Pre_GI: BLASTN Hits

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Query: NC_012660:3320330 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 3320330, End: 3350447, Length: 30118

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020209:19495001949500197652927030Pseudomonas poae RE*1-1-14, complete genome2e-137498BLASTN svgBLASTP svg
NC_012660:26849812684981271787932899Pseudomonas fluorescens SBW25 chromosome, complete genome2e-118434BLASTN svgBLASTP svg
NC_005773:1333863*1333863135559921737Pseudomonas syringae pv. phaseolicola 1448A, complete genome7e-94353BLASTN svgBLASTP svg
NC_015733:1555476*1555476160259947124Pseudomonas putida S16 chromosome, complete genome2e-48202BLASTN svgBLASTP svg
NC_015733:25813242581324263433453011Pseudomonas putida S16 chromosome, complete genome2e-48202BLASTN svgBLASTP svg
NC_015733:29635482963548298726023713Pseudomonas putida S16 chromosome, complete genome2e-48202BLASTN svgBLASTP svg
NC_015733:41300004130000414900419005Pseudomonas putida S16 chromosome, complete genome2e-48202BLASTN svgBLASTP svg
NC_015733:715947*71594774917233226Pseudomonas putida S16 chromosome, complete genome2e-48202BLASTN svgBLASTP svg
NC_015740:34862263486226350909922874Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete6e-48200BLASTN svgBLASTP svg
NC_009434:60876560876568209973335Pseudomonas stutzeri A1501, complete genome1e-45192BLASTN svgBLASTP svg
NC_009434:69558269558276739471813Pseudomonas stutzeri A1501, complete genome1e-45192BLASTN svgBLASTP svg
NC_015740:14191014191016419522286Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-45192BLASTN svgBLASTP svg
NC_015740:36783423678342371659938258Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-45192BLASTN svgBLASTP svg
NC_015733:3736104*37361043837697101594Pseudomonas putida S16 chromosome, complete genome6e-45190BLASTN svgBLASTP svg
NC_015379:60239266023926604728023355Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,3e-40174BLASTN svgBLASTP svg
NC_009512:51664595166459519343626978Pseudomonas putida F1, complete genome3e-37165BLASTN svgBLASTP svg
NC_002947:49943354994335504935655022Pseudomonas putida KT2440, complete genome1e-33153BLASTN svgBLASTP svg
NC_012560:2451500*2451500248009928600Azotobacter vinelandii DJ, complete genome5e-27131BLASTN svgBLASTP svg
NC_021150:2451500*2451500248001928520Azotobacter vinelandii CA6, complete genome5e-27131BLASTN svgBLASTP svg
NC_008782:2062962*2062962208700324042Acidovorax sp. JS42, complete genome3e-19105BLASTN svgBLASTP svg
NC_004578:38173303817330384200124672Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-19105BLASTN svgBLASTP svg
NC_004578:32416183241618326508823471Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_002947:34923793492379351709924721Pseudomonas putida KT2440, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_015573:64980064980067054820749Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_014375:1146328*1146328117709930772Brevundimonas subvibrioides ATCC 15264 chromosome, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_010831:40000400006310923110Chlorobium phaeobacteroides BS1, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_007005:40623114062311408347221162Pseudomonas syringae pv. syringae B728a, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_011206:26854992685499274159956101Acidithiobacillus ferrooxidans ATCC 53993, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_015410:96952696952699007820553Pseudomonas mendocina NK-01 chromosome, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_008322:72261272261274059917988Shewanella sp. MR-7, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_004578:11537381153738117268818951Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007005:10362431036243106363927397Pseudomonas syringae pv. syringae B728a, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008027:29090002909000292988020881Pseudomonas entomophila L48, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_009439:44289044289048900846119Pseudomonas mendocina ymp, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008321:39644143964414398859924186Shewanella sp. MR-4, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_005085:24623246234912724505Chromobacterium violaceum ATCC 12472, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_004578:21859072185907220851022604Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_007644:20998782099878212213022253Moorella thermoacetica ATCC 39073, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_009092:43376174337617437380536189Shewanella loihica PV-4, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_020209:45495634549563457659927037Pseudomonas poae RE*1-1-14, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_015942:23163542316354234809931746Acidithiobacillus ferrivorans SS3 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_008577:41833614183361420632622966Shewanella sp. ANA-3 chromosome 1, complete sequence2e-1179.8BLASTN svgBLASTP svg
