Pre_GI: BLASTN Hits

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Query: NC_012808:3972983 Methylobacterium extorquens AM1, complete genome

Start: 3972983, End: 3995422, Length: 22440

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012811:41077641077643723726462Methylobacterium extorquens AM1 megaplasmid, complete sequence02385BLASTN svgBLASTP svg
NC_012808:48777034877703489559917897Methylobacterium extorquens AM1, complete genome02385BLASTN svgBLASTP svg
NC_012808:4235567*4235567425812622560Methylobacterium extorquens AM1, complete genome02385BLASTN svgBLASTP svg
NC_012808:420334*42033444610925776Methylobacterium extorquens AM1, complete genome02385BLASTN svgBLASTP svg
NC_012808:1220378*1220378126948449107Methylobacterium extorquens AM1, complete genome02385BLASTN svgBLASTP svg
NC_012811:11053951105395112959924205Methylobacterium extorquens AM1 megaplasmid, complete sequence02383BLASTN svgBLASTP svg
NC_012808:4137000*4137000416801731018Methylobacterium extorquens AM1, complete genome02383BLASTN svgBLASTP svg
NC_012808:1122341*1122341115920936869Methylobacterium extorquens AM1, complete genome02381BLASTN svgBLASTP svg
NC_012808:38977513897751392263924889Methylobacterium extorquens AM1, complete genome02381BLASTN svgBLASTP svg
NC_012808:92198592198594462922645Methylobacterium extorquens AM1, complete genome02381BLASTN svgBLASTP svg
NC_012808:37118063711806373409922294Methylobacterium extorquens AM1, complete genome02379BLASTN svgBLASTP svg
NC_012808:806432*80643283135724926Methylobacterium extorquens AM1, complete genome02371BLASTN svgBLASTP svg
NC_010505:1205747*1205747122904923303Methylobacterium radiotolerans JCM 2831, complete genome0809BLASTN svgBLASTP svg
NC_011758:24766624766626663818973Methylobacterium chloromethanicum CM4 plasmid pMCHL01, complete2e-127464BLASTN svgBLASTP svg
NC_011757:44453434445343447709931757Methylobacterium chloromethanicum CM4, complete genome9e-102379BLASTN svgBLASTP svg
NC_011757:5742290*5742290578349941210Methylobacterium chloromethanicum CM4, complete genome2e-84321BLASTN svgBLASTP svg
NC_014100:172452*17245219647824027Caulobacter segnis ATCC 21756 chromosome, complete genome8e-59236BLASTN svgBLASTP svg
NC_002696:3759551*3759551378932829778Caulobacter crescentus CB15, complete genome8e-59236BLASTN svgBLASTP svg
NC_010172:4064087*4064087410309939013Methylobacterium extorquens PA1, complete genome2e-47198BLASTN svgBLASTP svg
NC_011757:21773921773923612518387Methylobacterium chloromethanicum CM4, complete genome5e-26127BLASTN svgBLASTP svg
NC_010505:21038872103887213081426928Methylobacterium radiotolerans JCM 2831, complete genome8e-25123BLASTN svgBLASTP svg
NC_010172:4185904*4185904422075034847Methylobacterium extorquens PA1, complete genome1e-23119BLASTN svgBLASTP svg
NC_013851:31669693166969319361626648Allochromatium vinosum DSM 180 chromosome, complete genome5e-23117BLASTN svgBLASTP svg
NC_011757:12886371288637131159922963Methylobacterium chloromethanicum CM4, complete genome2e-22115BLASTN svgBLASTP svg
NC_011144:2710876*2710876272938418509Phenylobacterium zucineum HLK1, complete genome8e-22113BLASTN svgBLASTP svg
NC_011144:26742422674242270317628935Phenylobacterium zucineum HLK1, complete genome8e-22113BLASTN svgBLASTP svg
NC_011144:10739441073944109429420351Phenylobacterium zucineum HLK1, complete genome8e-22113BLASTN svgBLASTP svg
NC_010125:10517351051735108259930865Gluconacetobacter diazotrophicus PAl 5, complete genome3e-21111BLASTN svgBLASTP svg
NC_010125:14850014850017622727728Gluconacetobacter diazotrophicus PAl 5, complete genome3e-21111BLASTN svgBLASTP svg
NC_010125:15383351538335158603047696Gluconacetobacter diazotrophicus PAl 5, complete genome3e-21111BLASTN svgBLASTP svg
NC_010125:28136532813653283723423582Gluconacetobacter diazotrophicus PAl 5, complete genome3e-21111BLASTN svgBLASTP svg
NC_010125:38171138171140405422344Gluconacetobacter diazotrophicus PAl 5, complete genome3e-21111BLASTN svgBLASTP svg
NC_010125:955863*955863100278546923Gluconacetobacter diazotrophicus PAl 5, complete genome3e-21111BLASTN svgBLASTP svg
NC_015563:47734154773415479788824474Delftia sp. Cs1-4 chromosome, complete genome3e-21111BLASTN svgBLASTP svg
NC_009439:79449879449881473720240Pseudomonas mendocina ymp, complete genome5e-20107BLASTN svgBLASTP svg
NC_011757:51027325102732513806935338Methylobacterium chloromethanicum CM4, complete genome2e-19105BLASTN svgBLASTP svg
NC_008435:2658986*2658986275828699301Rhodopseudomonas palustris BisA53, complete genome8e-19103BLASTN svgBLASTP svg
NC_011757:51700051700055359936600Methylobacterium chloromethanicum CM4, complete genome8e-19103BLASTN svgBLASTP svg
NC_011757:748223*74822379542247200Methylobacterium chloromethanicum CM4, complete genome8e-19103BLASTN svgBLASTP svg
NC_012559:18880001888000191471626717Laribacter hongkongensis HLHK9, complete genome3e-18101BLASTN svgBLASTP svg
