Pre_GI: BLASTN Hits

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Query: NC_009092:2282437 Shewanella loihica PV-4, complete genome

Start: 2282437, End: 2327441, Length: 45005

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009052:25123732512373255632743955Shewanella baltica OS155, complete genome0995BLASTN svgBLASTP svg
NC_009997:26350252635025266689331869Shewanella baltica OS195, complete genome0817BLASTN svgBLASTP svg
NC_014541:21227882122788214364020853Ferrimonas balearica DSM 9799 chromosome, complete genome1e-120442BLASTN svgBLASTP svg
NC_007492:20357612035761205955323793Pseudomonas fluorescens PfO-1, complete genome2e-51212BLASTN svgBLASTP svg
NC_012560:19652511965251198886223612Azotobacter vinelandii DJ, complete genome2e-48202BLASTN svgBLASTP svg
NC_021150:19652641965264198887523612Azotobacter vinelandii CA6, complete genome2e-48202BLASTN svgBLASTP svg
NC_008322:1898000*1898000192173523736Shewanella sp. MR-7, complete genome3e-35159BLASTN svgBLASTP svg
NC_008577:1885809*1885809190718721379Shewanella sp. ANA-3 chromosome 1, complete sequence1e-34157BLASTN svgBLASTP svg
NC_007298:77872377872382009941377Dechloromonas aromatica RCB, complete genome5e-31145BLASTN svgBLASTP svg
NC_014910:34584753458475348275724283Alicycliphilus denitrificans BC chromosome, complete genome1e-25127BLASTN svgBLASTP svg
NC_015422:11637521163752119065526904Alicycliphilus denitrificans K601 chromosome, complete genome1e-25127BLASTN svgBLASTP svg
NC_011992:10389851038985105881219828Acidovorax ebreus TPSY, complete genome2e-24123BLASTN svgBLASTP svg
NC_008782:11367321136732115655319822Acidovorax sp. JS42, complete genome3e-23119BLASTN svgBLASTP svg
NC_007005:40623114062311408347221162Pseudomonas syringae pv. syringae B728a, complete genome1e-22117BLASTN svgBLASTP svg
NC_008702:1432952*1432952147997747026Azoarcus sp. BH72, complete genome2e-21113BLASTN svgBLASTP svg
NC_014837:1570500*1570500160135230853Pantoea sp. At-9b chromosome, complete genome4e-19105BLASTN svgBLASTP svg
NC_011186:515214*51521454656031347Vibrio fischeri MJ11 chromosome II, complete sequence2e-18103BLASTN svgBLASTP svg
NC_006512:696000*69600071719521196Idiomarina loihiensis L2TR, complete genome6e-18101BLASTN svgBLASTP svg
NC_008577:25113262511326253076419439Shewanella sp. ANA-3 chromosome 1, complete sequence6e-18101BLASTN svgBLASTP svg
NC_015224:2061951*2061951208443822488Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,6e-18101BLASTN svgBLASTP svg
NC_003143:2101902*2101902212009918198Yersinia pestis CO92, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_004088:2691565*2691565271495023386Yersinia pestis KIM, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_005810:1663672*1663672168742323752Yersinia pestis biovar Microtus str. 91001, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_006155:2084669*2084669210379619128Yersinia pseudotuberculosis IP 32953, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_008149:2517538*2517538254015722620Yersinia pestis Nepal516, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_008150:1384102*1384102140260518504Yersinia pestis Antiqua, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_008570:3777469*3777469380230024832Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_010159:2128157*2128157214655218396Yersinia pestis Angola, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_010465:2582080*2582080260359921520Yersinia pseudotuberculosis YPIII, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_007712:1954808*1954808197959924792Sodalis glossinidius str. 'morsitans', complete genome1e-1697.6BLASTN svgBLASTP svg
NC_014500:3097362*3097362318793090569Dickeya dadantii 3937 chromosome, complete genome4e-1695.6BLASTN svgBLASTP svg
NC_012912:1701231*1701231174963148401Dickeya zeae Ech1591, complete genome4e-1695.6BLASTN svgBLASTP svg
NC_012880:1765920*1765920184383077911Dickeya dadantii Ech703, complete genome4e-1695.6BLASTN svgBLASTP svg
NC_011770:45421834542183456916026978Pseudomonas aeruginosa LESB58, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_012848:32088332088334425923377Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501,1e-1593.7BLASTN svgBLASTP svg