NC_008463:2654014*2654014267605522042Pseudomonas aeruginosa UCBPP-PA14, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_010505:40095040095042537624427Methylobacterium radiotolerans JCM 2831, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_011146:896000*89600091840322404Geobacter bemidjiensis Bem, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_013850:4612812*4612812463649923688Klebsiella variicola At-22 chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_014541:29785002978500299617417675Ferrimonas balearica DSM 9799 chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_002939:1480474*1480474150560725134Geobacter sulfurreducens PCA, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004129:57814135781413580497523563Pseudomonas fluorescens Pf-5, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_005085:31165143116514313924422731Chromobacterium violaceum ATCC 12472, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_005773:38514333851433386927817846Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007492:20357612035761205955323793Pseudomonas fluorescens PfO-1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007963:15820891582089161676234674Chromohalobacter salexigens DSM 3043, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_020209:2119845*2119845214457424730Pseudomonas poae RE*1-1-14, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015740:3631326*3631326366173930414Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete9e-1073.8BLASTN svgBLASTP svg
NC_008700:27883632788363281549227130Shewanella amazonensis SB2B, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_013959:2449315*2449315247282523511Sideroxydans lithotrophicus ES-1 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_016002:1326500*1326500135490028401Pseudogulbenkiania sp. NH8B, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_015410:22588002258800228509926300Pseudomonas mendocina NK-01 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_003295:3688000*3688000372599938000Ralstonia solanacearum GMI1000, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009439:79449879449881473720240Pseudomonas mendocina ymp, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_008570:3777469*3777469380230024832Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_009092:15043631504363158010375741Shewanella loihica PV-4, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010424:69718769718777730380117Candidatus Desulforudis audaxviator MP104C, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011985:194973*19497321836723395Agrobacterium radiobacter K84 chromosome 1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014006:2932959*2932959295601723059Sphingobium japonicum UT26S chromosome 1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013169:513327*51332754059927273Kytococcus sedentarius DSM 20547, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_009921:43990004399000442459925600Frankia sp. EAN1pec, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_004459:20254362025436205524629811Vibrio vulnificus CMCP6 chromosome I, complete sequence9e-0763.9BLASTN svgBLASTP svg
NC_004129:24407442440744246509824355Pseudomonas fluorescens Pf-5, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_000913:15704311570431159611025680Escherichia coli K12, complete genome4e-0661.9BLASTN svgBLASTP svg
CU928160:15793751579375160831928945Escherichia coli IAI1 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
CP002516:23955782395578241927123694Escherichia coli KO11, complete genome4e-0661.9BLASTN svgBLASTP svg
CP002185:16813271681327171027728951Escherichia coli W, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_007384:16968311696831171856121731Shigella sonnei Ss046, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009439:860571*86057188549124921Pseudomonas mendocina ymp, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009800:15890001589000161490825909Escherichia coli HS, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009801:16787901678790170320124412Escherichia coli E24377A, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010468:23457812345781237145925679Escherichia coli ATCC 8739, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010473:16610001661000168573524736Escherichia coli str. K-12 substr. DH10B, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_014323:3292082*3292082331943527354Herbaspirillum seropedicae SmR1 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_015733:26583372658337270338145045Pseudomonas putida S16 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
AC_000091:15740001574000159980025801Escherichia coli W3110 DNA, complete genome4e-0661.9BLASTN svgBLASTP svg