Pre_GI: BLASTN Hits

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Query: NC_002516:891000 Pseudomonas aeruginosa PAO1, complete genome

Start: 891000, End: 913571, Length: 22572

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008463:47432964743296476909925804Pseudomonas aeruginosa UCBPP-PA14, complete genome015930BLASTN svgBLASTP svg
NC_011770:49241274924127497209947973Pseudomonas aeruginosa LESB58, complete genome013050BLASTN svgBLASTP svg
NC_021150:43504614350461437377523315Azotobacter vinelandii CA6, complete genome2e-130474BLASTN svgBLASTP svg
NC_012560:43504654350465437377923315Azotobacter vinelandii DJ, complete genome2e-130474BLASTN svgBLASTP svg
NC_015410:1324313*1324313135087526563Pseudomonas mendocina NK-01 chromosome, complete genome1e-113418BLASTN svgBLASTP svg
NC_002516:14740001474000150946535466Pseudomonas aeruginosa PAO1, complete genome9e-105389BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome5e-100373BLASTN svgBLASTP svg
NC_004129:5846415*5846415588159935185Pseudomonas fluorescens Pf-5, complete genome5e-97363BLASTN svgBLASTP svg
NC_007005:49927304992730502132828599Pseudomonas syringae pv. syringae B728a, complete genome2e-35159BLASTN svgBLASTP svg
NC_004129:92647992647994509918621Pseudomonas fluorescens Pf-5, complete genome1e-29139BLASTN svgBLASTP svg
NC_005773:47972424797242481709919858Pseudomonas syringae pv. phaseolicola 1448A, complete genome6e-29137BLASTN svgBLASTP svg
NC_002947:53864895386489541416727679Pseudomonas putida KT2440, complete genome3e-27131BLASTN svgBLASTP svg
NC_010694:13242501324250134559221343Erwinia tasmaniensis, complete genome5e-26127BLASTN svgBLASTP svg
NC_008027:77589677589680259926704Pseudomonas entomophila L48, complete genome2e-25125BLASTN svgBLASTP svg
NC_007492:85742885742888733529908Pseudomonas fluorescens PfO-1, complete genome3e-24121BLASTN svgBLASTP svg
NC_010501:73436373436376909934737Pseudomonas putida W619, complete genome1e-23119BLASTN svgBLASTP svg
NC_015379:90890490890497110662203Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-22115BLASTN svgBLASTP svg
NC_020209:38748443874844390437229529Pseudomonas poae RE*1-1-14, complete genome8e-22113BLASTN svgBLASTP svg
NC_012660:57932005793200583260939410Pseudomonas fluorescens SBW25 chromosome, complete genome8e-22113BLASTN svgBLASTP svg
NC_012779:25861752586175261323427060Edwardsiella ictaluri 93-146, complete genome2e-19105BLASTN svgBLASTP svg
NC_010612:83564883564886299927352Mycobacterium marinum M, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_002927:37168943716894377039253499Bordetella bronchiseptica RB50, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_013961:24411482441148246091119764Erwinia amylovora, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_004347:30280003028000305021722218Shewanella oneidensis MR-1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012214:14384761438476146005421579Erwinia pyrifoliae Ep1/96, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013715:98000*9800012026222263Rothia mucilaginosa DY-18, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012997:36519933651993367433122339Teredinibacter turnerae T7901, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008570:4009762*4009762403215322392Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009446:17495117495122026945319Dichelobacter nodosus VCS1703A, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007912:3466966*3466966348462717662Saccharophagus degradans 2-40, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005810:11302511130251115417023920Yersinia pestis biovar Microtus str. 91001, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004088:3382148*3382148340611023963Yersinia pestis KIM, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003143:12331281233128125981426687Yersinia pestis CO92, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002945:47683547683550063823804Mycobacterium bovis AF2122/97, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002755:47287247287249645723586Mycobacterium tuberculosis CDC1551, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_000962:47581647581649961923804Mycobacterium tuberculosis H37Rv, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008149:3251196*3251196327595124756Yersinia pestis Nepal516, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008150:65089965089967359922701Yersinia pestis Antiqua, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_019950:48188148188150600724127Mycobacterium canettii CIPT 140060008 complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015848:48350048350050998826489Mycobacterium canettii CIPT 140010059, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012207:47750047750050076723268Mycobacterium bovis BCG str. Tokyo 172, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010159:14179931417993144109923107Yersinia pestis Angola, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009565:47950047950050278923290Mycobacterium tuberculosis F11, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009525:47709347709350092923837Mycobacterium tuberculosis H37Ra, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008769:50700050700053043423435Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010634:13423931342393136733024938Yersinia pseudotuberculosis PB1/+, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_004547:91355391355395334239790Erwinia carotovora subsp. atroseptica SCRI1043, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_020064:3609844*3609844365321743374Serratia marcescens FGI94, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015161:162000*16200018601224013Deinococcus proteolyticus MRP chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015061:37259213725921375022024300Rahnella sp. Y9602 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_004459:349500*34950040074451245Vibrio vulnificus CMCP6 chromosome I, complete sequence3e-0661.9BLASTN svgBLASTP svg