Pre_GI: BLASTP Hits

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Query: NC_016830:3230939:3237082 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 3237082, End: 3237528, Length: 447

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009348:3819271:383360438336043833981378Aeromonas salmonicida subsp. salmonicida A449, complete genomeMerR family transcriptional regulator1e-21102
NC_007645:3478630:349719834971983497557360Hahella chejuensis KCTC 2396, complete genomepredicted transcriptional regulator6e-2199.4
NC_009512:3334579:335302733530273353410384Pseudomonas putida F1, complete genomeputative transcriptional regulator, MerR family1e-1892
NC_011901:491783:501562501562501963402Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeMerR family transcriptional regulator7e-1372.8
NC_008750:450233:454399454399454806408Shewanella sp. W3-18-1, complete genomeputative transcriptional regulator, MerR family7e-1372.8
NC_009438:212476:216839216839217246408Shewanella putrefaciens CN-32 chromosome, complete genomeMerR family transcriptional regulator7e-1372.8
NC_009438:236424:239957239957240364408Shewanella putrefaciens CN-32 chromosome, complete genomeMerR family transcriptional regulator7e-1372.8
NC_007951:1711223:172356517235651723972408Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, MerR family9e-1372.4
NC_007951:3655088:367436536743653674772408Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, MerR family9e-1372.4
NC_007951:3655088:366296836629683663375408Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, MerR family9e-1372.4
NC_007952:1587500:159836415983641598771408Burkholderia xenovorans LB400 chromosome 2, complete sequenceTranscriptional regulator, MerR family9e-1372.4
NC_014836:2919508:130781307813485408Desulfurispirillum indicum S5 chromosome, complete genomeCd(II)/Pb(II)-responsive transcriptional regulator1e-1272
NC_015740:2998500:300896630089663009400435Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeputative MerR family transcriptional regulator2e-1271.2
NC_009434:695582:762792762792763244453Pseudomonas stutzeri A1501, complete genometranscriptional regulator CadR2e-1270.9
NC_016614:686887:705585705585705971387Vibrio sp. EJY3 chromosome 2, complete sequenceCueR family transcriptional regulator8e-1269.3
NC_013446:3520500:352455735245573524946390Comamonas testosteroni CNB-2, complete genometranscriptional regulator, MerR family1e-1065.5
NC_009512:5632591:563709656370965637539444Pseudomonas putida F1, complete genomeputative transcriptional regulator, MerR family1e-1065.1
NC_014836:2919508:595459546361408Desulfurispirillum indicum S5 chromosome, complete genomeCd(II)/Pb(II)-responsive transcriptional regulator2e-1064.3
NC_008027:5533311:555116655511665551609444Pseudomonas entomophila L48, complete genometranscriptional regulator CadR2e-1064.3
NC_011992:2279752:229550822955082295906399Acidovorax ebreus TPSY, complete genometranscriptional regulator, MerR family2e-1064.3
NC_008344:49039:838088380884227420Nitrosomonas eutropha C91, complete genometranscriptional regulator, MerR family protein6e-1062.8
NC_018697:1343756:138299313829931383400408Cycloclasticus sp. P1 chromosome, complete genomeCd(II)/Pb(II)-responsive transcriptional regulator8e-1062.4
NC_008228:2450700:246720024672002467589390Pseudoalteromonas atlantica T6c, complete genometranscriptional regulator, MerR family9e-1062.4
NC_009434:3611738:369111736911173691755639Pseudomonas stutzeri A1501, complete genometranscriptional regulator1e-0962
NC_010410:3606826:361691536169153617337423Acinetobacter baumannii AYE, complete genomeputative transcriptional regulator (MerR family)1e-0962
NC_010410:3606826:368344636834463683868423Acinetobacter baumannii AYE, complete genomeputative transcriptional regulator (MerR family)1e-0962
NC_010611:240839:256993256993257400408Acinetobacter baumannii ACICU, complete genomepredicted transcriptional regulator1e-0962
NC_004129:2609189:262818226281822628571390Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, MerR family3e-0960.5
NC_011992:1213726:121847812184781218864387Acidovorax ebreus TPSY, complete genometranscriptional regulator, MerR family4e-0960.1
NC_017904:3084872:309662730966273097076450Mycobacterium sp. MOTT36Y chromosome, complete genometranscriptional regulator4e-0960.1
NC_009138:1518315:153114315311431531580438Herminiimonas arsenicoxydans, complete genomeputative Bacterial regulatory protein, MerR6e-0959.7
