Pre_GI: BLASTP Hits

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Query: NC_007952:1453000:1457863 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 1457863, End: 1458306, Length: 444

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009254:1116174:113925211392521139692441Burkholderia vietnamiensis G4 chromosome 3, complete sequenceprotein tyrosine phosphatase6e-34142
NC_012791:2052923:207702020770202077454435Variovorax paradoxus S110 chromosome 1, complete genomeprotein tyrosine phosphatase2e-32137
NC_016603:3181592:318379431837943184222429Acinetobacter calcoaceticus PHEA-2 chromosome, complete genomelow molecular weight protein-tyrosine-phosphatase5e-31132
NC_015376:965000:978423978423978857435Burkholderia gladioli BSR3 chromosome chromosome 2, completeprotein tyrosine phosphatase6e-31132
NC_014931:5088125:509801250980125098446435Variovorax paradoxus EPS chromosome, complete genomeprotein tyrosine phosphatase1e-30131
NC_015723:1486000:150927215092721509709438Cupriavidus necator N-1 chromosome 2, complete sequencelow molecular weight protein-tyrosine-phosphatase EpsP3e-29127
NC_011891:4931961:493305249330524933498447Anaeromyxobacter dehalogenans 2CP-1, complete genomeprotein tyrosine phosphatase3e-27120
NC_015458:3390674:339292133929213393364444Pusillimonas sp. T7-7 chromosome, complete genomeprotein tyrosine phosphatase5e-27119
NC_011145:4960940:496203149620314962477447Anaeromyxobacter sp. K, complete genomeprotein tyrosine phosphatase5e-27119
NC_010676:61098:704167041670868453Burkholderia phytofirmans PsJN chromosome 2, complete sequenceprotein tyrosine phosphatase7e-27119
NC_007760:4911181:491512449151244915570447Anaeromyxobacter dehalogenans 2CP-C, complete genometyrosine phosphatase2e-26118
NC_007348:2115152:214911921491192149607489Ralstonia eutropha JMP134 chromosome 2, complete sequenceLow molecular weight phosphotyrosine protein phosphatase2e-26117
NC_014500:1491660:150044815004481500882435Dickeya dadantii 3937 chromosome, complete genomeLow molecular weight protein-tyrosine-phosphatase wzb2e-25114
NC_007952:2812996:281712428171242817576453Burkholderia xenovorans LB400 chromosome 2, complete sequenceProtein tyrosine phosphatase5e-25112
NC_013364:2672837:270517927051792705628450Escherichia coli O111:H- str. 11128, complete genomeprotein-tyrosine-phosphatase8e-25112
NC_012214:1588573:159363715936371594071435Erwinia pyrifoliae Ep1/96, complete genomeAcid phosphatase Wzb (synonym for CpsI; similar to AmsI), involved in exopolysaccharid synthesis3e-24110
NC_020064:1547524:155646815564681556902435Serratia marcescens FGI94, complete genomeprotein-tyrosine-phosphatase4e-24110
NC_013421:3279499:330524833052483305682435Pectobacterium wasabiae WPP163, complete genomeprotein tyrosine phosphatase1e-23108
NC_012691:3126500:314602431460243146461438Tolumonas auensis DSM 9187, complete genomeprotein tyrosine phosphatase5e-23106
NC_015567:1660462:167762616776261678057432Serratia sp. AS9 chromosome, complete genomeprotein tyrosine phosphatase6e-23106
NC_015566:1659288:167761416776141678045432Serratia sp. AS12 chromosome, complete genomeprotein tyrosine phosphatase6e-23106
NC_004547:1600900:160911416091141609548435Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeprobable protein-tyrosine-phosphatase1e-22104
NC_009800:2156091:217478221747822175219438Escherichia coli HS, complete genomelow molecular weight phosphotyrosine protein phosphatase7e-22102
NC_012917:1506083:151429215142921514726435Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeprotein tyrosine phosphatase2e-21101
NC_016818:3887000:390749539074953907929435Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeprotein-tyrosine-phosphatase3e-21100
