Pre_GI: BLASTP Hits

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Query: NC_013552:68003:94970 Dehalococcoides sp. VS, complete genome

Start: 94970, End: 96454, Length: 1485

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Isolation: Texas; Country: USA; Temp: Mesophile; Habitat: Fresh water, Groundwater. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009455:273519:2907222907222922061485Dehalococcoides sp. BAV1 chromosome, complete genomeradical SAM domain-containing protein0942
NC_007356:51080:7733677336788201485Dehalococcoides sp. CBDB1, complete genomeradical SAM/B12 binding domain protein0936
NC_014314:1:1298112981144441464Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeradical SAM domain-containing protein3e-170598
NC_009033:653462:6723696723696737931425Staphylothermus marinus F1, complete genomeRadical SAM domain protein5e-50199
NC_013849:19404:3305733057344541398Ferroglobus placidus DSM 10642 chromosome, complete genomeRadical SAM domain protein5e-47189
NC_008609:3672653:3680168368016836839203753Pelobacter propionicus DSM 2379, complete genomeglycosyl transferase, family 23e-43176
NC_009464:2523092:2544684254468425461291446Uncultured methanogenic archaeon RC-I, complete genomepredicted Fe-S cluster-binding oxidoreductase1e-38160
NC_011832:619874:6379966379966394651470Candidatus Methanosphaerula palustris E1-9c, complete genomeRadical SAM domain protein1e-37158
NC_015416:1571451:1573507157350715752581752Methanosaeta concilii GP-6 chromosome, complete genomeB12 binding domain/radical SAM domain fusion protein6e-37155
NC_002932:1851070:1855813185581318574531641Chlorobium tepidum TLS, complete genomemagnesium-protoporphyrin IX monomethyl ester oxidative cyclase, 66 kDa subunit2e-36153
NC_015388:719669:7410057410057428791875Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeRadical SAM domain protein1e-35151
NC_014507:1403000:1418340141834014198121473Methanoplanus petrolearius DSM 11571 chromosome, complete genomeRadical SAM domain-containing protein1e-35151
NC_008609:3732192:3741104374110437425611458Pelobacter propionicus DSM 2379, complete genomeMagnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase4e-35149
NC_007955:1664998:1681943168194316834061464Methanococcoides burtonii DSM 6242, complete genomeFe-S protein, radical SAM family9e-35148
NC_011060:2637893:2659239265923926608791641Pelodictyon phaeoclathratiforme BU-1, complete genomemagnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase1e-34147
NC_014960:1735786:1760110176011017617441635Anaerolinea thermophila UNI-1, complete genomehypothetical protein3e-34146
NC_013216:3376186:3394582339458233962401659Desulfotomaculum acetoxidans DSM 771, complete genomeRadical SAM domain protein3e-33143
NC_009615:1553556:1564365156436515658221458Parabacteroides distasonis ATCC 8503 chromosome, complete genomeFe-S oxidoreductase9e-33141
NC_014844:762794:7785687785687800221455Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeRadical SAM domain-containing protein4e-31136
NC_007954:1324062:1343878134387813455781701Shewanella denitrificans OS217, complete genomeRadical SAM6e-31135
NC_015682:205900:2467522467522481191368Thermodesulfobacterium sp. OPB45 chromosome, complete genomeRadical SAM domain-containing protein9e-31135
NC_010831:2078329:209216920921692093035867Chlorobium phaeobacteroides BS1, complete genomecobalamin B12-binding domain protein1e-30134
NC_008609:2787274:2792682279268227947062025Pelobacter propionicus DSM 2379, complete genomeMagnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase2e-30134
NC_013851:2211120:2221844222184422232921449Allochromatium vinosum DSM 180 chromosome, complete genomeRadical SAM domain protein5e-30132
NC_009075:15017:3925639256411991944Burkholderia pseudomallei 668 chromosome II, complete sequenceFe-S oxidoreductase3e-29130
NC_018645:4104302:4114112411411241155211410Desulfobacula toluolica Tol2, complete genomeradical SAM domain-containing protein3e-29129