NC_015186:1504275*1504275153079626522Acidiphilium multivorum AIU301, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_011757:42057944205794422846522672Methylobacterium chloromethanicum CM4, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_012808:594000*59400061960225603Methylobacterium extorquens AM1, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_009720:12488661248866127253723672Xanthobacter autotrophicus Py2, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_007778:1053462*1053462107959926138Rhodopseudomonas palustris HaA2, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_005296:5238882*5238882526489126010Rhodopseudomonas palustris CGA009, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_011004:5520771*5520771554678126011Rhodopseudomonas palustris TIE-1, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_012850:45931545931548320123887Rhizobium leguminosarum bv. trifolii WSM1325, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_008825:4025705*4025705405199926295Methylibium petroleiphilum PM1, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_010514:600060002855022551Methylobacterium radiotolerans JCM 2831 plasmid pMRAD03, complete1e-1489.7BLASTN svgBLASTP svg
NC_009952:366959*36695940184134883Dinoroseobacter shibae DFL 12, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009952:3522370*3522370356180439435Dinoroseobacter shibae DFL 12, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009952:2661268*2661268268533524068Dinoroseobacter shibae DFL 12, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_007626:46887774688777471078422008Magnetospirillum magneticum AMB-1, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013093:1909305*1909305193716827864Actinosynnema mirum DSM 43827, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_009092:15043631504363158010375741Shewanella loihica PV-4, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010172:798923*79892388030381381Methylobacterium extorquens PA1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015186:2197236*2197236229649299257Acidiphilium multivorum AIU301, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_020209:2119845*2119845214457424730Pseudomonas poae RE*1-1-14, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_009937:5033152*5033152505948226331Azorhizobium caulinodans ORS 571, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_009092:43376174337617437380536189Shewanella loihica PV-4, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_008435:39151103915110393809922990Rhodopseudomonas palustris BisA53, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_009720:44069914406991444791640926Xanthobacter autotrophicus Py2, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_009937:43921084392108441736925262Azorhizobium caulinodans ORS 571, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010505:26909392690939272152230584Methylobacterium radiotolerans JCM 2831, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010510:339879*33987937475134873Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete3e-1281.8BLASTN svgBLASTP svg
NC_009664:570768*57076859843127664Kineococcus radiotolerans SRS30216, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_002696:2941644*2941644296461322970Caulobacter crescentus CB15, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004578:11537381153738117268818951Pseudomonas syringae pv. tomato str. DC3000, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_002939:1480474*1480474150560725134Geobacter sulfurreducens PCA, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007626:3393940*3393940344229748358Magnetospirillum magneticum AMB-1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007626:35222653522265361842896164Magnetospirillum magneticum AMB-1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008463:2654014*2654014267605522042Pseudomonas aeruginosa UCBPP-PA14, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009937:412302*41230243181319512Azorhizobium caulinodans ORS 571, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011770:3735162*3735162376383628675Pseudomonas aeruginosa LESB58, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011832:2760000*2760000278338023381Candidatus Methanosphaerula palustris E1-9c, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013858:47729847729850922131924Azospirillum sp. B510 plasmid pAB510d, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_014006:12045001204500122366719168Sphingobium japonicum UT26S chromosome 1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007626:10910001091000111043819439Magnetospirillum magneticum AMB-1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_008209:25366325366327713323471Roseobacter denitrificans OCh 114, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_008702:2378890*2378890240382824939Azoarcus sp. BH72, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_011004:4947980*4947980497058322604Rhodopseudomonas palustris TIE-1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_013855:558831*55883158109922269Azospirillum sp. B510 plasmid pAB510a, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_014910:2015627*2015627203840722781Alicycliphilus denitrificans BC chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_013851:3142182*3142182316259920418Allochromatium vinosum DSM 180 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_011662:13195613195615548623531Thauera