Pre_GI: BLASTP Hits

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Query: NC_017986:5467279:5473304 Pseudomonas putida ND6 chromosome, complete genome

Start: 5473304, End: 5473783, Length: 480

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009512:3068495:307945330794533079932480Pseudomonas putida F1, complete genomeputative transcriptional regulator, MerR family7e-84308
NC_004129:3965947:397081239708123971291480Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, MerR family2e-70264
NC_010125:74904:971789717897711534Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional regulator, MerR family6e-40162
NC_011001:2327633:234049923404992340948450Burkholderia cenocepacia J2315 chromosome 2, complete sequenceMerR family regulatory protein3e-39160
NC_017506:1785872:178587217858721786288417Marinobacter adhaerens HP15 chromosome, complete genomeMerR family transcriptional regulator6e-38156
NC_003296:140889:159311159311159769459Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE TRANSCRIPTION REGULATOR PROTEIN3e-35147
NC_011001:2327633:233684423368442337317474Burkholderia cenocepacia J2315 chromosome 2, complete sequenceMerR family regulatory protein2e-34144
NC_011992:1213726:121847812184781218864387Acidovorax ebreus TPSY, complete genometranscriptional regulator, MerR family6e-1476.6
NC_017904:3084872:309662730966273097076450Mycobacterium sp. MOTT36Y chromosome, complete genometranscriptional regulator2e-1375.1
NC_015146:144565:162656162656163048393Arthrobacter phenanthrenivorans Sphe3 plasmid pASPHE301, completetranscriptional regulator1e-1168.9
NC_014210:144036:146517146517146933417Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, MerR family1e-1168.6
NC_008712:250240:253388253388253939552Arthrobacter aurescens TC1 plasmid TC1, complete sequenceputative Transcriptional regulator, MerR family2e-1168.2
NC_009425:63709:883968839688821426Enterobacter sp. 638 plasmid pENTE01, complete sequenceMerR family transcriptional regulator2e-1168.2
NC_013440:3870697:388797238879723888379408Haliangium ochraceum DSM 14365, complete genometranscriptional regulator, MerR family5e-1167
NC_010602:2244729:233249123324912332883393Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'MerR family transcriptional regulator9e-1165.9
NC_010842:2310756:233787823378782338270393Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosometranscription regulator, SoxR-related9e-1165.9
NC_010519:1963256:197166419716641972068405Haemophilus somnus 2336 chromosome, complete genomeMerR family transcriptional regulator3e-1064.3
NC_010842:2250119:228158922815892281972384Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeSoxR-related transcriptional regulator5e-1063.5
NC_010842:2310756:231929623192962319679384Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeSoxR-related transcriptional regulator5e-1063.5
NC_010602:2244729:231391023139102314293384Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'MerR family transcriptional regulator5e-1063.5
NC_010602:2244729:227620322762032276586384Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'MerR family transcriptional regulator5e-1063.5
NC_008750:1253354:126126912612691261733465Shewanella sp. W3-18-1, complete genomeputative transcriptional regulator, MerR family1e-0962.4
NC_016614:686887:705585705585705971387Vibrio sp. EJY3 chromosome 2, complete sequenceCueR family transcriptional regulator1e-0962
NC_015671:3093596:310524731052473105645399Cellvibrio gilvus ATCC 13127 chromosome, complete genomeMerR family transcriptional regulator2e-0961.6
NC_015740:2998500:300896630089663009400435Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeputative MerR family transcriptional regulator2e-0961.2
NC_011420:69843:929229292293323402Rhodospirillum centenum SW, complete genomeHTH-type transcriptional regulator HmrR2e-0961.2
NC_007645:3478630:349719834971983497557360Hahella chejuensis KCTC 2396, complete genomepredicted transcriptional regulator3e-0960.8
NC_016616:1091606:109800110980011098429429Dechlorosoma suillum PS chromosome, complete genomeCu(I)-responsive transcriptional regulator4e-0960.8
NC_007498:1848437:186231018623101862723414Pelobacter carbinolicus DSM 2380, complete genomeputative heavy metal regulator HmrR7e-0959.7
NC_011753:3088952:310870531087053109169465Vibrio splendidus LGP32 chromosome 1, complete genometranscriptional regulator7e-0959.7
NC_017506:93494:947149471495127414Marinobacter adhaerens HP15 chromosome, complete genomeMerR family transcriptional regulator8e-0959.3