NC_008782:1917634:193523319352331935721489Acidovorax sp. JS42, complete genomeputative transcriptional regulator, MerR family1e-0858.5
NC_008573:195317:213486213486213926441Shewanella sp. ANA-3 plasmid 1, complete sequencetranscriptional regulator, MerR family1e-0858.5
NC_008345:4107847:411554441155444115984441Shewanella frigidimarina NCIMB 400, complete genometranscriptional regulator, MerR family protein1e-0858.5
NC_011001:2327633:233684423368442337317474Burkholderia cenocepacia J2315 chromosome 2, complete sequenceMerR family regulatory protein1e-0858.5
NC_009512:3068495:307945330794533079932480Pseudomonas putida F1, complete genomeputative transcriptional regulator, MerR family2e-0857.8
NC_015671:255808:293007293007293426420Cellvibrio gilvus ATCC 13127 chromosome, complete genomeMerR family transcriptional regulator2e-0857.8
NC_011386:3723019:372685837268583727277420Oligotropha carboxidovorans OM5, complete genometranscriptional regulator, MerR family3e-0857.4
NC_014152:554656:554656554656555087432Thermincola sp. JR, complete genometranscriptional regulator, MerR family3e-0857.4
NC_017986:5467279:547330454733045473783480Pseudomonas putida ND6 chromosome, complete genomeMerR family transcriptional regulator4e-0857
NC_008347:2515921:253843025384302538882453Maricaulis maris MCS10, complete genometranscriptional regulator, MerR family4e-0857
NC_015186:2908387:290995229099522910350399Acidiphilium multivorum AIU301, complete genomeMerR family transcriptional regulator6e-0856.6
NC_008347:2515921:253804725380472538490444Maricaulis maris MCS10, complete genometranscriptional regulator, MerR family5e-0856.6
NC_013446:2820000:282079828207982821217420Comamonas testosteroni CNB-2, complete genometranscriptional regulator, MerR family5e-0856.6
NC_009668:529175:531374531374531790417Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceMerR family transcriptional regulator6e-0856.2
NC_011662:2374955:238002023800202380475456Thauera sp. MZ1T, complete genometranscriptional regulator, MerR family7e-0856.2
NC_010602:2244729:227620322762032276586384Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'MerR family transcriptional regulator1e-0755.8
NC_010602:2244729:231391023139102314293384Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'MerR family transcriptional regulator1e-0755.8
NC_010842:2310756:231929623192962319679384Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeSoxR-related transcriptional regulator1e-0755.8
NC_010842:2250119:228158922815892281972384Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeSoxR-related transcriptional regulator1e-0755.8
NC_011206:2040000:205561320556132056089477Acidithiobacillus ferrooxidans ATCC 53993, complete genometranscriptional regulator, MerR family1e-0755.5
NC_011761:2131911:216757121675712168047477Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeCd(II)/Pb(II)-responsive transcriptional regulator1e-0755.5
CP002185:3627992:365167436516743652099426Escherichia coli W, complete genomeDNA-binding transcriptional activator in response to Zn(II)1e-0755.5
NC_008702:1432952:147196814719681472363396Azoarcus sp. BH72, complete genomeputative regulatory protein1e-0755.5
NC_014831:1906691:193368319336831934192510Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, MerR family1e-0755.5
NC_010162:10208521:102221181022211810222732615Sorangium cellulosum 'So ce 56', complete genomeMerR family transcriptional regulator1e-0755.1
NC_015671:3093596:310524731052473105645399Cellvibrio gilvus ATCC 13127 chromosome, complete genomeMerR family transcriptional regulator2e-0755.1
NC_004129:3965947:397081239708123971291480Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, MerR family2e-0755.1
NC_008782:1308007:131938513193851319819435Acidovorax sp. JS42, complete genomeputative transcriptional regulator, MerR family2e-0754.7
NC_011757:1091486:110969411096941110095402Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, MerR family3e-0754.3
NC_010125:74904:971789717897711534Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional regulator, MerR family3e-0754.3
NC_014815:5888934:589270858927085893130423Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, merr family3e-0753.9
NC_013939:1841890:185576718557671856183417Deferribacter desulfuricans SSM1, complete genomeMerR family transcriptional regulator3e-0753.9
NC_002927:2636694:265893026589302659364435Bordetella bronchiseptica RB50, complete genomeputative MerR-family transcriptional regulator3e-0753.9
