Pre_GI: BLASTN Hits

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Query: NC_013929:4136742 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 4136742, End: 4166086, Length: 29345

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003155:5987000*5987000601614029141Streptomyces avermitilis MA-4680, complete genome08050BLASTN svgBLASTP svg
NC_003888:5114147*5114147515215738011Streptomyces coelicolor A3(2), complete genome07799BLASTN svgBLASTP svg
NC_010572:3314500*3314500334441929920Streptomyces griseus subsp. griseus NBRC 13350, complete genome05975BLASTN svgBLASTP svg
NC_018750:4728870*4728870475950630637Streptomyces venezuelae ATCC 10712, complete genome05418BLASTN svgBLASTP svg
NC_015953:4385419*4385419443376948351Streptomyces sp. SirexAA-E chromosome, complete genome03509BLASTN svgBLASTP svg
NC_021177:4945878*4945878496359917722Streptomyces fulvissimus DSM 40593, complete genome03287BLASTN svgBLASTP svg
NC_015957:690817*69081771136520549Streptomyces violaceusniger Tu 4113 chromosome, complete genome02752BLASTN svgBLASTP svg
NC_003155:590500*59050061070320204Streptomyces avermitilis MA-4680, complete genome01396BLASTN svgBLASTP svg
NC_014165:597000*59700065256355564Thermobispora bispora DSM 43833 chromosome, complete genome0791BLASTN svgBLASTP svg
NC_009664:1569335*1569335161469045356Kineococcus radiotolerans SRS30216, complete genome0726BLASTN svgBLASTP svg
NC_015514:1088767*1088767111461425848Cellulomonas fimi ATCC 484 chromosome, complete genome0722BLASTN svgBLASTP svg
NC_014151:2945037*2945037297209927063Cellulomonas flavigena DSM 20109 chromosome, complete genome0698BLASTN svgBLASTP svg
NC_019673:8734993*8734993875416019168Saccharothrix espanaensis DSM 44229 complete genome0668BLASTN svgBLASTP svg
NC_014666:7641060*7641060766551924460Frankia sp. EuI1c chromosome, complete genome0654BLASTN svgBLASTP svg
NC_015588:701606*70160672031718712Isoptericola variabilis 225 chromosome, complete genome0650BLASTN svgBLASTP svg
NC_013093:7722436*7722436776426141826Actinosynnema mirum DSM 43827, complete genome3e-179636BLASTN svgBLASTP svg
NC_013757:4707960*4707960474173433775Geodermatophilus obscurus DSM 43160, complete genome3e-176626BLASTN svgBLASTP svg
NC_014211:258659*25865928488226224Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 plasmid2e-174620BLASTN svgBLASTP svg
NC_013521:3285423*3285423331709931677Sanguibacter keddieii DSM 10542, complete genome2e-152547BLASTN svgBLASTP svg
NC_012803:1839809*1839809185813118323Micrococcus luteus NCTC 2665, complete genome8e-149535BLASTN svgBLASTP svg
NC_013172:2647716*2647716267284725132Brachybacterium faecium DSM 4810, complete genome1e-147531BLASTN svgBLASTP svg
NC_013595:1100230*1100230112822127992Streptosporangium roseum DSM 43021, complete genome5e-141509BLASTN svgBLASTP svg
NC_013169:2147111*2147111217279325683Kytococcus sedentarius DSM 20547, complete genome3e-139504BLASTN svgBLASTP svg
NC_015312:5783366*5783366580217318808Pseudonocardia dioxanivorans CB1190 chromosome, complete genome5e-138500BLASTN svgBLASTP svg
NC_010617:665830*66583069497729148Kocuria rhizophila DC2201, complete genome2e-137498BLASTN svgBLASTP svg
NC_006361:792904*79290481281219909Nocardia farcinica IFM 10152, complete genome1e-135492BLASTN svgBLASTP svg
NC_014815:622048*62204864270320656Micromonospora sp. L5 chromosome, complete genome3e-133484BLASTN svgBLASTP svg
NC_014391:6175531*6175531619392618396Micromonospora aurantiaca ATCC 27029 chromosome, complete genome3e-133484BLASTN svgBLASTP svg
NC_011886:2950411*2950411298659936189Arthrobacter chlorophenolicus A6, complete genome4e-132480BLASTN svgBLASTP svg
NC_009480:2932108*2932108295389521788Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete7e-131476BLASTN svgBLASTP svg
NC_010407:316320*31632033498318664Clavibacter michiganensis subsp. sepedonicus chromosome, complete2e-128468BLASTN svgBLASTP svg
NC_015145:2994418*2994418301475220335Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome1e-113418BLASTN svgBLASTP svg
NC_013159:380014*38001440384023827Saccharomonospora viridis DSM 43017, complete genome5e-113416BLASTN svgBLASTP svg
NC_018681:1021063*1021063104680525743Nocardia brasiliensis ATCC 700358 chromosome, complete genome6e-88333BLASTN svgBLASTP svg
NC_013159:403918*40391842932125404Saccharomonospora viridis DSM 43017, complete genome3e-80307BLASTN svgBLASTP svg
NC_015145:2942500*2942500296157319074Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome3e-62248BLASTN svgBLASTP svg
NC_010545:404111*40411143329329183Corynebacterium urealyticum DSM 7109, complete genome6e-45190BLASTN svgBLASTP svg
NC_007164:2068678*2068678209743828761Corynebacterium jeikeium K411, complete genome1e-42182BLASTN svgBLASTP svg
NC_008541:3282415*3282415330766425250Arthrobacter sp. FB24 chromosome 1, complete sequence5e-39170BLASTN svgBLASTP svg