NC_015671:255808:293007293007293426420Cellvibrio gilvus ATCC 13127 chromosome, complete genomeMerR family transcriptional regulator1e-0859.3
NC_009040:43791:599605996060382423Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01, completeputative transcriptional regulator, MerR family1e-0858.9
NC_016113:994469:100038710003871000770384Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceMerR family transcriptional regulator1e-0858.9
NC_009434:3611738:369111736911173691755639Pseudomonas stutzeri A1501, complete genometranscriptional regulator1e-0858.9
NC_010571:5650806:565551656555165655920405Opitutus terrae PB90-1, complete genometranscriptional regulator, MerR family2e-0858.2
NC_004461:73390:832838328383690408Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein2e-0858.2
NC_008347:2515921:253804725380472538490444Maricaulis maris MCS10, complete genometranscriptional regulator, MerR family2e-0858.2
NC_011663:2568190:258565425856542586055402Shewanella baltica OS223 chromosome, complete genomeMerR family transcriptional regulator3e-0857.8
NC_014836:2919508:130781307813485408Desulfurispirillum indicum S5 chromosome, complete genomeCd(II)/Pb(II)-responsive transcriptional regulator3e-0857.8
NC_010571:5650806:5651894565189456574565563Opitutus terrae PB90-1, complete genome3e-0857.8
NC_010505:2690939:269694426969442697417474Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, MerR family3e-0857.4
NC_013947:4979000:498490749849074985344438Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, MerR family4e-0857.4
NC_008347:174000:190633190633191043411Maricaulis maris MCS10, complete genomeputative transcriptional regulator, MerR family5e-0857
NC_011901:491783:501562501562501963402Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeMerR family transcriptional regulator5e-0857
NC_016830:3230939:323708232370823237528447Pseudomonas fluorescens F113 chromosome, complete genomeMerR family transcriptional regulator5e-0857
NC_016109:4753493:475499747549974755362366Kitasatospora setae KM-6054, complete genomeputative MerR family transcriptional regulator5e-0857
NC_008750:450233:454399454399454806408Shewanella sp. W3-18-1, complete genomeputative transcriptional regulator, MerR family5e-0857
NC_009438:212476:216839216839217246408Shewanella putrefaciens CN-32 chromosome, complete genomeMerR family transcriptional regulator5e-0857
NC_009438:236424:239957239957240364408Shewanella putrefaciens CN-32 chromosome, complete genomeMerR family transcriptional regulator5e-0857
NC_008228:2450700:246720024672002467589390Pseudoalteromonas atlantica T6c, complete genometranscriptional regulator, MerR family6e-0856.6
NC_011206:2040000:205561320556132056089477Acidithiobacillus ferrooxidans ATCC 53993, complete genometranscriptional regulator, MerR family9e-0856.2
NC_011761:2131911:216757121675712168047477Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeCd(II)/Pb(II)-responsive transcriptional regulator9e-0856.2
NC_013446:3520500:352455735245573524946390Comamonas testosteroni CNB-2, complete genometranscriptional regulator, MerR family8e-0856.2
NC_012914:5194791:521082752108275211189363Paenibacillus sp. JDR-2, complete genometranscriptional regulator, MerR family8e-0856.2
NC_009439:918534:924888924888925319432Pseudomonas mendocina ymp, complete genomeMerR family transcriptional regulator7e-0856.2
NC_007952:1587500:159836415983641598771408Burkholderia xenovorans LB400 chromosome 2, complete sequenceTranscriptional regulator, MerR family7e-0856.2
NC_007951:3655088:366296836629683663375408Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, MerR family7e-0856.2
NC_007951:3655088:367436536743653674772408Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, MerR family7e-0856.2
NC_009668:529175:531374531374531790417Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceMerR family transcriptional regulator7e-0856.2
NC_007951:1711223:172356517235651723972408Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, MerR family7e-0856.2
NC_012483:1408500:144328314432831443693411Acidobacterium capsulatum ATCC 51196, complete genometranscriptional regulator, MerR family9e-0855.8
NC_013508:3387272:338925733892573389718462Edwardsiella tarda EIB202, complete genomezinc-responsive transcriptional regulator1e-0755.8
NC_018868:619113:626325626325626735411Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeMerR family transcriptional regulator2e-0755.1
CP002185:3627992:365167436516743652099426Escherichia coli W, complete genomeDNA-binding transcriptional activator in response to Zn(II)2e-0755.1