NC_013416:820989*82098984592424936Aggregatibacter actinomycetemcomitans D11S-1, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_013592:1668092*1668092170683538744Dickeya dadantii Ech586, complete genome6e-1591.7BLASTN svgBLASTP svg
NC_005773:38514333851433386927817846Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_004578:21859072185907220851022604Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_008463:43421194342119436920327085Pseudomonas aeruginosa UCBPP-PA14, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_010524:2761394*2761394278436822975Leptothrix cholodnii SP-6, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_013508:2130681*2130681216209931419Edwardsiella tarda EIB202, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_013422:20044782004478202318018703Halothiobacillus neapolitanus c2, complete genome9e-1177.8BLASTN svgBLASTP svg
CP002797:1960000*1960000198508025081Escherichia coli NA114, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_004547:3207776*3207776324611038335Erwinia carotovora subsp. atroseptica SCRI1043, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_007519:3527207*3527207355046623260Desulfovibrio alaskensis G20 chromosome, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_015566:1941407*1941407196269221286Serratia sp. AS12 chromosome, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_020064:1854589*1854589187841223824Serratia marcescens FGI94, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_013446:29190052919005294440725403Comamonas testosteroni CNB-2, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_012913:77264177264179553422894Aggregatibacter aphrophilus NJ8700, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_002937:1548081*1548081157450726427Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete1e-0973.8BLASTN svgBLASTP svg
NC_008321:3815940*3815940385514239203Shewanella sp. MR-4, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_009792:13455001345500136809322594Citrobacter koseri ATCC BAA-895, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_003197:17536631753663177609922437Salmonella typhimurium LT2, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_003198:13368941336894136036523472Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-0765.9BLASTN svgBLASTP svg
NC_004631:16235111623511164614622636Salmonella enterica subsp. enterica serovar Typhi Ty2, complete3e-0765.9BLASTN svgBLASTP svg
NC_006511:12731621273162129663123470Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC3e-0765.9BLASTN svgBLASTP svg
NC_006905:17660001766000178860222603Salmonella enterica subsp. enterica serovar Choleraesuis str3e-0765.9BLASTN svgBLASTP svg
NC_011080:17500001750000177244622447Salmonella enterica subsp. enterica serovar Newport str. SL254,3e-0765.9BLASTN svgBLASTP svg
NC_011149:1429523*1429523149808768565Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-0765.9BLASTN svgBLASTP svg
NC_012214:19745001974500201677342274Erwinia pyrifoliae Ep1/96, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_014762:2428721*2428721245871529995Sulfuricurvum kujiense DSM 16994 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015185:1414453*1414453144663332181Desulfurobacterium thermolithotrophum DSM 11699 chromosome,3e-0765.9BLASTN svgBLASTP svg
NC_009348:2125698*2125698216701441317Aeromonas salmonicida subsp. salmonicida A449, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_013729:3573000*3573000359711224113Kribbella flavida DSM 17836, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_018868:282738*28273830817025433Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_020126:78964477896447792073324287Myxococcus stipitatus DSM 14675, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015422:1643000*1643000166547622477Alicycliphilus denitrificans K601 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_011992:1179084*1179084120383024747Acidovorax ebreus TPSY, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_008782:1277117*1277117129923122115Acidovorax sp. JS42, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_002939:2844240*2844240287693932700Geobacter sulfurreducens PCA, complete genome5e-0661.9BLASTN svgBLASTP svg