Pre_GI: BLASTN Hits

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Query: NC_013198:511795 Lactobacillus rhamnosus GG, complete genome

Start: 511795, End: 535270, Length: 23476

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013198:394000*39400046795873959Lactobacillus rhamnosus GG, complete genome03136BLASTN svgBLASTP svg
NC_013198:1538792*1538792157448935698Lactobacillus rhamnosus GG, complete genome03130BLASTN svgBLASTP svg
NC_013198:1030970*1030970105037019401Lactobacillus rhamnosus GG, complete genome03126BLASTN svgBLASTP svg
NC_013198:2088780*2088780211935230573Lactobacillus rhamnosus GG, complete genome03124BLASTN svgBLASTP svg
NC_010999:25160002516000253888722888Lactobacillus casei, complete genome1e-26129BLASTN svgBLASTP svg
NC_008526:1822000*1822000184089018891Lactobacillus casei ATCC 334, complete genome1e-20109BLASTN svgBLASTP svg
NC_014334:1775781*1775781179812122341Lactobacillus casei str. Zhang chromosome, complete genome1e-20109BLASTN svgBLASTP svg
NC_013199:1966334*1966334198922322890Lactobacillus rhamnosus Lc 705, complete genome2e-19105BLASTN svgBLASTP svg
NC_007929:428743*42874345327324531Lactobacillus salivarius subsp. salivarius UCC118, complete genome2e-19105BLASTN svgBLASTP svg
NC_013199:24266862426686244660019915Lactobacillus rhamnosus Lc 705, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013198:24580802458080247900920930Lactobacillus rhamnosus GG, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013199:1407742*1407742143009922358Lactobacillus rhamnosus Lc 705, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013199:2536705*2536705255640419700Lactobacillus rhamnosus Lc 705, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_008526:817628*81762883659918972Lactobacillus casei ATCC 334, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_008526:2489196*2489196251110721912Lactobacillus casei ATCC 334, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_013199:11500001150000117399223993Lactobacillus rhamnosus Lc 705, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013199:1886271*1886271190783621566Lactobacillus rhamnosus Lc 705, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_013199:23869242386924241111624193Lactobacillus rhamnosus Lc 705, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014315:27870892787089281864431556Nitrosococcus watsoni C-113 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008526:74500*7450011650442005Lactobacillus casei ATCC 334, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010999:1979989*1979989200135021362Lactobacillus casei, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013199:2058857*2058857209031631460Lactobacillus rhamnosus Lc 705, complete genome3e-0661.9BLASTN svgBLASTP svg