Pre_GI: BLASTN Hits

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Query: NC_017218:273503 Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genome

Start: 273503, End: 293099, Length: 19597

Host Lineage: Bifidobacterium breve; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is one of the first colonizers of the human gastrointestinal tract, and is a dominant member of the adult intestinal microbial community. Probiotics are live microbial supplements which benefit the health of an animal by maintaining normal microbial flora, producing vitamins, and stimulating the mucosal immune system




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008618:17297391729739176070830970Bifidobacterium adolescentis ATCC 15703, complete genome0722BLASTN svgBLASTP svg
NC_015052:47194447194450736635423Bifidobacterium longum subsp. infantis 157F, complete genome0686BLASTN svgBLASTP svg
NC_013714:2350749*2350749237219321445Bifidobacterium dentium Bd1, complete genome1e-35159BLASTN svgBLASTP svg
NC_014815:2639339*2639339265728817950Micromonospora sp. L5 chromosome, complete genome2e-22115BLASTN svgBLASTP svg
NC_010572:45054284505428452522719800Streptomyces griseus subsp. griseus NBRC 13350, complete genome3e-21111BLASTN svgBLASTP svg
NC_013729:380312*38031240421723906Kribbella flavida DSM 17836, complete genome2e-19105BLASTN svgBLASTP svg
NC_014039:26112626112628731726192Propionibacterium acnes SK137 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_006085:23412723412725583521709Propionibacterium acnes KPA171202, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_015671:31533253153325317759924275Cellvibrio gilvus ATCC 13127 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_007333:39579395797952139943Thermobifida fusca YX, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008278:66702366702369009923077Frankia alni ACN14a, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014815:841484*84148489809956616Micromonospora sp. L5 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_009142:267550*26755029023122682Saccharopolyspora erythraea NRRL 2338, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_000962:31168183116818313633319516Mycobacterium tuberculosis H37Rv, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_000962:37815013781501380757326073Mycobacterium tuberculosis H37Rv, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_002755:31109293110929312975718829Mycobacterium tuberculosis CDC1551, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_002755:47287247287249645723586Mycobacterium tuberculosis CDC1551, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_002945:30733703073370309459921230Mycobacterium bovis AF2122/97, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008769:30702663070266308959919334Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009525:2635792*2635792265864122850Mycobacterium tuberculosis H37Ra, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009525:31287863128786314904720262Mycobacterium tuberculosis H37Ra, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009525:37940003794000381625122252Mycobacterium tuberculosis H37Ra, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009565:31280943128094314823720144Mycobacterium tuberculosis F11, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009565:34857723485772350477419003Mycobacterium tuberculosis F11, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012207:30630393063039308477921741Mycobacterium bovis BCG str. Tokyo 172, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015953:3860467*3860467388114620680Streptomyces sp. SirexAA-E chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014168:86974686974691121841473Segniliparus rotundus DSM 44985 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_003155:45920004592000463614444145Streptomyces avermitilis MA-4680, complete genome9e-0660BLASTN svgBLASTP svg