Pre_GI Gene

Some Help

Host: NC_008148 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008148:2156873 Rubrobacter xylanophilus DSM 9941, complete genome

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
21568732157094222translation initiation factor IF-1QuickGO ontologyBLASTP
21571592157938780methionine aminopeptidase type IQuickGO ontologyBLASTP
21579352158561627adenylate kinasesQuickGO ontologyBLASTP
215855821598441287SecY proteinQuickGO ontologyBLASTP
21598632160321459ribosomal protein L15QuickGO ontologyBLASTP
21603212160506186ribosomal protein L30QuickGO ontologyBLASTP
21605032161105603ribosomal protein S5-like proteinQuickGO ontologyBLASTP
21611282161478351ribosomal protein L18QuickGO ontologyBLASTP
21615002162033534ribosomal protein L6QuickGO ontologyBLASTP
21620452162443399ribosomal protein S8QuickGO ontologyBLASTP
21624512162636186ribosomal protein S14QuickGO ontologyBLASTP
21626512163193543ribosomal protein L5QuickGO ontologyBLASTP
21631862163524339ribosomal protein L24QuickGO ontologyBLASTP
21635052163873369ribosomal protein L14QuickGO ontologyBLASTP
21638732164289417ribosomal protein S17QuickGO ontologyBLASTP
21642932164496204ribosomal protein L29QuickGO ontologyBLASTP
21644962164912417ribosomal protein L16QuickGO ontologyBLASTP
21649162165572657ribosomal protein S3QuickGO ontologyBLASTP
21655752165958384ribosomal protein L22QuickGO ontologyBLASTP
21659622166243282ribosomal protein S19QuickGO ontologyBLASTP
21662442167083840ribosomal protein L2QuickGO ontologyBLASTP
21670852167372288Ribosomal protein L25L23QuickGO ontologyBLASTP
21673742168009636ribosomal protein L4L1eQuickGO ontologyBLASTP
21680112168628618ribosomal protein L3QuickGO ontologyBLASTP
21686332168944312ribosomal protein S10QuickGO ontologyBLASTP
216895321701551203translation elongation factor TuQuickGO ontologyBLASTP
217016921723162148translation elongation factor GQuickGO ontologyBLASTP
21723272172797471ribosomal protein S7QuickGO ontologyBLASTP
21728112173179369ribosomal protein S12QuickGO ontologyBLASTP
217340621772933888DNA-directed RNA polymerase subunit beta-primeQuickGO ontologyBLASTP