Pre_GI: BLASTP Hits

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Query: NC_018000:2964500:2979167 Sinorhizobium fredii USDA 257 chromosome, complete genome

Start: 2979167, End: 2981308, Length: 2142

Host Lineage: Sinorhizobium fredii; Sinorhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This organism, much like other Rhizobia, forms a symbiotic relationship with a leguminous plant, such as soybean, cowpea or pigeon pea. Expression of nodulation genes results in production of a nodulation signal which the plant cell recognizes inducing root nodule formation. The plant cell provides carbon compounds for the bacterium to grow on.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018000:2964500:2970050297005029718941845Sinorhizobium fredii USDA 257 chromosome, complete genomehypothetical protein1e-42175
NC_015675:4565500:4572666457266645743421677Mesorhizobium opportunistum WSM2075 chromosome, complete genomepeptidase C14 caspase catalytic subunit p203e-41170
NC_012881:2310141:2318411231841123195141104Desulfovibrio salexigens DSM 2638, complete genomepeptidase C14 caspase catalytic subunit p205e-34146
NC_016940:2843500:2859238285923828605001263Saprospira grandis str. Lewin chromosome, complete genomepeptidase C14, caspase catalytic subunit p203e-33144
NC_011894:2503639:2517451251745125199072457Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p203e-30134
NC_011894:7421867:7434437743443774374032967Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p205e-30133
NC_011894:3029964:3038773303877330411272355Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p203e-29130
NC_010511:637214:6417186417186448883171Methylobacterium sp. 4-46 chromosome, complete genomepeptidase C14 caspase catalytic subunit p202e-28127
NC_011894:2549076:2561841256184125649093069Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p203e-27124
NC_011894:6295807:6299486629948663026563171Methylobacterium nodulans ORS 2060, complete genomepeptidase C14 caspase catalytic subunit p208e-27122
NC_010830:1069666:1084709108470910867632055Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein2e-26121
NC_010830:1543548:1551922155192215561304209Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein3e-26120
NC_010830:1069666:1078070107807010809552886Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein8e-24112
NC_007614:109000:1097271097271111961470Nitrosospira multiformis ATCC 25196 chromosome 1, completeSel1-like repeat3e-23110
NC_013959:1195249:120238612023861203339954Sideroxydans lithotrophicus ES-1 chromosome, complete genomeSel1 domain protein repeat-containing protein6e-23109
NC_009720:4124255:4134233413423341361911959Xanthobacter autotrophicus Py2, complete genomepeptidase C14 caspase catalytic subunit p204e-22107
NC_010830:1124500:1137798113779811422794482Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein3e-22107
NC_010830:1069666:1080998108099810833672370Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein2e-22107
NC_015581:1731120:1737854173785417389481095Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeSel1 domain-containing protein repeat-containing protein2e-20101
NC_014394:1989418:199750619975061998492987Gallionella capsiferriformans ES-2 chromosome, complete genomeSel1 domain-containing protein repeat-containing protein2e-20101
NC_012856:737170:7819877819877834261440Ralstonia pickettii 12D chromosome 1, complete genomepeptidase C14 caspase catalytic subunit p203e-20100
NC_016048:1625812:1638521163852116414302910Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein1e-1999
NC_020908:2571943:259270125927012593405705Octadecabacter arcticus 238, complete genome3e-1997.8
NC_013355:1332263:133712113371211338068948Zymomonas mobilis subsp. mobilis NCIB 11163, complete genomeSel1 domain protein repeat-containing protein3e-1997.4
NC_016609:5763357:5770469577046957715811113Niastella koreensis GR20-10 chromosome, complete genomeSel1 domain-containing protein repeat-containing protein9e-1995.9
NC_010830:475248:507427507427508383957Candidatus Amoebophilus asiaticus 5a2, complete genome1e-1895.5
NC_018866:1279000:1285657128565712883352679Dehalobacter sp. DCA chromosome, complete genomehypothetical protein2e-1894.4
NC_018867:1357540:1364197136419713668752679Dehalobacter sp. CF chromosome, complete genomehypothetical protein2e-1894.4
NC_004431:1211000:1219723121972312208591137Escherichia coli CFT073, complete genomehypothetical protein5e-1893.6
NC_014394:1594071:1605189160518916064091221Gallionella capsiferriformans ES-2 chromosome, complete genomeSel1 domain-containing protein repeat-containing protein8e-1892.8