NC_014831:1906691:193368319336831934192510Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, MerR family2e-0755.1
NC_002947:4362271:436476643647664365137372Pseudomonas putida KT2440, complete genometranscriptional regulator, MerR family2e-0755.1
NC_013169:2423863:244360324436032444019417Kytococcus sedentarius DSM 20547, complete genometranscriptional regulator, MerR family2e-0754.7
NC_014815:5888934:589270858927085893130423Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, merr family2e-0754.7
NC_011662:2374955:238002023800202380475456Thauera sp. MZ1T, complete genometranscriptional regulator, MerR family2e-0754.7
NC_015186:2884866:288486628848662885333468Acidiphilium multivorum AIU301, complete genomeMerR family transcriptional regulator3e-0754.3
NC_016147:623666:638016638016638429414Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative transcriptional regulator3e-0754.3
NC_016514:1183356:119649111964911196919429Enterobacter cloacae EcWSU1 chromosome, complete genomemerR family transcriptional Regulator4e-0753.9
NC_014151:4021394:404725240472524047692441Cellulomonas flavigena DSM 20109 chromosome, complete genometranscriptional regulator, MerR family4e-0753.9
NC_009668:445134:485515485515485955441Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceMerR family transcriptional regulator5e-0753.5
NC_002927:2636694:265893026589302659364435Bordetella bronchiseptica RB50, complete genomeputative MerR-family transcriptional regulator6e-0753.5
NC_016048:1930089:1940209194020919416661458Oscillibacter valericigenes Sjm18-20, complete genomeputative MerR family transcriptional regulator6e-0753.5
NC_004129:2609189:262818226281822628571390Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, MerR family6e-0753.5
NC_011386:3723019:372685837268583727277420Oligotropha carboxidovorans OM5, complete genometranscriptional regulator, MerR family8e-0753.1
NC_018697:1343756:136580113658011366259459Cycloclasticus sp. P1 chromosome, complete genometranscriptional regulator7e-0753.1
NC_011992:1179084:119333011933301193809480Acidovorax ebreus TPSY, complete genometranscriptional regulator, MerR family7e-0753.1
NC_009720:3210387:322263632226363223058423Xanthobacter autotrophicus Py2, complete genomeMerR family transcriptional regulator7e-0753.1
NC_018697:1343756:138299313829931383400408Cycloclasticus sp. P1 chromosome, complete genomeCd(II)/Pb(II)-responsive transcriptional regulator7e-0753.1
NC_014964:1608575:161941216194121619804393Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeregulatory protein MerR6e-0753.1
NC_010321:1616362:162719916271991627591393Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeMerR family transcriptional regulator6e-0753.1
NC_006363:36959:583585835858759402Nocardia farcinica IFM 10152 plasmid pNF2, complete sequenceputative transcriptional regulator6e-0753.1
NC_011992:2279752:230185023018502302353504Acidovorax ebreus TPSY, complete genometranscriptional regulator, MerR family9e-0752.8
NC_008347:2515921:253843025384302538882453Maricaulis maris MCS10, complete genometranscriptional regulator, MerR family1e-0652.8
NC_008750:1253354:126959512695951270020426Shewanella sp. W3-18-1, complete genomeputative transcriptional regulator, MerR family1e-0652.4
NC_007951:4576825:460003546000354600433399Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, MerR family1e-0652.4
NC_013446:2820000:282079828207982821217420Comamonas testosteroni CNB-2, complete genometranscriptional regulator, MerR family1e-0652.4
NC_009138:1518315:153114315311431531580438Herminiimonas arsenicoxydans, complete genomeputative Bacterial regulatory protein, MerR1e-0652.4
NC_016114:1:137711377114121351Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeMerR family transcriptional regulator1e-0652
NC_012982:711122:733630733630734016387Hirschia baltica ATCC 49814, complete genometranscriptional regulator, MerR family2e-0652
NC_013921:755800:771016771016771408393Thermoanaerobacter italicus Ab9 chromosome, complete genometranscriptional regulator, MerR family2e-0652
NC_014209:787535:798612798612799004393Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,transcriptional regulator, MerR family2e-0652
NC_014152:554656:554656554656555087432Thermincola sp. JR, complete genometranscriptional regulator, MerR family2e-0652
NC_010067:3204682:321799332179933218325333Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-0651.6