NC_008639:2968000:2968727296872729705531827Chlorobium phaeobacteroides DSM 266, complete genomeMagnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase8e-29128
NC_007643:889755:8955118955118969651455Rhodospirillum rubrum ATCC 11170, complete genomeFe-S oxidoreductase2e-28127
NC_002939:2697767:2717042271704227196362595Geobacter sulfurreducens PCA, complete genomeTPR domain/radical SAM/B12 binding domain protein2e-28127
NC_011060:459615:5010805010805029091830Pelodictyon phaeoclathratiforme BU-1, complete genomeRadical SAM domain protein1e-27124
NC_014166:2959688:2960989296098929624491461Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeradical SAM domain-containing protein1e-26121
NC_011729:3955310:3971055397105539724911437Cyanothece sp. PCC 7424 chromosome, complete genomehopanoid biosynthesis associated radical SAM protein HpnJ6e-26119
NC_012797:1:2434224342258471506Desulfovibrio magneticus RS-1 plasmid pDMC1, complete sequencecobalamin vitamin B12-binding domain/radical SAM domain protein2e-25117
NC_020304:129321:1511821511821526781497Desulfocapsa sulfexigens DSM 10523, complete genomeFe-S oxidoreductase9e-24112
NC_010814:794211:8177818177818192501470Geobacter lovleyi SZ, complete genomeRadical SAM domain protein1e-23111
NC_009051:2365711:2375357237535723768291473Methanoculleus marisnigri JR1, complete genomeRadical SAM domain protein1e-23111
NC_015437:1685824:1693465169346516952371773Selenomonas sputigena ATCC 35185 chromosome, complete genomeRadical SAM domain protein6e-23109
NC_008609:3672653:3684329368432936859961668Pelobacter propionicus DSM 2379, complete genomeRadical SAM domain protein8e-23108
NC_003901:3207154:3212077321207732133541278Methanosarcina mazei Go1, complete genomehypothetical protein3e-22107
NC_015416:621513:6369866369866384461461Methanosaeta concilii GP-6 chromosome, complete genomeradical SAM domain-containing protein4e-22106
NC_018645:4104302:4131295413129541327641470Desulfobacula toluolica Tol2, complete genomeradical SAM domain-containing protein5e-22106
NC_000911:2777447:2777447277744727789461500Synechocystis sp. PCC 6803, complete genomeMg-protoporphyrin IX monomethyl ester oxidative cyclase 66 kD subunit1e-21105
NC_017039:2775275:2775275277527527767741500Synechocystis sp. PCC 6803 substr. PCC-P, complete genomeMg-protoporphyrin IX monomethyl ester oxidative cyclase1e-21105
NC_017052:2775263:2775263277526327767621500Synechocystis sp. PCC 6803 substr. PCC-N, complete genomeMg-protoporphyrin IX monomethyl ester oxidative cyclase1e-21105
NC_017277:2776264:2776264277626427777631500Synechocystis sp. PCC 6803, complete genomeMg-protoporphyrin IX monomethyl ester oxidative cyclase1e-21105
NC_008312:7546500:7570338757033875717681431Trichodesmium erythraeum IMS101, complete genomeRadical SAM6e-22105
NC_018664:985689:9878449878449896281785Clostridium acidurici 9a chromosome, complete genomecobalamin B12-binding/radical SAM domain-containing protein4e-21103
NC_018645:4490957:4512926451292645144161491Desulfobacula toluolica Tol2, complete genomecobalamin-binding radical SAM protein1e-20101
NC_014844:762794:7854937854937874962004Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeRadical SAM domain-containing protein8e-2099
NC_014623:659422:6682526682526698741623Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein1e-1997.8
NC_011567:2405000:2414483241448324159881506Anoxybacillus flavithermus WK1, complete genomeRadical SAM superfamily enzyme9e-1995.5
NC_008278:296526:3192483192483208161569Frankia alni ACN14a, complete genomeputative F-S oxidoreductase; putative methyltransferase.1e-1895.1
NC_011146:3991683:3998022399802239991311110Geobacter bemidjiensis Bem, complete genomeRadical SAM domain protein1e-1894.7
NC_009922:1917271:1933111193311119349071797Alkaliphilus oremlandii OhILAs, complete genomeRadical SAM domain protein5e-1892.8
