Pre_GI Gene

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Host: NC_015957 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015957:690817 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
69081769165383750S ribosomal protein L2QuickGO ontologyBLASTP
69166669194728230S ribosomal protein S19QuickGO ontologyBLASTP
69198869233534850S ribosomal protein L22QuickGO ontologyBLASTP
69233569316282830S ribosomal protein S3QuickGO ontologyBLASTP
69316869358742050S ribosomal protein L16QuickGO ontologyBLASTP
69358769381122550S ribosomal protein L29QuickGO ontologyBLASTP
69381169409828830S ribosomal protein S17QuickGO ontologyBLASTP
69422969459736950S ribosomal protein L14QuickGO ontologyBLASTP
69460169492432450S ribosomal protein L24QuickGO ontologyBLASTP
69492469548456150S ribosomal protein L5QuickGO ontologyBLASTP
69548869567318630S ribosomal protein S14QuickGO ontologyBLASTP
69593469633239930S ribosomal protein S8QuickGO ontologyBLASTP
69635369689254050S ribosomal protein L6QuickGO ontologyBLASTP
69689669727938450S ribosomal protein L18QuickGO ontologyBLASTP
69732369792860630S ribosomal protein S5QuickGO ontologyBLASTP
69793169811318350S ribosomal protein L30QuickGO ontologyBLASTP
69811569857045650S ribosomal protein L15QuickGO ontologyBLASTP
6987757000881314preprotein translocase subunit SecYQuickGO ontologyBLASTP
700088700744657adenylate kinaseQuickGO ontologyBLASTP
700834701670837methionine aminopeptidase type IQuickGO ontologyBLASTP
701821702042222translation initiation factor IF-1QuickGO ontologyBLASTP
70207070218311450S ribosomal protein L36QuickGO ontologyBLASTP
70237970275938130S ribosomal protein S13QuickGO ontologyBLASTP
70282670323040530S ribosomal protein S11QuickGO ontologyBLASTP
70325870388462730S ribosomal protein S4QuickGO ontologyBLASTP
7039927050141023DNA-directed RNA polymerase subunit alphaQuickGO ontologyBLASTP
70519070574155250S ribosomal protein L17QuickGO ontologyBLASTP
705828706694867tRNA pseudouridine synthase AQuickGO ontologyBLASTP
706890707747858anti-sigma-factor antagonistQuickGO ontologyBLASTP
707744708154411anti-sigma-factor antagonistQuickGO ontologyBLASTP
708138708617480putative anti-sigma regulatory factor serinethreonine protein kinaseQuickGO ontologyBLASTP
7086147096331020Stage II sporulation protein EQuickGO ontologyBLASTP
7096307108351206protein serinethreonine phosphataseQuickGO ontologyBLASTP
710829711365537hypothetical proteinBLASTP