Pre_GI: BLASTN Hits

Some Help

Query: NC_006512:1722138 Idiomarina loihiensis L2TR, complete genome

Start: 1722138, End: 1746724, Length: 24587

Host Lineage: Idiomarina loihiensis; Idiomarina; Idiomarinaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This is the type strain for this organism, which was isolated from a hydrothermal vent at a depth of 1300 m from the Lo'ihi Seamount southeast of Hawaii. This organism grows optimally in salt concentrations of 7.5 to 10%. Genome comparison has suggested that the bacterium has maintained its amino acid transport and degradation systems but lost sugar transport and certain sugar metabolic genes suggesting that it lives on amino acids rather than sugars. This may be in keeping with the environment this organism grows in, which is at hydrothermal deep sea vents that are characterized by collections of proteinaceous particles. This organism may colonize these particles by producing exopolysaccharides.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012997:22540002254000228113427135Teredinibacter turnerae T7901, complete genome3e-160573BLASTN svgBLASTP svg
NC_006512:696000*69600071719521196Idiomarina loihiensis L2TR, complete genome3e-86327BLASTN svgBLASTP svg
NC_004347:71809171809175739939309Shewanella oneidensis MR-1, complete genome2e-25125BLASTN svgBLASTP svg
NC_007508:1221500*1221500126063139132Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_007508:20727382072738211001837281Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_007508:27834432783443280367620234Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_007508:3034718*3034718305615521438Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_007508:38650003865000390220337204Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_010943:929492943752228229Stenotrophomonas maltophilia K279a, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010943:30690823069082312471055629Stenotrophomonas maltophilia K279a, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010943:24990922499092252759928508Stenotrophomonas maltophilia K279a, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008321:3815940*3815940385514239203Shewanella sp. MR-4, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010694:63654*636548609922446Erwinia tasmaniensis, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010803:24270524270526959926895Chlorobium limicola DSM 245, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013592:446092*44609246819222101Dickeya dadantii Ech586, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008577:2818546*2818546284622227677Shewanella sp. ANA-3 chromosome 1, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_009800:32011532011533924219128Escherichia coli HS, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009800:289000*28900031038921390Escherichia coli HS, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009800:2788164*2788164280740719244Escherichia coli HS, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009800:20493462049346207518725842Escherichia coli HS, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009800:1254409*1254409127914624738Escherichia coli HS, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_004741:20097692009769203209922331Shigella flexneri 2a str. 2457T, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_004337:4374500*4374500439909924600Shigella flexneri 2a str. 301, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009800:349592*34959238017230581Escherichia coli HS, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009800:4529504*4529504454809918596Escherichia coli HS, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014563:19307193073832519019Pantoea vagans C9-1 plasmid pPag2, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_014121:4299500*4299500433477235273Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete5e-0867.9BLASTN svgBLASTP svg
NC_014121:398012*39801242358425573Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete5e-0867.9BLASTN svgBLASTP svg
NC_014121:36275883627588367459947012Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete5e-0867.9BLASTN svgBLASTP svg
NC_014121:35538093553809358001526207Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete5e-0867.9BLASTN svgBLASTP svg
NC_014121:2745097*2745097276822023124Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete5e-0867.9BLASTN svgBLASTP svg
NC_014107:17117017117019899927830Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,5e-0867.9BLASTN svgBLASTP svg
NC_010067:3204682*3204682322388819207Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete5e-0867.9BLASTN svgBLASTP svg
NC_007520:23056102305610232437818769Thiomicrospira crunogena XCL-2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010694:2971170*2971170300344632277Erwinia tasmaniensis, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_018697:1343756*1343756139248048725Cycloclasticus sp. P1 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013508:31889783188978324937660399Edwardsiella tarda EIB202, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012779:33168773316877333727020394Edwardsiella ictaluri 93-146, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012108:38249773824977384905524079Desulfobacterium autotrophicum HRM2, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_006512:728281*72828175150523225Idiomarina loihiensis L2TR, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008563:47393334739333476356524233Escherichia coli APEC O1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012917:985617985617100580620190Pectobacterium carotovorum subsp. carotovorum PC1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013956:32733403273340330380130462Pantoea ananatis LMG 20103 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_004431:4270305*4270305431798947685Escherichia coli CFT073, complete genome3e-0661.9BLASTN svgBLASTP svg