NC_019977:2141677:2156291215629121573971107Methanomethylovorans hollandica DSM 15978, complete genomeB12-binding domain/radical SAM domain protein, MJ_1487 family1e-1791.7
NC_010571:5650806:5663592566359256650971506Opitutus terrae PB90-1, complete genomeRadical SAM domain protein2e-1790.5
NC_003366:1901898:1917270191727019189491680Clostridium perfringens str. 13, complete genomeMg-protoporphyrin IX monomethyl ester oxidative cyclase3e-1790.5
NC_008261:2117207:2132583213258321342621680Clostridium perfringens ATCC 13124, complete genomeradical SAM domain protein6e-1789.4
NC_005085:4157257:4168930416893041705461617Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein1e-1688.6
NC_020418:3022891:3022891302289130242371347Morganella morganii subsp. morganii KT, complete genomeBchE/P-methylase family protein1e-1688.2
NC_010723:2735196:2748496274849627501601665Clostridium botulinum E3 str. Alaska E43, complete genomeradical SAM domain protein1e-1688.2
NC_018645:4490957:4504623450462345059931371Desulfobacula toluolica Tol2, complete genomeradical SAM domain-containing protein5e-1686.3
NC_008262:1795914:1806633180663318083121680Clostridium perfringens SM101, complete genomeradical SAM domain protein4e-1686.3
NC_010506:2441944:2457737245773724592571521Shewanella woodyi ATCC 51908, complete genomeRadical SAM domain protein6e-1685.9
NC_009953:3316782:3332718333271833345951878Salinispora arenicola CNS-205 chromosome, complete genomeradical SAM domain-containing protein9e-1685.5
NC_011837:2567691:2582646258264625841631518Clostridium kluyveri NBRC 12016, complete genomehypothetical protein1e-1585.1
NC_014960:1697818:1733121173312117346291509Anaerolinea thermophila UNI-1, complete genomehypothetical protein1e-1585.1
NC_015275:1480500:1491270149127014926311362Clostridium lentocellum DSM 5427 chromosome, complete genomeRadical SAM domain protein1e-1585.1
NC_007759:1571425:1599922159992216012801359Syntrophus aciditrophicus SB, complete genomeFe-S oxidoreductase2e-1584.7
NC_016584:3847663:3859370385937038610671698Desulfosporosinus orientis DSM 765 chromosome, complete genomeFe-S oxidoreductase2e-1584.3
NC_010572:1081236:1084540108454010863931854Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative methyltransferase2e-1584
NC_013440:1698047:1713733171373317153551623Haliangium ochraceum DSM 14365, complete genomeRadical SAM domain protein4e-1583.2
NC_011899:1437981:1454795145479514561351341Halothermothrix orenii H 168, complete genomeRadical SAM domain protein6e-1582.8
NC_020453:6821500:6843477684347768450151539Agromonas oligotrophica S58 DNA, complete genomeFe-S oxidoreductase6e-1582.8
NC_013716:2139952:2189275218927521906211347Citrobacter rodentium ICC168, complete genomehypothetical protein7e-1582.4
NC_011027:760221:7688807688807703881509Chlorobaculum parvum NCIB 8327, complete genomeRadical SAM domain protein1e-1482
NC_012797:1:1133711337127821446Desulfovibrio magneticus RS-1 plasmid pDMC1, complete sequencehypothetical protein2e-1481.3
NC_002932:1798869:1801054180105418025561503Chlorobium tepidum TLS, complete genomeBchE/P-methylase family protein2e-1481.3
NC_014963:558000:5617885617885633531566Terriglobus saanensis SP1PR4 chromosome, complete genomeRadical SAM domain-containing protein3e-1480.5
NC_010674:2930259:2944183294418329458471665Clostridium botulinum B str. Eklund 17B, complete genomeradical SAM domain protein5e-1479.7
NC_015275:1480500:1494942149494214962671326Clostridium lentocellum DSM 5427 chromosome, complete genomeRadical SAM domain protein4e-1479.7
NC_007517:3344799:3358146335814633596601515Geobacter metallireducens GS-15, complete genomeRadical SAM9e-1478.6
NC_018604:233769:2395882395882410481461Brachyspira pilosicoli WesB complete genomeFe-S-oxidoreductase1e-1378.2
NC_016629:3496630:3507261350726135086971437Desulfovibrio africanus str. Walvis Bay chromosome, completeradical SAM protein1e-1378.2