NC_013850:1658010:166820316682031668634432Klebsiella variicola At-22 chromosome, complete genomeprotein tyrosine phosphatase3e-21100
NC_008781:3365468:339523133952313395674444Polaromonas naphthalenivorans CJ2, complete genomeprotein tyrosine phosphatase7e-2199.4
NC_004757:2451919:246768424676842468073390Nitrosomonas europaea ATCC 19718, complete genomeLow molecular weight phosphotyrosine protein phosphatase1e-2099
NC_016613:221476:246164246164246607444Vibrio sp. EJY3 chromosome 1, complete sequencecytoplasmic phosphatase1e-2098.6
NC_014839:253961:263623263623264063441Pantoea sp. At-9b plasmid pPAT9B02, complete sequenceprotein tyrosine phosphatase1e-2098.2
NC_014121:1038554:104885510488551049304450Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeprotein-tyrosine-phosphatase2e-2097.8
NC_007489:42500:449904499045439450Rhodobacter sphaeroides 2.4.1 plasmid C, complete sequenceLow molecular weight phosphotyrosine protein phosphatase2e-2097.4
NC_012731:3500545:354054435405443540978435Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative protein tyrosine phosphatase4e-2096.7
NC_015061:3840463:389684638968463897280435Rahnella sp. Y9602 chromosome, complete genomeprotein tyrosine phosphatase1e-1995.5
NC_016818:3851542:386686938668693867318450Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeprotein-tyrosine-phosphatase2e-1994.7
NC_014924:3270547:327622932762293276669441Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeprotein tyrosine phosphatase2e-1994.7
NC_015061:3840463:385514538551453855594450Rahnella sp. Y9602 chromosome, complete genomeprotein tyrosine phosphatase2e-1994.4
NC_008570:3220539:323343332334333233861429Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeLow molecular weight protein-tyrosine-phosphatase ptp3e-1994
NC_016602:103878:141496141496141936441Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceprotein-tyrosine-phosphatase3e-1993.6
NC_014121:3483976:350708335070833507532450Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completephosphotyrosine-protein phosphatase5e-1993.2
NC_005139:343500:345845345845346285441Vibrio vulnificus YJ016 chromosome I, complete sequencecytoplasmic phosphatase7e-1992.8
NC_007712:1601499:161314516131451613573429Sodalis glossinidius str. 'morsitans', complete genomeputative tyrosine-phosphatase1e-1892
NC_009832:1719149:172871817287181729152435Serratia proteamaculans 568, complete genomeprotein tyrosine phosphatase2e-1891.3
NC_011566:1597751:161902616190261619472447Shewanella piezotolerans WP3, complete genomeCytoplasmic phosphatase3e-1890.5
NC_014355:2775979:279370827937082794238531Candidatus Nitrospira defluvii, complete genomelow molecular weight protein-tyrosine-phosphatase Wzb2e-1787.8
NC_011753:206178:207434207434207874441Vibrio splendidus LGP32 chromosome 1, complete genomeputative tyrosine-phosphatase (wzb)5e-1786.3
NC_015633:461143:464779464779465219441Vibrio anguillarum 775 chromosome chromosome I, complete sequenceprotein tyrosine phosphatase2e-1684.7
NC_009633:365325:376869376869377348480Alkaliphilus metalliredigens QYMF chromosome, complete genomeprotein tyrosine phosphatase3e-1684
NC_015520:55710:557105571056177468Mahella australiensis 50-1 BON chromosome, complete genomeprotein tyrosine phosphatase2e-1581.3
NC_019903:3537545:354790935479093548355447Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,protein-tyrosine-phosphatase2e-1477.4
NC_009922:2766397:277378427737842774308525Alkaliphilus oremlandii OhILAs, complete genomeprotein tyrosine phosphatase7e-1372.8