sp. MZ1T, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007626:40380544038054406859930546Magnetospirillum magneticum AMB-1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007519:3240864*3240864326641325550Desulfovibrio alaskensis G20 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009664:4423829*44238294686013262185Kineococcus radiotolerans SRS30216, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009943:748788*74878877355124764Candidatus Desulfococcus oleovorans Hxd3, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014844:51155251155253463823087Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_004463:21581162158116223609977984Bradyrhizobium japonicum USDA 110, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_004578:21859072185907220851022604Pseudomonas syringae pv. tomato str. DC3000, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006350:1084930*1084930112191036981Burkholderia pseudomallei K96243 chromosome 1, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_007643:15047581504758152909924342Rhodospirillum rubrum ATCC 11170, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008027:29090002909000292988020881Pseudomonas entomophila L48, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008463:3503576*3503576352773524160Pseudomonas aeruginosa UCBPP-PA14, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008570:23650023650025959923100Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009937:53082530827690623825Azorhizobium caulinodans ORS 571, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_011757:4030346*4030346406130430959Methylobacterium chloromethanicum CM4, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_011887:11061811061813688826271Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete4e-0867.9BLASTN svgBLASTP svg
NC_012660:3689223*3689223371658727365Pseudomonas fluorescens SBW25 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012660:5571500*5571500559959928100Pseudomonas fluorescens SBW25 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015514:33071993307199334464737449Cellulomonas fimi ATCC 484 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008209:33130873313087333311220026Roseobacter denitrificans OCh 114, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008209:1097607*1097607111626218656Roseobacter denitrificans OCh 114, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007005:10362431036243106363927397Pseudomonas syringae pv. syringae B728a, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005085:1096000*1096000111962323624Chromobacterium violaceum ATCC 12472, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004578:38173303817330384200124672Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009720:41242554124255415127427020Xanthobacter autotrophicus Py2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010172:632180*63218065846326284Methylobacterium extorquens PA1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011757:577611*57761160454026930Methylobacterium chloromethanicum CM4, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011901:13983761398376142787629501Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_013174:373726*37372639441720692Jonesia denitrificans DSM 20603, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014623:87635518763551878689723347Stigmatella aurantiaca DW4/3-1 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015976:10648881064888109285227965Sphingobium sp. SYK-6, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007722:16893716893719928730351Erythrobacter litoralis HTCC2594, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007722:21720002172000219518323184Erythrobacter litoralis HTCC2594, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010501:25118872511887254627834392Pseudomonas putida W619, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012559:23095662309566233407924514Laribacter hongkongensis HLHK9, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014817:1063173*1063173108629123119Asticcacaulis excentricus CB 48 chromosome 2, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_015593:2553500*2553500259301139512Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete7e-0763.9BLASTN svgBLASTP svg
NC_009434:20065002006500203099424495Pseudomonas stutzeri A1501, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009720:216589*21658924097524387Xanthobacter autotrophicus Py2, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009952:1984955*1984955201717932225Dinoroseobacter shibae DFL 12, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009952:2217877*2217877224661928743Dinoroseobacter shibae DFL 12, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009952:44202944202947428932261Dinoroseobacter shibae DFL 12, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011420:36550536550538963524131Rhodospirillum centenum SW, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011883:2680380*2680380271559935220Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,3e-0661.9BLASTN svgBLASTP svg
NC_008048:38964538964542759937955Sphingopyxis alaskensis RB2256, complete genome3e-0661.9BLASTN svgBLASTP svg