NC_011138:3182807:319814931981493198544396Alteromonas macleodii 'Deep ecotype', complete genomeHg(II)-responsive transcriptional regulator2e-0651.6
NC_011312:3060371:307927830792783079697420Aliivibrio salmonicida LFI1238 chromosome chromosome 1, completetranscriptional regulator2e-0651.6
NC_006582:4256915:426207242620724262827756Bacillus clausii KSM-K16, complete genomehypothetical protein3e-0651.2
NC_011274:376970:398848398848399312465Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transcriptional regulator3e-0651.2
NC_010723:1465097:146844114684411469277837Clostridium botulinum E3 str. Alaska E43, complete genometranscriptional regulatory protein2e-0651.2
NC_000911:3075896:309124430912443091657414Synechocystis sp. PCC 6803, complete genomemercuric resistance operon regulatory protein2e-0651.2
NC_017039:3073724:308907230890723089485414Synechocystis sp. PCC 6803 substr. PCC-P, complete genomemercuric resistance operon regulatory protein MerR2e-0651.2
NC_017052:3073713:308906130890613089474414Synechocystis sp. PCC 6803 substr. PCC-N, complete genomemercuric resistance operon regulatory protein MerR2e-0651.2
NC_017277:3083494:309006130900613090474414Synechocystis sp. PCC 6803, complete genomemercuric resistance operon regulatory protein MerR2e-0651.2
NC_012587:2298324:230967123096712310054384Rhizobium sp. NGR234, complete genomeputative transcriptional regulator, MerR family2e-0651.2
NC_011083:403022:447987447987448451465Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,Cu(I)-responsive transcriptional regulator2e-0651.2
NC_003295:2507850:252154025215402521914375Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSCRIPTION REGULATOR PROTEIN2e-0651.2
NC_011080:383441:405320405320405784465Salmonella enterica subsp. enterica serovar Newport str. SL254,Cu(I)-responsive transcriptional regulator2e-0651.2
NC_011149:361765:383657383657384121465Salmonella enterica subsp. enterica serovar Agona str. SL483,Cu(I)-responsive transcriptional regulator2e-0651.2
NC_012125:373630:395509395509395973465Salmonella enterica subsp. enterica serovar Paratyphi C straintranscriptional regulator2e-0651.2
NC_008392:666000:680654680654681031378Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, MerR family4e-0650.8
NC_017506:3717261:373431737343173734760444Marinobacter adhaerens HP15 chromosome, complete genomeMerR family transcriptional regulator4e-0650.8
NC_008344:1:355913559136067477Nitrosomonas eutropha C91, complete genometranscriptional regulator, MerR family protein3e-0650.8
NC_010674:1496500:149822114982211499057837Clostridium botulinum B str. Eklund 17B, complete genometranscriptional regulatory protein5e-0650.4
NC_015731:1578106:160221816022181602658441Nitrosomonas sp. Is79A3 chromosome, complete genomeMarR family transcriptional regulator4e-0650.4
NC_008345:4107847:411554441155444115984441Shewanella frigidimarina NCIMB 400, complete genometranscriptional regulator, MerR family protein4e-0650.4
NC_008573:195317:213486213486213926441Shewanella sp. ANA-3 plasmid 1, complete sequencetranscriptional regulator, MerR family4e-0650.4
NC_016111:5369414:537814953781495378634486Streptomyces cattleya NRRL 8057, complete genomeHTH-type transcriptional activator soxR-like protein4e-0650.4
NC_018868:619113:639254639254639721468Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeMerR family transcriptional regulator5e-0650.1
NC_019842:484933:539448539448539852405Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,MerR family transcriptional regulator, mercuric resistance operon regulatory protein8e-0649.7
NC_020410:495184:534924534924535328405Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative transcriptional regulator (MerR family)8e-0649.7
NC_015422:2858228:286535728653572865800444Alicycliphilus denitrificans K601 chromosome, complete genomeMerR family transcriptional regulator8e-0649.7
NC_008782:2857899:286344128634412863956516Acidovorax sp. JS42, complete genomeputative transcriptional regulator, MerR family7e-0649.7
NC_009434:3611738:370624537062453706643399Pseudomonas stutzeri A1501, complete genomeMerR family transcriptional regulator7e-0649.7
NC_009656:115390:122118122118122516399Pseudomonas aeruginosa PA7 chromosome, complete genomeHg(II)-responsive transcriptional regulator7e-0649.7
NC_020272:3396800:339973233997323400136405Bacillus amyloliquefaciens IT-45, complete genomeHTH-type transcriptional regulator HmrR9e-0649.3
NC_009664:63230:673906739067755366Kineococcus radiotolerans SRS30216, complete genomeputative transcriptional regulator, MerR family9e-0649.3