NC_010623:188143:204356204356204793438Burkholderia phymatum STM815 chromosome 2, complete sequenceprotein tyrosine phosphatase8e-1372.4
NC_010001:4586000:459711045971104597565456Clostridium phytofermentans ISDg, complete genomeprotein tyrosine phosphatase1e-1168.2
NC_017200:5149528:516675751667575167197441Bacillus thuringiensis serovar finitimus YBT-020 chromosome,low molecular weight phosphotyrosine protein phosphatase family protein2e-1168.2
NC_011969:4993386:502683150268315027271441Bacillus cereus Q1 chromosome, complete genomelow molecular weight phosphotyrosine protein phosphatase family protein2e-1167.8
NC_017047:3936624:395852139585213958904384Rahnella aquatilis HX2 chromosome, complete genomeprotein tyrosine phosphatase3e-1167.4
NC_003909:4996783:502759150275915028031441Bacillus cereus ATCC 10987, complete genomelow molecular weight phosphotyrosine protein phosphatase family protein4e-1167
NC_011772:5158680:518929951892995189739441Bacillus cereus G9842, complete genomelow molecular weight phosphotyrosine protein phosphatase family protein5e-1166.6
NC_016779:5009320:504238250423825042822441Bacillus cereus F837/76 chromosome, complete genomeLow molecular weight protein tyrosine phosphatase1e-1065.1
NC_011773:5091609:510870251087025109142441Bacillus cereus AH820 chromosome, complete genomelow molecular weight phosphotyrosine protein phosphatase family protein1e-1065.1
NC_008600:5046000:507774050777405078180441Bacillus thuringiensis str. Al Hakam, complete genomeprotein tyrosine phosphatase1e-1065.1
NC_015633:2327500:234836723483672348894528Vibrio anguillarum 775 chromosome chromosome I, complete sequenceprotein tyrosine phosphatase1e-1065.1
NC_004722:5194000:522736452273645227804441Bacillus cereus ATCC 14579, complete genomeProtein tyrosine phosphatase2e-1064.3
NC_011725:5201995:523534252353425235782441Bacillus cereus B4264 chromosome, complete genomelow molecular weight phosphotyrosine protein phosphatase2e-1064.3
NC_014171:5107956:513922051392205139660441Bacillus thuringiensis BMB171 chromosome, complete genomeprotein tyrosine phosphatase2e-1064.3
NC_005957:5037499:505371850537185054158441Bacillus thuringiensis serovar konkukian str. 97-27, completeprotein tyrosine phosphatase2e-1065.1
NC_013530:3204825:323122832312283231782555Xylanimonas cellulosilytica DSM 15894, complete genomeprotein tyrosine phosphatase3e-1063.9
NC_007530:5033095:504901850490185049458441Bacillus anthracis str. 'Ames Ancestor', complete genomelow molecular weight phosphotyrosine protein phosphatase family protein4e-1063.5
NC_003997:5032969:504889250488925049332441Bacillus anthracis str. Ames, complete genomelow molecular weight phosphotyrosine protein phosphatase family protein4e-1063.5
NC_012659:5031827:504891850489185049358441Bacillus anthracis str. A0248, complete genomelow molecular weight phosphotyrosine protein phosphatase family protein4e-1063.5
NC_013174:23421:443384433844967630Jonesia denitrificans DSM 20603, complete genomeprotein tyrosine phosphatase5e-1063.5
NC_014814:4235477:424684842468484247381534Mycobacterium sp. Spyr1 chromosome, complete genomeprotein-tyrosine-phosphatase7e-1062.8
NC_017218:534699:536669536669537274606Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeputative low molecular weight protein-tyrosine-phosphatase8e-1062.4
NC_003888:4314389:431672243167224317216495Streptomyces coelicolor A3(2), complete genomelow molecular weight protein-tyrosine-phosphatase8e-1062.4
NC_004369:371109:391090391090391737648Corynebacterium efficiens YS-314, complete genomeputative protein tyrosine phosphatase4e-0960.5
NC_018720:1611213:163069316306931631232540Bifidobacterium asteroides PRL2011 chromosome, complete genomelow molecular weight protein-tyrosine-phosphatase7e-0959.3
