Pre_GI Gene

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Host: NC_009482 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009482:1761529 Synechococcus sp. RCC307 chromosome, complete genome

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: Marine Synechococcus and Prochlorococcus are the most abundant photosynthetic organisms on earth and between them account for about half of the world's photosynthesis. RCC307 is an oceanic Synechococcus strain which presents great phylogenetic interest because trees obtained using its 16S RNA gene seem to indicate that it is rooted at the base of the radiation of marine cyanobacteria. This strain was isolated from seawater taken at a depth of 15 meters from the Mediterranean Sea.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
176024017615321293small-conductance mechanosensitive channelQuickGO ontologyBLASTP
176152917627701242ABC transporter substrate-binding proteinQuickGO ontologyBLASTP
17628021763206405hypothetical protein
17633081763913606hypothetical proteinBLASTP
17639471764399453hypothetical proteinBLASTP
17643961764986591allophycocyanin-like proteinQuickGO ontologyBLASTP
17650511765824774phycobilisome rod-core linker polypeptide CpcG L-RC 285QuickGO ontologyBLASTP
17658351766509675hypothetical proteinBLASTP
17666261767504879phycobilisome linker polypeptide C-phycoerythrin class I-associatedQuickGO ontologyBLASTP
176756017692001641phycobilisome linker polypeptide C-phycoerythrin class I and II-associatedQuickGO ontologyBLASTP
17692821770016735phycobilisome linker polypeptide C-phycoerythrin class I-associatedQuickGO ontologyBLASTP
17700471770580534hypothetical proteinBLASTP
17705891771215627hypothetical proteinBLASTP
17712161771521306C-phycoerythrin operon regulator CpeRQuickGO ontologyBLASTP
17715281771767240hypothetical proteinBLASTP
17717851772081297hypothetical proteinBLASTP
17720851772405321hypothetical proteinBLASTP
177254817737441197bilin biosynthesis protein CpeYQuickGO ontologyBLASTP
17739321774468537C-phycoerythrin class II beta chainQuickGO ontologyBLASTP
17745111775008498C-phycoerythrin class II alpha chainQuickGO ontologyBLASTP
17753761776257882C-phycoerythrin class II gamma chain linkerQuickGO ontologyBLASTP
17764021777298897bilin biosynthesis protein MpeUQuickGO ontologyBLASTP
17773041777921618bilin biosynthesis protein CpeZQuickGO ontologyBLASTP
177800917793341326bilin biosynthesis protein CpeYQuickGO ontologyBLASTP
17794791779802324hypothetical protein
17798231780251429hypothetical proteinBLASTP
17803111781225915bilin biosynthesis protein MpeVQuickGO ontologyBLASTP
17813621781856495C-phycoerythrin class I alpha chainQuickGO ontologyBLASTP
17819091782463555C-phycoerythrin class I beta chainQuickGO ontologyBLASTP
17827511782984234hypothetical proteinBLASTP
17830121783620609hypothetical proteinBLASTP
17836241784325702dihydrobiliverdinferredoxin oxidoreductaseQuickGO ontologyBLASTP
17843221785110789phycoerythrobilinferredoxin oxidoreductaseQuickGO ontologyBLASTP
17853171785835519R-phycocyanin II beta chainQuickGO ontologyBLASTP
17858781786366489R-phycocyanin II alpha chainQuickGO ontologyBLASTP
17864511786672222hypothetical protein
17867301787554825phycobilin lyase subunit alphaQuickGO ontologyBLASTP
17875511788207657phycobilin lyase subunit betaQuickGO ontologyBLASTP
17882041788677474low molecular weight protein-tyrosine-phosphataseQuickGO ontologyBLASTP
178866117901991539bifunctional pantoate ligasecytidylate kinaseQuickGO ontologyBLASTP
17902251790758534rare lipoprotein AQuickGO ontologyBLASTP
179108817921221035phosphoribosylaminoimidazole synthetaseQuickGO ontologyBLASTP
17921901792801612hypothetical proteinBLASTP
17927851792976192hypothetical protein
17929761793947972oxidoreductaseQuickGO ontologyBLASTP
17939461794128183hypothetical proteinBLASTP