NC_007954:1324062:1324799132479913267751977Shewanella denitrificans OS217, complete genomeRadical SAM2e-1377.8
NC_011830:4234392:4244459424445942458081350Desulfitobacterium hafniense DCB-2, complete genomeRadical SAM domain protein3e-1377
NC_005071:172364:1947251947251962991575Prochlorococcus marinus str. MIT 9313, complete genomehypothetical protein4e-1376.6
NC_013716:2139952:2186943218694321882531311Citrobacter rodentium ICC168, complete genomehypothetical protein9e-1375.5
NC_008820:211616:2295422295422311161575Prochlorococcus marinus str. MIT 9303, complete genomeFe-S oxidoreductase9e-1375.5
NC_013315:796313:7975837975837993371755Clostridium difficile CD196 chromosome, complete genomeadenosylcobamide-dependent radical SAM protein8e-1375.5
NC_017179:805867:8071378071378088911755Clostridium difficile BI1, complete genomeadenosylcobamide-dependent radical SAM protein8e-1375.5
NC_013716:2139952:2185603218560321869461344Citrobacter rodentium ICC168, complete genomehypothetical protein1e-1275.1
NC_002939:579087:5814875814875830011515Geobacter sulfurreducens PCA, complete genomeradical SAM domain protein1e-1275.1
NC_005125:4117096:4132911413291141345091599Gloeobacter violaceus PCC 7421, complete genomehypothetical protein1e-1275.1
NC_018607:2578433:2588442258844225899021461Brachyspira pilosicoli B2904 chromosome, complete genomeFe-S-oxidoreductase1e-1275.1
NC_014330:1541874:1548048154804815495081461Brachyspira pilosicoli 95/1000 chromosome, complete genomeFe-S-oxidoreductase1e-1274.7
NC_015275:1480500:1488671148867114899541284Clostridium lentocellum DSM 5427 chromosome, complete genomeRadical SAM domain protein2e-1274.7
NC_007907:3230513:3242134324213432435191386Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-1274.7
NC_015717:1723047:1747028174702817486711644Hyphomicrobium sp. MC1, complete genomeputative methyltransferase3e-1273.9
NC_014152:241776:2582242582242600351812Thermincola sp. JR, complete genomeRadical SAM domain protein3e-1273.9
NC_010334:3040589:3055072305507230570061935Shewanella halifaxensis HAW-EB4, complete genomeRadical SAM domain protein3e-1273.6
NC_013173:1259898:1271821127182112733291509Desulfomicrobium baculatum DSM 4028, complete genomeRadical SAM domain protein4e-1273.2
NC_018876:2151226:2170078217007821710791002Methanolobus psychrophilus R15 chromosome, complete genomehypothetical protein4e-1273.2
NC_015562:1299648:1321696132169613228591164Methanotorris igneus Kol 5 chromosome, complete genomeRadical SAM domain-containing protein2e-1171.2
NC_014844:442380:4655604655604670561497Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomecobalamin B12-binding domain-containing protein7e-1168.9
NC_008576:2011959:2021071202107120225431473Magnetococcus sp. MC-1, complete genomeRadical SAM domain protein8e-1168.9
NC_018645:4104302:4117566411756641191431578Desulfobacula toluolica Tol2, complete genomecobalamin-binding radical SAM protein1e-1068.6
NC_015275:1480500:1496325149632514976561332Clostridium lentocellum DSM 5427 chromosome, complete genomeRadical SAM domain protein1e-1068.6
NC_014623:5885903:5903003590300359050242022Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeradical sam domain-containing protein2e-1067.8
NC_014623:8798820:8819367881936788206621296Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein2e-1067.4
NC_011653:1339868:1349215134921513503451131Thermosipho africanus TCF52B, complete genomeFe-S oxidoreductase family protein3e-1067.4
NC_009376:1291901:1293927129392712953571431Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeradical SAM domain-containing protein4e-1066.6
NC_014973:4630132:4670770467077046721941425Geobacter sp. M18 chromosome, complete genomecobalamin B12-binding domain-containing protein6e-1066.2
NC_007626:3522265:3522265352226535245262262Magnetospirillum magneticum AMB-1, complete genomeFe-S oxidoreductase1e-0965.5
NC_009697:2680607:2694388269438826960671680Clostridium botulinum A str. ATCC 19397 chromosome, completeB12-binding Fe-S oxidoreductase1e-0965.1