NC_011593:2288993:233223423322342332839606Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,protein tyrosine phosphatase1e-0858.9
NC_006958:359760:365251365251365856606Corynebacterium glutamicum ATCC 13032, complete genomeLow molecular weight phosphotyrosine protein phosp1e-0858.9
NC_003450:359759:365250365250365855606Corynebacterium glutamicum ATCC 13032, complete genomeprotein-tyrosine-phosphatase1e-0858.9
NC_013422:1755875:179920917992091799694486Halothiobacillus neapolitanus c2, complete genomeprotein tyrosine phosphatase1e-0858.5
NC_015555:2259500:228992222899222290371450Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeprotein tyrosine phosphatase2e-0858.2
NC_007516:413159:416554416554417030477Synechococcus sp. CC9605, complete genomeprotein tyrosine phosphatase3e-0857
NC_012815:1603916:165223616522361652802567Bifidobacterium animalis subsp. lactis DSM 10140, complete genomehypothetical protein3e-0857.4
NC_012814:1599241:165251816525181653084567Bifidobacterium animalis subsp. lactis Bl-04, complete genomehypothetical protein3e-0857.4
NC_011835:733320:783445783445784011567Bifidobacterium animalis subsp. lactis AD011 chromosome, completeprotein-tyrosine-phosphatase3e-0857.4
NC_017214:299637:349724349724350290567Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeProtein tyrosine phosphatase3e-0857.4
NC_017215:1605917:165713916571391657705567Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,protein-tyrosine-phosphatase3e-0857.4
NC_017216:1603000:165216416521641652730567Bifidobacterium animalis subsp. lactis BLC1, complete genomeLow molecular weight phosphotyrosine protein phosphatase domain protein3e-0857.4
NC_017217:1607679:165780516578051658371567Bifidobacterium animalis subsp. lactis V9 chromosome, completehypothetical protein3e-0857.4
NC_004757:1926074:193018919301891930689501Nitrosomonas europaea ATCC 19718, complete genomeLow molecular weight phosphotyrosine protein phosphatase3e-0857.4
NC_009483:2640403:270422227042222704698477Geobacter uraniireducens Rf4 chromosome, complete genomeprotein tyrosine phosphatase4e-0857
NC_009482:1761529:178820417882041788677474Synechococcus sp. RCC307 chromosome, complete genomelow molecular weight protein-tyrosine-phosphatase4e-0857
NC_002745:2152000:216594621659462166365420Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein8e-0855.8
NC_003923:2178000:219258921925892193008420Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein8e-0855.8
NC_002952:2256000:227030522703052270724420Staphylococcus aureus subsp. aureus MRSA252, complete genomeputative low molecular weight protein-tyrosine-phosphatase8e-0855.8
NC_007795:2163706:217821021782102178629420Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehypothetical protein8e-0855.8
NC_002953:2157781:217169421716942172113420Staphylococcus aureus subsp. aureus MSSA476, complete genomeputative low molecular weight protein-tyrosine-phosphatase8e-0855.8
NC_009782:2230000:224401622440162244435420Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein8e-0855.8
NC_007793:2217872:223128822312882231707420Staphylococcus aureus subsp. aureus USA300, complete genomehypothetical protein8e-0855.8
NC_002758:2227874:224237822423782242797420Staphylococcus aureus subsp. aureus Mu50, complete genomesimilar to phosphatase8e-0855.8
NC_009077:1027357:104779410477941048297504Mycobacterium sp. JLS, complete genomeprotein tyrosine phosphatase8e-0855.8
NC_007622:2117188:213009221300922130511420Staphylococcus aureus RF122, complete genomehypothetical protein8e-0855.8