NC_002677:2241065*2241065227975638692Mycobacterium leprae TN, complete genome2e-38168BLASTN svgBLASTP svg
NC_011896:2240990*2240990227968138692Mycobacterium leprae Br4923, complete genome2e-38168BLASTN svgBLASTP svg
NC_014246:373247*37324739851625270Mobiluncus curtisii ATCC 43063 chromosome, complete genome3e-37165BLASTN svgBLASTP svg
NC_007760:2175992*2175992219609920108Anaeromyxobacter dehalogenans 2CP-C, complete genome1e-36163BLASTN svgBLASTP svg
NC_011891:2264853*2264853228864223790Anaeromyxobacter dehalogenans 2CP-1, complete genome8e-35157BLASTN svgBLASTP svg
NC_011145:2190531*2190531221308322553Anaeromyxobacter sp. K, complete genome8e-35157BLASTN svgBLASTP svg
NC_015711:5761030*5761030577913818109Myxococcus fulvus HW-1 chromosome, complete genome1e-30143BLASTN svgBLASTP svg
NC_015673:2206881*2206881223129524415Corynebacterium resistens DSM 45100 chromosome, complete genome5e-30141BLASTN svgBLASTP svg
NC_007164:2046937*2046937207953432598Corynebacterium jeikeium K411, complete genome5e-30141BLASTN svgBLASTP svg
NC_013174:650986*65098667158320598Jonesia denitrificans DSM 20603, complete genome6e-20107BLASTN svgBLASTP svg
NC_008148:2156873*2156873217729320421Rubrobacter xylanophilus DSM 9941, complete genome3e-19105BLASTN svgBLASTP svg
NC_008687:133728*13372816046226735Paracoccus denitrificans PD1222 chromosome 2, complete sequence2e-1799.6BLASTN svgBLASTP svg
NC_013721:276717*27671730391327197Gardnerella vaginalis 409-05, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_009454:316000*31600033359917600Pelotomaculum thermopropionicum SI, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_008751:2060391*2060391207813917749Desulfovibrio vulgaris subsp. vulgaris DP4, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_002937:1374532*1374532139596721436Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete2e-1695.6BLASTN svgBLASTP svg
NC_014218:1485568*1485568150987224305Arcanobacterium haemolyticum DSM 20595 chromosome, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_003911:480202*48020249877918578Silicibacter pomeroyi DSS-3, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_012560:603447*60344762358120135Azotobacter vinelandii DJ, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_021150:603447*60344762358120135Azotobacter vinelandii CA6, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_003155:62299362299365432631334Streptomyces avermitilis MA-4680, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_011206:469901*46990148812718227Acidithiobacillus ferrooxidans ATCC 53993, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_015556:717993*71799374011322121Pseudomonas fulva 12-X chromosome, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_009439:4267356*4267356429048723132Pseudomonas mendocina ymp, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_002937:1395977*1395977141908123105Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete6e-1177.8BLASTN svgBLASTP svg
NC_002516:4747154*4747154479172444571Pseudomonas aeruginosa PAO1, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_010645:31500*315005259921100Bordetella avium 197N, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008782:401667*40166742183920173Acidovorax sp. JS42, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_011992:392534*39253441503522502Acidovorax ebreus TPSY, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_014958:3094500*3094500311934324844Deinococcus maricopensis DSM 21211 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_013385:1504650*1504650152847923830Ammonifex degensii KC4, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_008609:708886*70888674019331308Pelobacter propionicus DSM 2379, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_003888:23059012305901232945223552Streptomyces coelicolor A3(2), complete genome6e-0867.9BLASTN svgBLASTP svg
NC_013216:293571*29357131635022780Desulfotomaculum acetoxidans DSM 771, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_014355:1257105*1257105128058723483Candidatus Nitrospira defluvii, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_010162:19353619353621732523790Sorangium cellulosum 'So ce 56', complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007912:1231436*1231436125527523840Saccharophagus degradans 2-40, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013508:3387272*3387272341154824277Edwardsiella tarda EIB202, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_010125:3467379*3467379349031122933Gluconacetobacter diazotrophicus PAl 5, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_003911:1791878*1791878185265460777Silicibacter pomeroyi DSS-3, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015380:1066911*1066911109186024950Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012490:2067246*2067246208809920854Rhodococcus erythropolis PR4, complete genome3e-0661.9BLASTN svgBLASTP svg