Pre_GI Gene

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Host: NC_007952 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007952:2812996 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
28129962813715720hypothetical proteinBLASTP
28138092814057249hypothetical protein
281439228158191428Undecaprenyl-phosphate galactosephosphotransferaseQuickGO ontologyBLASTP
281607528171271053putative polysaccharide export outer membrane protein epsAQuickGO ontologyBLASTP
28171242817576453Protein tyrosine phosphataseQuickGO ontologyBLASTP
281763328198552223Exopolysaccharide transport proteinputative tyrosine protein kinaseQuickGO ontologyBLASTP
282002228212601239NDP-N-acetyl-D-galactosaminuronic acid dehydrogenaseQuickGO ontologyBLASTP
282128428225911308hypothetical proteinBLASTP
282258828238471260hypothetical proteinBLASTP
282384428249351092putative glycosyltransferaseQuickGO ontologyBLASTP
28249772825255279hypothetical protein
282572628269341209hypothetical proteinBLASTP
28269312827689759Glycosyl transferase WecBTagACpsFQuickGO ontologyBLASTP
282777628288311056Putative diguanylate phosphodiesterase EAL domainQuickGO ontologyBLASTP
28290782829422345hypothetical protein
282952228309161395Histidine KinaseQuickGO ontologyBLASTP
28309062831583678Two component transcriptional regulator winged helix familyQuickGO ontologyBLASTP
283185628328751020ABC nitratesulfonatebicarbonate family transporter periplasmic ligand binding proteinQuickGO ontologyBLASTP
28329182833712795ABC nitratesulfonatebicarbonate family transporter ATPase subunitQuickGO ontologyBLASTP
28337292834592864ABC nitratesulfonatebicarbonate family transporter inner membrane subunitQuickGO ontologyBLASTP
283495028363831434putative TPR repeat proteinQuickGO ontologyBLASTP