LysR familyQuickGO ontologyBLASTP
433001443318191806sensor histidine kinaseQuickGO ontologyBLASTP
43320214332629609DNA-binding response regulatorQuickGO ontologyBLASTP
43330734333654582hypothetical proteinBLASTP
433389943350771179flagellar biosynthesis protein putativeQuickGO ontologyBLASTP
43353314335855525ATP-dependent protease peptidase subunitQuickGO ontologyBLASTP
433587443371961323ATP-dependent protease ATP-binding subunitQuickGO ontologyBLASTP