NC_013440:1436784:1444937144493714464001464Haliangium ochraceum DSM 14365, complete genomeSel1 domain protein repeat-containing protein9e-1892.4
NC_007512:944941:9620849620849635321449Pelodictyon luteolum DSM 273, complete genomeSel1-like repeat1e-1792.4
NC_015572:2186394:2191242219124221929961755Methylomonas methanica MC09 chromosome, complete genomeSel1 domain-containing protein repeat-containing protein1e-1792
NC_007946:1119000:1127725112772511288611137Escherichia coli UTI89, complete genomehypothetical protein2e-1791.7
NC_021184:3533500:3553185355318535558092625Desulfotomaculum gibsoniae DSM 7213, complete genomeTPR repeat-containing protein4e-1790.5
NC_015731:313676:315414315414316016603Nitrosomonas sp. Is79A3 chromosome, complete genomeSel1 domain-containing protein8e-1789.7
NC_004757:267165:2743522743522774503099Nitrosomonas europaea ATCC 19718, complete genomehypothetical protein8e-1789.4
NC_010830:475248:5044185044185074263009Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein5e-1686.7
NC_011149:1110642:112113511211351122100966Salmonella enterica subsp. enterica serovar Agona str. SL483,Sel1 domain protein repeat-containing protein6e-1686.7
NC_011837:3814000:3842625384262538454232799Clostridium kluyveri NBRC 12016, complete genomehypothetical protein8e-1686.3
NC_009706:3882500:3911122391112239139202799Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein8e-1686.3
NC_016791:3953972:3986298398629839893123015Clostridium sp. BNL1100 chromosome, complete genomehypothetical protein1e-1585.5
NC_017059:1:587658766664789Rhodospirillum photometricum DSM 122, complete genomeTPR repeat SEL1 subfamily2e-1584.7
NC_020908:1472981:148604014860401486744705Octadecabacter arcticus 238, complete genomesel-1-like repeats-containing protein2e-1584.7
NC_016048:4163225:4203176420317642059772802Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein3e-1584.3
NC_010830:384812:3939843939844012257242Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein3e-1584
NC_010830:1543548:1556591155659115582491659Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein5e-1583.6
NC_013355:1332263:1332263133226313340621800Zymomonas mobilis subsp. mobilis NCIB 11163, complete genomeSel1 domain protein repeat-containing protein7e-1583.2
NC_010830:1124500:1130165113016511357985634Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein1e-1482.4
NC_020418:2084937:209256220925622093266705Morganella morganii subsp. morganii KT, complete genomehypothetical protein1e-1482
NC_013740:1178370:1187448118744811893971950Acidaminococcus fermentans DSM 20731, complete genomeSel1 domain protein repeat-containing protein1e-1482
NC_019903:1345585:1386162138616213890682907Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,hypothetical protein2e-1481.6
NC_008347:3034100:3047264304726430485111248Maricaulis maris MCS10, complete genomeSel1 domain protein repeat-containing protein2e-1481.6
NC_006138:225832:2412732412732423401068Desulfotalea psychrophila LSv54, complete genomesimilar to TPR repeat proteins2e-1481.3
NC_010830:1637598:1645106164510616473012196Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein3e-1480.9
NC_011894:6295807:630494763049476305897951Methylobacterium nodulans ORS 2060, complete genomeSel1 domain protein repeat-containing protein3e-1480.9
NC_002939:2617037:262864526286452629286642Geobacter sulfurreducens PCA, complete genomehypothetical protein4e-1480.5
NC_010725:750911:7762137762137783032091Methylobacterium populi BJ001, complete genomepeptidase C14 caspase catalytic subunit p205e-1480.1
NC_010830:1543548:154751615475161548430915Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein7e-1479.7
NC_020908:2571943:2587957258795725891591203Octadecabacter arcticus 238, complete genomeputative Sel1-like protein2e-1378.2
NC_000921:1147394:116131911613191162089771Helicobacter pylori J99, complete genomehypothetical protein7e-1376.6
NC_014033:395000:4039554039554072753321Prevotella ruminicola 23 chromosome, complete genomehypothetical protein7e-1376.3
NC_014664:1360524:1377387137738713788711485Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomepeptidase C14 caspase catalytic subunit p201e-1275.5
NC_009445:7324977:7339392733939273413441953Bradyrhizobium sp. ORS 278 chromosome, complete genomehypothetical protein3e-1274.3
NC_014972:2089003:210678821067882107624837Desulfobulbus propionicus DSM 2032 chromosome, complete genomeSel1 domain-containing protein repeat-containing protein6e-1273.2
NC_009663:2500186:250582425058242506462639Sulfurovum sp. NBC37-1, complete genomehypothetical protein2e-1171.6
NC_017082:6444522:6469896646989664716501755Bradyrhizobium sp. S23321, complete genomehypothetical protein3e-1170.9