NC_014151:4021394:404725240472524047692441Cellulomonas flavigena DSM 20109 chromosome, complete genometranscriptional regulator, MerR family4e-0753.9
NC_015422:2858228:286535728653572865800444Alicycliphilus denitrificans K601 chromosome, complete genomeMerR family transcriptional regulator4e-0753.5
NC_008782:2857899:286344128634412863956516Acidovorax sp. JS42, complete genomeputative transcriptional regulator, MerR family4e-0753.5
NC_009438:236424:250662250662251126465Shewanella putrefaciens CN-32 chromosome, complete genomeMerR family transcriptional regulator6e-0753.1
NC_020911:3475096:347754534775453477955411Octadecabacter antarcticus 307, complete genomeputative HTH-type transcriptional regulator8e-0752.8
NC_013947:4979000:498490749849074985344438Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, MerR family9e-0752.4
NC_004578:6334735:635795863579586358392435Pseudomonas syringae pv. tomato str. DC3000, complete genometranscriptional regulator, MerR family9e-0752.4
NC_011992:1179084:119333011933301193809480Acidovorax ebreus TPSY, complete genometranscriptional regulator, MerR family1e-0652.4
NC_003296:140889:159311159311159769459Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE TRANSCRIPTION REGULATOR PROTEIN1e-0652
NC_012982:711122:731780731780732181402Hirschia baltica ATCC 49814, complete genometranscriptional regulator, MerR family1e-0652
NC_017506:93494:947149471495127414Marinobacter adhaerens HP15 chromosome, complete genomeMerR family transcriptional regulator1e-0652
NC_015312:4658548:468161546816154682319705Pseudonocardia dioxanivorans CB1190 chromosome, complete genome2e-0651.6
NC_010519:1963256:197166419716641972068405Haemophilus somnus 2336 chromosome, complete genomeMerR family transcriptional regulator2e-0651.6
NC_009439:1297851:131795613179561318222267Pseudomonas mendocina ymp, complete genome2e-0651.6
NC_004578:5192110:521697452169745217408435Pseudomonas syringae pv. tomato str. DC3000, complete genometranscriptional regulator, MerR family2e-0651.2
NC_009439:918534:924888924888925319432Pseudomonas mendocina ymp, complete genomeMerR family transcriptional regulator2e-0651.2
NC_017506:1785872:178587217858721786288417Marinobacter adhaerens HP15 chromosome, complete genomeMerR family transcriptional regulator3e-0650.8
NC_016514:1183356:119649111964911196919429Enterobacter cloacae EcWSU1 chromosome, complete genomemerR family transcriptional Regulator3e-0650.8
NC_011992:2279752:230185023018502302353504Acidovorax ebreus TPSY, complete genometranscriptional regulator, MerR family3e-0650.8
NC_013508:3387272:338925733892573389718462Edwardsiella tarda EIB202, complete genomezinc-responsive transcriptional regulator3e-0650.8
NC_013960:1693643:170913517091351709623489Nitrosococcus halophilus Nc4 chromosome, complete genomeTranscription regulator MerR DNA binding protein3e-0650.8
NC_008782:1510000:153153815315381531945408Acidovorax sp. JS42, complete genomeputative transcriptional regulator, MerR family2e-0650.8
NC_016109:4088259:410598841059884106383396Kitasatospora setae KM-6054, complete genomeputative MerR family transcriptional regulator2e-0650.8
NC_011830:2177187:217718721771872178038852Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, MerR family5e-0650.1
NC_016147:623666:638016638016638429414Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative transcriptional regulator5e-0650.1
NC_009040:43791:599605996060382423Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01, completeputative transcriptional regulator, MerR family5e-0650.1
NC_011138:3182807:320451732045173204903387Alteromonas macleodii 'Deep ecotype', complete genomeHg(II)-responsive transcriptional regulator6e-0649.7
NC_010804:996837:103990310399031040310408Burkholderia multivorans ATCC 17616 chromosome 1, completeMerR family mercuric resistance operon regulatory protein6e-0649.7
NC_010084:2484000:248446324844632484870408Burkholderia multivorans ATCC 17616 chromosome 1, completeMerR family transcriptional regulator6e-0649.7
NC_012483:1408500:144328314432831443693411Acidobacterium capsulatum ATCC 51196, complete genometranscriptional regulator, MerR family7e-0649.3
NC_009668:445134:485515485515485955441Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceMerR family transcriptional regulator8e-0649.3
NC_013282:3962188:398362139836213984046426Cronobacter turicensis, complete genomeHTH-type transcriptional regulator zntR8e-0649.3