Pre_GI Gene

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Host: NC_017216 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017216:1603000 Bifidobacterium animalis subsp. lactis BLC1, complete genome

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium animalis and Bifidobacterium lactis were originally considered to be separate species. Recent studies evaluating the DNA relatedness and phenotypic similarities of these species has determined that they represent a single species.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
16030431603666624ADP-ribose pyrophosphataseQuickGO ontologyBLASTP
16038431604238396thioredoxinQuickGO ontologyBLASTP
160453916055971059hypothetical proteinBLASTP
160587416075201647undecaprenyl-phosphate sugar phosphotransferaseQuickGO ontologyBLASTP
16077471608196450hypothetical proteinBLASTP
160860816100471440hypothetical proteinBLASTP
161003116110381008glycosyl transferase family 2QuickGO ontologyBLASTP
161111616130051890hypothetical proteinBLASTP
16131491614039891glucose-1-phosphate thymidylyltransferaseQuickGO ontologyBLASTP
161405316155041452dTDP-4-dehydrorhamnose 35-epimerasedTDP-4-dehydrorhamnose reductaseQuickGO ontologyBLASTP
161557916165981020dTDP-D-glucose 46-dehydrataseQuickGO ontologyBLASTP
16167541617719966glycosyl transferase family 2QuickGO ontologyBLASTP
161772116191721452Polysaccharide biosynthesis protein flippase WzxQuickGO ontologyBLASTP
16191981620085888glycosyl transferase family 2QuickGO ontologyBLASTP
162010416211171014glycosyl transferase family 2QuickGO ontologyBLASTP
162111016224561347hypothetical proteinBLASTP
16224531623346894glycosyl transferase family 2QuickGO ontologyBLASTP
16233591624123765exopolysaccharide biosynthesis proteinQuickGO ontologyBLASTP
16241281625012885glycosyl transferase family 2QuickGO ontologyBLASTP
16251651626097933capsular polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
162616216274091248UDP-glucose 6-dehydrogenaseQuickGO ontologyBLASTP
162753016289661437LPS biosynthesis related flippase WzxQuickGO ontologyBLASTP
162901416300181005hypothetical proteinBLASTP
16300711630934864glycosyl transferase group 2 family proteinQuickGO ontologyBLASTP
163102816325631536galactosyl transferase CpsDQuickGO ontologyBLASTP
16328401633181342hypothetical proteinBLASTP
163325416349781725MFS family major facilitator transporterQuickGO ontologyBLASTP
163511716364751359H-stimulated manganese uptake system proteinQuickGO ontologyBLASTP
16365791637307729hypothetical proteinBLASTP
16374661638341876pyridoxal biosynthesis lyase PdxSQuickGO ontologyBLASTP
16383681639018651glutamine amidotransferase subunit PdxTQuickGO ontologyBLASTP
163936116404971137NAD-dependent epimerasedehydrataseQuickGO ontologyBLASTP
16406021641066465polysaccharide biosynthesis protein CpsFQuickGO ontologyBLASTP
16410661641566501glycosyltransferase 28-like proteinQuickGO ontologyBLASTP
16416441642597954glycosyltransferase group 2 family proteinQuickGO ontologyBLASTP
16425901643426837glycosyltransferase group 2 family proteinQuickGO ontologyBLASTP
164361216447451134hypothetical proteinBLASTP
164487016484513582ABC-type transporter putative CysteineGlutathione exporter CydDCQuickGO ontologyBLASTP
164869316505131821long-chain-fatty acid CoA ligaseQuickGO ontologyBLASTP
165058816519761389Maf-likeNUDIX hydrolase fusion proteinQuickGO ontologyBLASTP
16521641652730567Low molecular weight phosphotyrosine protein phosphatase domain proteinQuickGO ontologyBLASTP
165281516544701656hypothetical proteinBLASTP
165471016561821473lipopolysaccharide lps biosynthesis Chain length determinant proteinQuickGO ontologyBLASTP
16570711657925855hypothetical proteinBLASTP