NC_015873:2197412:219972421997242200527804Megasphaera elsdenii DSM 20460, complete genomesel1 repeat protein4e-1170.5
NC_011146:1293202:130488213048821305700819Geobacter bemidjiensis Bem, complete genomeSel1 domain protein repeat-containing protein6e-1170.1
NC_016002:1048420:106260910626091063160552Pseudogulbenkiania sp. NH8B, complete genomeSel1 repeat-containing protein7e-1169.7
NC_008347:3034100:3048523304852330497341212Maricaulis maris MCS10, complete genomeSel1 domain protein repeat-containing protein9e-1169.3
NC_020541:2487427:2496873249687324984621590Rhodanobacter sp. 2APBS1, complete genomeTonB family protein1e-1068.9
NC_015275:2712991:2728346272834627293981053Clostridium lentocellum DSM 5427 chromosome, complete genomeSel1 domain protein repeat-containing protein1e-1068.9
NC_010337:803748:842510842510843208699Heliobacterium modesticaldum Ice1, complete genomehypothetical protein1e-1068.9
NC_014914:1327245:134485313448531345323471Taylorella equigenitalis MCE9 chromosome, complete genomehypothetical protein2e-1068.6
NC_017192:683493:683493683493684224732Arcobacter sp. L, complete genomehypothetical protein5e-1067
NC_020063:1194000:1200666120066612017361071Enterobacteriaceae bacterium strain FGI 57, complete genomeTPR repeat-containing protein8e-1066.2
NC_013416:1526920:153030415303041531014711Aggregatibacter actinomycetemcomitans D11S-1, complete genomeSel1 domain protein repeat-containing protein2e-0965.1
NC_016513:1859767:186545518654551866174720Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeSel1 domain-containing protein repeat-containing protein2e-0965.1
NC_015717:2479394:247939424793942480197804Hyphomicrobium sp. MC1, complete genomeSel1 domain-containing protein repeat-containing protein (fragment)3e-0964.3
NC_010830:1171781:1177610117761011814553846Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein1e-0862
NC_014828:2657623:2659251265925126633844134Ethanoligenens harbinense YUAN-3 chromosome, complete genomeSel1 domain protein repeat-containing protein2e-0861.6
NC_016831:947281:9514279514279535952169Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein3e-0861.2
NC_010830:692469:6924696924696958733405Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein3e-0861.2
NC_011205:2180598:2216872221687222190402169Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853tetratricopeptide repeat protein3e-0861.2
NC_011274:2044000:2080992208099220831602169Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-0861.2
NC_011294:2053991:2089859208985920920272169Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein3e-0861.2
NC_008060:1544920:1551205155120515527671563Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceSel1-like repeat3e-0860.8
NC_008544:615448:6312316312316327931563Burkholderia cenocepacia HI2424 chromosome 3, complete sequenceSel1 domain protein repeat-containing protein3e-0860.8
NC_016026:1969766:1972636197263619747802145Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeputative peptidoglycan binding domain-containing protein3e-0860.8
NC_010102:997417:99920499920410013722169Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-0860.8
NC_011149:1987291:2030281203028120324492169Salmonella enterica subsp. enterica serovar Agona str. SL483,tetratricopeptide repeat protein3e-0860.8
NC_013892:853366:873398873398874201804Xenorhabdus bovienii SS-2004 chromosome, complete genomebeta-lactamase1e-0759.3
NC_016002:1741109:1751412175141217531091698Pseudogulbenkiania sp. NH8B, complete genomeSel1 domain-containing protein1e-0758.9
NC_016002:2179969:2189763218976321914601698Pseudogulbenkiania sp. NH8B, complete genomeSel1 domain-containing protein1e-0758.9
NC_020908:2571943:259082325908232591314492Octadecabacter arcticus 238, complete genome1e-0758.9
NC_017171:1331794:133179413317941332264471Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomeTPR repeat-containing SEL1 subfamily protein2e-0758.5
NC_008149:1669921:1669921166992116720832163Yersinia pestis Nepal516, complete genomehypothetical protein2e-0758.5
NC_003143:2258636:2258636225863622607982163Yersinia pestis CO92, complete genomehypothetical protein2e-0758.5
NC_008150:1543635:1543635154363515457972163Yersinia pestis Antiqua, complete genomehypothetical protein2e-0758.5
NC_004088:2541033:2556053255605325582152163Yersinia pestis KIM, complete genomehypothetical protein2e-0758.5
NC_014029:2335021:2350041235004123522032163Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-0758.5
NC_017154:2258228:2258228225822822603902163Yersinia pestis D106004 chromosome, complete genomehypothetical protein2e-0758.5
