Pre_GI Gene

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Host: NC_006361 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006361:792904 Nocardia farcinica IFM 10152, complete genome

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
7929047939261023hypothetical proteinBLASTP
79442579473030630S ribosomal protein S10QuickGO ontologyBLASTP
79474579541066650S ribosomal protein L3QuickGO ontologyBLASTP
79540779609969350S ribosomal protein L4QuickGO ontologyBLASTP
79609679640130650S ribosomal protein L23QuickGO ontologyBLASTP
79643579727183750S ribosomal protein L2QuickGO ontologyBLASTP
797287797568282putative ribosomal protein S19QuickGO ontologyBLASTP
79756579796640250S ribosomal protein L22QuickGO ontologyBLASTP
79796779877080430S ribosomal protein S3QuickGO ontologyBLASTP
79877479919041750S ribosomal protein L16QuickGO ontologyBLASTP
79919079942924050S ribosomal protein L29QuickGO ontologyBLASTP
79942679969527030S ribosomal protein S17QuickGO ontologyBLASTP
799799800362564hypothetical proteinBLASTP
800338800820483putative MutT family proteinQuickGO ontologyBLASTP
800825801481657hypothetical proteinBLASTP
8044228061521731hypothetical protein
806278807003726putative proteaseQuickGO ontologyBLASTP
807252807656405hypothetical protein
807653808582930putative RNA pseudouridylate synthaseQuickGO ontologyBLASTP
808616809059444hypothetical proteinBLASTP
8092298110791851putative ABC transporterQuickGO ontologyBLASTP
8110768128121737putative ABC transporterQuickGO ontologyBLASTP