NC_002951:2153571:216748621674862167905420Staphylococcus aureus subsp. aureus COL, complete genomephosphotyrosine protein phosphatase8e-0855.8
NC_017351:2199644:221417922141792214598420Staphylococcus aureus subsp. aureus 11819-97 chromosome, completelow molecular weight protein-tyrosine-phosphatase ptpB8e-0855.8
NC_017342:1147517:115054311505431150962420Staphylococcus aureus subsp. aureus TCH60 chromosome, completeprotein-tyrosine-phosphatase8e-0855.8
NC_017341:2247696:226161122616112262030420Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,putative low molecular weight protein-tyrosine-phosphatase8e-0855.8
NC_017337:2186449:220238222023822202801420Staphylococcus aureus subsp. aureus ED133 chromosome, completehypothetical protein8e-0855.8
NC_016928:2121919:213570721357072136126420Staphylococcus aureus subsp. aureus M013 chromosome, completeLow molecular weight protein tyrosinephosphatase8e-0855.8
NC_016912:2035589:204950420495042049923420Staphylococcus aureus subsp. aureus VC40 chromosome, completeLow molecular weight protein-tyrosine-phosphatase ptpB8e-0855.8
NC_009641:2221891:223586922358692236288420Staphylococcus aureus subsp. aureus str. Newman chromosome,low molecular weight protein-tyrosine-phosphatase8e-0855.8
NC_009632:2257764:227226822722682272687420Staphylococcus aureus subsp. aureus JH1 chromosome, completelow molecular weight phosphotyrosine protein phosphatase8e-0855.8
NC_009487:2257889:227239322723932272812420Staphylococcus aureus subsp. aureus JH9 chromosome, completeprotein tyrosine phosphatase8e-0855.8
NC_015563:5289875:529687852968785297342465Delftia sp. Cs1-4 chromosome, complete genomeprotein tyrosine phosphatase9e-0855.8
NC_014151:813755:818069818069818656588Cellulomonas flavigena DSM 20109 chromosome, complete genomeprotein tyrosine phosphatase9e-0855.8
NC_008618:1704462:171436917143691714905537Bifidobacterium adolescentis ATCC 15703, complete genomehypothetical protein9e-0855.8
NC_012660:4149487:416562241656224166086465Pseudomonas fluorescens SBW25 chromosome, complete genomelow molecular weight phosphotyrosine protein phosphatase1e-0755.1
NC_019673:967559:973571973571974098528Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-0755.1
NC_014973:1992694:200645520064552007006552Geobacter sp. M18 chromosome, complete genomeprotein tyrosine phosphatase2e-0754.7
NC_007513:1807184:182907318290731829552480Synechococcus sp. CC9902, complete genomeprotein tyrosine phosphatase3e-0754.3
NC_009921:2565640:257035925703592571036678Frankia sp. EAN1pec, complete genomeprotein tyrosine phosphatase3e-0753.9
NC_009338:5052000:506808750680875068611525Mycobacterium gilvum PYR-GCK chromosome, complete genomeprotein tyrosine phosphatase4e-0753.5
NC_007645:2779381:279894127989412799462522Hahella chejuensis KCTC 2396, complete genomeProtein-tyrosine-phosphatase4e-0753.5
NC_014829:4392799:440373644037364404353618Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeprotein tyrosine phosphatase8e-0752.4
NC_014550:2835696:285453028545302855039510Arthrobacter arilaitensis Re117, complete genomelow molecular weight protein-tyrosine-phosphatase8e-0752.8
NC_019970:2551607:256177725617772562217441Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeprotein-tyrosine-phosphatase9e-0752.4
NC_008699:4443000:4444114444411444461262013Nocardioides sp. JS614, complete genomeadenylylsulfate kinase9e-0752.4
NC_005070:1898612:192448819244881924964477Synechococcus sp. WH 8102, complete genomeputative low molecular weight protein-tyrosine-phosphatase2e-0651.6
NC_013440:3870697:388703438870343887897864Haliangium ochraceum DSM 14365, complete genomeProtein-tyrosine phosphatase, low molecular weight6e-0649.7