NC_009483:3608000:3608342360834236096761335Geobacter uraniireducens Rf4 chromosome, complete genomeradical SAM domain-containing protein1e-0964.7
NC_015275:1480500:1489967148996714913161350Clostridium lentocellum DSM 5427 chromosome, complete genomeRadical SAM domain protein1e-0964.7
NC_018645:3029785:3049486304948630509461461Desulfobacula toluolica Tol2, complete genomecobalamin-binding, radical SAM protein2e-0963.9
NC_014152:241776:2562192562192580541836Thermincola sp. JR, complete genomeRadical SAM domain protein3e-0963.9
NC_000853:771746:7968027968027986011800Thermotoga maritima MSB8, complete genomehypothetical protein4e-0963.5
NC_005125:2456889:2477860247786024794731614Gloeobacter violaceus PCC 7421, complete genomehypothetical protein4e-0963.2
NC_013206:21288:3273632736340071272Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446Radical SAM domain protein6e-0962.8
NC_012563:2979147:2995558299555829972431686Clostridium botulinum A2 str. Kyoto, complete genomeputative B12-binding Fe-S oxidoreductase5e-0962.8
NC_011883:1182000:1198486119848612012542769Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,Radical SAM domain protein7e-0962.4
NC_013642:545464:5705055705055723041800Thermotoga naphthophila RKU-10, complete genomeRadical SAM domain protein8e-0962.4
NC_009975:1203372:1230965123096512322901326Methanococcus maripaludis C6, complete genomeRadical SAM domain protein1e-0862
NC_014844:1773424:1781867178186717831861320Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeRadical SAM domain-containing protein9e-0962
NC_010511:5467009:5482434548243454842931860Methylobacterium sp. 4-46 chromosome, complete genomecobalamin B12-binding domain-containing protein1e-0861.6
NC_011060:2099255:2110507211050721120841578Pelodictyon phaeoclathratiforme BU-1, complete genomeRadical SAM domain protein4e-0860.1
NC_011769:247202:2691932691932718862694Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeBeta tubulin, autoregulation binding site1e-0758.5
NC_017249:3406570:3416854341685434184461593Bradyrhizobium japonicum USDA 6, complete genomemethyltransferase2e-0757.8
NC_015425:906969:9111619111619128671707Clostridium botulinum BKT015925 chromosome, complete genomeputative B12-binding Fe-S oxidoreductase3e-0757
NC_013524:171524:1734281734281748671440Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeRadical SAM domain protein3e-0757
NC_015320:1260344:1276341127634112777891449Archaeoglobus veneficus SNP6 chromosome, complete genomeRadical SAM domain-containing protein9e-0755.5
NC_011978:493800:4986494986494997791131Thermotoga neapolitana DSM 4359, complete genomehypothetical protein9e-0755.5
NC_012108:4417483:4420191442019144220501860Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein8e-0755.5
NC_017051:993000:1015383101538310167201338Rickettsia prowazekii str. Dachau chromosome, complete genome(dimethylallyl)adenosine tRNA methylthiotransferase7e-0652.8
NC_017049:993863:1016140101614010174771338Rickettsia prowazekii str. Chernikova chromosome, complete genome(dimethylallyl)adenosine tRNA methylthiotransferase7e-0652.8
NC_017057:996000:1018453101845310197901338Rickettsia prowazekii str. RpGvF24 chromosome, complete genome(dimethylallyl)adenosine tRNA methylthiotransferase7e-0652.4
NC_017056:995500:1017781101778110191181338Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genome(dimethylallyl)adenosine tRNA methylthiotransferase7e-0652.4
NC_017050:995500:1017790101779010191271338Rickettsia prowazekii str. Katsinyian chromosome, complete genome(dimethylallyl)adenosine tRNA methylthiotransferase7e-0652.4
NC_017048:225980:2482942482942496311338Rickettsia prowazekii str. GvV257 chromosome, complete genome(dimethylallyl)adenosine tRNA methylthiotransferase7e-0652.4
NC_000963:995500:1017871101787110192081338Rickettsia prowazekii str. Madrid E, complete genomehypothetical protein7e-0652.4