Pre_GI Gene

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Host: NC_015312 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015312:5783366 Pseudonocardia dioxanivorans CB1190 chromosome, complete genome

Host Lineage: Pseudonocardia dioxanivorans; Pseudonocardia; Pseudonocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Country: USA; Environment: Sludge, Fresh water; Isolation: Industrial sludge contaminated; Temp: Mesophile; Temp: 30C. Pseudonocardia members are abundant in diverse environments, and are known to degrade a variety of pollutants. These bacteria are also important in biocatalysis applications and in the production of antibiotics. Pseudonocardia dioxanivorans was first isolated from 1,4-dioxane containing sludge. This organism is able to grow using 1,4-dioxane, a toxic compound used as an industrial solvent, as the sole carbon source.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5783366578364728230S ribosomal protein S19QuickGO ontologyBLASTP
5783664578449783450S ribosomal protein L2QuickGO ontologyBLASTP
5784514578481330050S ribosomal protein L25L23QuickGO ontologyBLASTP
5784810578573692750S ribosomal protein L4L1eQuickGO ontologyBLASTP
5785736578638965450S ribosomal protein L3QuickGO ontologyBLASTP
5786403578670830630S ribosomal protein S10QuickGO ontologyBLASTP
578706157882541194translation elongation factor TuQuickGO ontologyBLASTP
578839757904962100translation elongation factor GQuickGO ontologyBLASTP
5790541579101147130S ribosomal protein S7QuickGO ontologyBLASTP
5791011579138537530S ribosomal protein S12QuickGO ontologyBLASTP
579207257959743903DNA-directed RNA polymerase subunit betaQuickGO ontologyBLASTP
579601757995443528DNA-directed RNA polymerase subunit betaQuickGO ontologyBLASTP
580048558021731689Long-chain-fatty-acid--CoA ligaseQuickGO ontologyBLASTP