Pre_GI Gene

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Host: NC_015275 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015275:1480500 Clostridium lentocellum DSM 5427 chromosome, complete genome

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
148064314819741332magnesium transporterQuickGO ontologyBLASTP
148221214838491638ABC-type transporter periplasmic subunitQuickGO ontologyBLASTP
14839421484904963ABC-type transporter integral membrane subunitQuickGO ontologyBLASTP
14849211485784864ABC-type transporter integral membrane subunitQuickGO ontologyBLASTP
14857891486784996oligopeptidedipeptide ABC transporter ATPase subunitQuickGO ontologyBLASTP
14867771487775999oligopeptidedipeptide ABC transporter ATPase subunitQuickGO ontologyBLASTP
14877861488511726peptidase C26QuickGO ontologyBLASTP
148867114899541284Radical SAM domain proteinQuickGO ontologyBLASTP
148996714913161350Radical SAM domain proteinQuickGO ontologyBLASTP
149127014926311362Radical SAM domain proteinQuickGO ontologyBLASTP
14926181493322705hypothetical proteinBLASTP
149333714948931557GH3 auxin-responsive promoterQuickGO ontologyBLASTP
149494214962671326Radical SAM domain proteinQuickGO ontologyBLASTP
149632514976561332Radical SAM domain proteinQuickGO ontologyBLASTP
149764014987011062hypothetical proteinBLASTP
14988301499192363transcriptional regulator PadR-like familyQuickGO ontologyBLASTP
149916415007351572cell cycle proteinQuickGO ontologyBLASTP
15013451502331987hypothetical proteinBLASTP