NC_017265:2263347:2277011227701122791732163Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-0758.5
NC_009708:2392640:2407661240766124098232163Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-0758.5
NC_005810:2043730:2043730204373020458922163Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein2e-0758.5
NC_009381:1258396:1272647127264712748092163Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-0758.5
NC_010465:2428620:2443628244362824457902163Yersinia pseudotuberculosis YPIII, complete genomeSel1 domain protein repeat-containing protein2e-0758.5
NC_017121:2413000:241816024181602418876717Acetobacter pasteurianus IFO 3283-07, complete genomehypothetical protein2e-0758.2
NC_017111:2413000:241817324181732418889717Acetobacter pasteurianus IFO 3283-32, complete genomehypothetical protein2e-0758.2
NC_017108:2413000:241815524181552418871717Acetobacter pasteurianus IFO 3283-12, complete genomehypothetical protein2e-0758.2
NC_017100:2414075:242081824208182421534717Acetobacter pasteurianus IFO 3283-03, complete genomehypothetical protein2e-0758.2
NC_013209:2414500:241961124196112420327717Acetobacter pasteurianus IFO 3283-01, complete genomehypothetical protein2e-0758.2
NC_017125:2415500:242079824207982421514717Acetobacter pasteurianus IFO 3283-22, complete genomehypothetical protein2e-0758.2
NC_017146:2416000:242084024208402421556717Acetobacter pasteurianus IFO 3283-26, complete genomehypothetical protein2e-0758.2
NC_017150:2290681:232735723273572328073717Acetobacter pasteurianus IFO 3283-01-42C, complete genomehypothetical protein2e-0758.2
NC_006155:2334122:2334122233412223362842163Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-0758.2
NC_014010:1392536:1417827141782714189601134Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeSel1-like repeat protein2e-0758.2
NC_010634:2252329:2252329225232922544912163Yersinia pseudotuberculosis PB1/+, complete genomeSel1 domain-containing protein2e-0758.2
NC_017986:2687588:2696405269640526985792175Pseudomonas putida ND6 chromosome, complete genomeTPR repeat protein2e-0758.2
NC_015578:3011133:3022690302269030248432154Treponema primitia ZAS-2 chromosome, complete genomeSel1 domain-containing protein3e-0757.8
NC_010337:616304:6163046163046180881785Heliobacterium modesticaldum Ice1, complete genomehypothetical protein3e-0757.8
NC_005085:24623:484624846249127666Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein3e-0757.8
NC_010557:1030319:1036216103621610377541539Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceSel1 domain protein repeat-containing protein4e-0757.4
NC_010830:1543548:1568697156869715724463750Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein5e-0757
NC_019892:5171629:5196968519696851982271260Singulisphaera acidiphila DSM 18658 chromosome, complete genomehypothetical protein1e-0655.8
NC_018870:757416:7789717789717807461776Thermacetogenium phaeum DSM 12270 chromosome, complete genomeserine threonine protein phosphatase 51e-0655.5
NC_010830:923266:9301679301679342674101Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein2e-0655.1
NC_015276:3321277:333708633370863337595510Marinomonas mediterranea MMB-1 chromosome, complete genomeSel1 domain protein repeat-containing protein2e-0655.1
NC_014323:245979:2510822510822526351554Herbaspirillum seropedicae SmR1 chromosome, complete genomeTPR repeat containing, SEL1 subfamily3e-0654.3
NC_010995:1417329:1427662142766214288551194Cellvibrio japonicus Ueda107, complete genomeputative lipoprotein3e-0654.3
NC_010322:4623867:4637043463704346381401098Pseudomonas putida GB-1 chromosome, complete genomeSel1 domain-containing protein5e-0653.9
NC_014376:2964731:299116429911642992132969Clostridium saccharolyticum WM1 chromosome, complete genomepeptidase C14 caspase catalytic subunit p204e-0653.9
NC_004663:4373902:4380147438014743812921146Bacteroides thetaiotaomicron VPI-5482, complete genomehypothetical protein4e-0653.9
NC_017078:179848:1930951930951944291335Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1,hypothetical protein5e-0653.5
NC_015637:669593:6857096857096868541146Vibrio anguillarum 775 chromosome chromosome II, complete sequenceHypothetical protein5e-0653.5
NC_008529:887008:890773890773891351579Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeTPR repeat protein7e-0653.1
NC_009256:3540531:354177935417793542633855Burkholderia vietnamiensis G4 chromosome 1, complete sequenceSel1 domain-containing protein8e-0652.8
NC_011294:1085447:111163511116351112087453Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein9e-0652.8
NC_011274:1129686:114833411483341148786453Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein9e-0652.8