Pre_GI Gene

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Host: NC_005070 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_005070:1898612 Synechococcus sp. WH 8102, complete genome

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: This strain is a motile strain that can be grown in both natural and artificial seawater liquid media. It was isolated from the tropical Atlantic ocean in 1981. The genome contains evidence of many phage integration events and analysis of the metabolic pathways show that this organism is capable of a more nutritionally diverse lifestyle than that of Prochlorococcus.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
18986121899016405hypothetical proteinBLASTP
18991451899813669hypothetical proteinBLASTP
18999241900355432hypothetical proteinBLASTP
19003551900927573possible Phycobilisome polypeptideQuickGO ontologyBLASTP
19009991901757759possible phycobilisome rod-core linker polypeptide L-RC 285QuickGO ontologyBLASTP
19017591902472714hypothetical proteinBLASTP
19026511903535885phycobilisome linker polypeptideQuickGO ontologyBLASTP
190359119052371647Phycobilisome linker polypeptideQuickGO ontologyBLASTP
19053121906046735possible phycobilisome linker polypeptideQuickGO ontologyBLASTP
19063071906870564conserved hypothetical protein CpeSQuickGO ontologyBLASTP
19068791907493615CpeT homologQuickGO ontologyBLASTP
19074971907802306CpeR homolog phycoerythrin linker-proteins regionQuickGO ontologyBLASTP
19080841908374291hypothetical proteinBLASTP
19083681908736369hypothetical proteinBLASTP
190892819101241197similar to cpeYQuickGO ontologyBLASTP
19102961910832537C-phycoerythrin class II beta chainQuickGO ontologyBLASTP
19108791911376498C-phycoerythrin class II alpha chainQuickGO ontologyBLASTP
19117411912622882C-phycoerythrin class II gamma chain linker polypeptideQuickGO ontologyBLASTP
19127881913693906bilin biosynthesis protein MpeU PBS lyase HEAT-like repeatQuickGO ontologyBLASTP
19142081914828621putative bilin biosynthesis protein cpeZQuickGO ontologyBLASTP
191492119162461326putative bilin biosynthesis protein CpeYQuickGO ontologyBLASTP
19163791916729351hypothetical protein
19167301917161432hypothetical proteinBLASTP
19172881917782495C-phycoerythrin class I alpha chainQuickGO ontologyBLASTP
19178411918395555C-phycoerythrin class I beta chainQuickGO ontologyBLASTP
19183831918874492hypothetical protein
19189981919612615hypothetical proteinBLASTP
191961819203257081516 dihydrobiliverdinferredoxin oxidoreductaseQuickGO ontologyBLASTP
19203221921110789phycoerythrobilinferredoxin oxidoreductaseQuickGO ontologyBLASTP
19212691921787519R-phycocyanin II beta chainQuickGO ontologyBLASTP
19218301922318489R-phycocyanin II alpha chainQuickGO ontologyBLASTP
19223971922990594hypothetical proteinBLASTP
192308219244821401putative phycocyanobilin lyase alpha and beta fusion proteinQuickGO ontologyBLASTP
19244881924964477putative low molecular weight protein-tyrosine-phosphataseQuickGO ontologyBLASTP
192494819264531506putative bifunctional enzyme pantothenate synthetasecytidylate kinaseQuickGO ontologyBLASTP
19264621927085624possible rare lipoprotein AQuickGO ontologyBLASTP
192739119284221032phosphoribosylaminoimidazole synthetaseQuickGO ontologyBLASTP
19285541929186633hypothetical proteinBLASTP