Pre_GI Gene

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Host: NC_013714 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013714:2350749 Bifidobacterium dentium Bd1, complete genome

Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
235074923519691221Ribose transport system permease protein RbsCQuickGO ontologyBLASTP
235196623533571392Ribose transport ATP-binding protein RbsAQuickGO ontologyBLASTP
235360323547601158Hypothetical secreted proteinQuickGO ontologyBLASTP
235501723561891173N-acetylglucosamine repressorQuickGO ontologyBLASTP
23562132357058846Ribose transport ATP-binding protein RbsAQuickGO ontologyBLASTP
235715923582801122NagA1 N-acetylglucosamine-6-phosphate deacetylaseQuickGO ontologyBLASTP
236062423624141791RNA polymerase sigma factorQuickGO ontologyBLASTP
236265523647302076HelicaseQuickGO ontologyBLASTP
2364822236492099hypothetical protein