Pre_GI: BLASTP Hits

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Query: NC_015275:1480500:1494942 Clostridium lentocellum DSM 5427 chromosome, complete genome

Start: 1494942, End: 1496267, Length: 1326

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013716:2139952:2190621219062121919791359Citrobacter rodentium ICC168, complete genomehypothetical protein1e-106387
NC_020418:3022891:3024237302423730256311395Morganella morganii subsp. morganii KT, complete genomehypothetical protein5e-99361
NC_011830:4234392:4244459424445942458081350Desulfitobacterium hafniense DCB-2, complete genomeRadical SAM domain protein7e-63241
NC_015275:1480500:1488671148867114899541284Clostridium lentocellum DSM 5427 chromosome, complete genomeRadical SAM domain protein4e-62239
NC_013510:1637730:1661998166199816634311434Thermomonospora curvata DSM 43183, complete genomeRadical SAM domain protein2e-61237
NC_007907:3230513:3242134324213432435191386Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-61236
NC_013716:2139952:2185603218560321869461344Citrobacter rodentium ICC168, complete genomehypothetical protein6e-60231
NC_015275:1480500:1491270149127014926311362Clostridium lentocellum DSM 5427 chromosome, complete genomeRadical SAM domain protein7e-60231
NC_014973:4630132:4670770467077046721941425Geobacter sp. M18 chromosome, complete genomecobalamin B12-binding domain-containing protein9e-60231
NC_009483:3608000:3608342360834236096761335Geobacter uraniireducens Rf4 chromosome, complete genomeradical SAM domain-containing protein2e-53210
NC_015275:1480500:1496325149632514976561332Clostridium lentocellum DSM 5427 chromosome, complete genomeRadical SAM domain protein3e-53209
NC_013716:2139952:2186943218694321882531311Citrobacter rodentium ICC168, complete genomehypothetical protein9e-53207
NC_020418:3022891:3022891302289130242371347Morganella morganii subsp. morganii KT, complete genomeBchE/P-methylase family protein2e-50200
NC_011899:1437981:1454795145479514561351341Halothermothrix orenii H 168, complete genomeRadical SAM domain protein9e-50197
NC_013716:2139952:2189275218927521906211347Citrobacter rodentium ICC168, complete genomehypothetical protein6e-48191
NC_015388:719669:7410057410057428791875Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeRadical SAM domain protein3e-47189
NC_015275:1480500:1489967148996714913161350Clostridium lentocellum DSM 5427 chromosome, complete genomeRadical SAM domain protein8e-47188
NC_011059:2272747:2295649229564922970761428Prosthecochloris aestuarii DSM 271, complete genomeRadical SAM domain protein1e-43177
NC_015682:205900:2467522467522481191368Thermodesulfobacterium sp. OPB45 chromosome, complete genomeRadical SAM domain-containing protein3e-39162
NC_003901:3207154:3212077321207732133541278Methanosarcina mazei Go1, complete genomehypothetical protein1e-35151
NC_015416:621513:6369866369866384461461Methanosaeta concilii GP-6 chromosome, complete genomeradical SAM domain-containing protein7e-28125
NC_016631:2112175:2158773215877321603771605Granulicella mallensis MP5ACTX8 chromosome, complete genomeradical SAM protein2e-27123
NC_014963:558000:5617885617885633531566Terriglobus saanensis SP1PR4 chromosome, complete genomeRadical SAM domain-containing protein2e-27123
NC_011837:2567691:2582646258264625841631518Clostridium kluyveri NBRC 12016, complete genomehypothetical protein8e-26118
NC_015717:1723047:1747028174702817486711644Hyphomicrobium sp. MC1, complete genomeputative methyltransferase2e-24114
NC_014960:1697818:1733121173312117346291509Anaerolinea thermophila UNI-1, complete genomehypothetical protein2e-23110
NC_007517:3344799:3358146335814633596601515Geobacter metallireducens GS-15, complete genomeRadical SAM1e-22107
NC_002939:579087:5814875814875830011515Geobacter sulfurreducens PCA, complete genomeradical SAM domain protein2e-21104
NC_008820:211616:2295422295422311161575Prochlorococcus marinus str. MIT 9303, complete genomeFe-S oxidoreductase4e-21103
NC_005071:172364:1947251947251962991575Prochlorococcus marinus str. MIT 9313, complete genomehypothetical protein7e-21102
NC_013173:1259898:1271821127182112733291509Desulfomicrobium baculatum DSM 4028, complete genomeRadical SAM domain protein5e-21102
NC_013849:19404:3305733057344541398Ferroglobus placidus DSM 10642 chromosome, complete genomeRadical SAM domain protein9e-21101
NC_009033:653462:6723696723696737931425Staphylothermus marinus F1, complete genomeRadical SAM domain protein9e-21101
NC_017249:3406570:3416854341685434184461593Bradyrhizobium japonicum USDA 6, complete genomemethyltransferase3e-1996.7
NC_005125:4117096:4132911413291141345091599Gloeobacter violaceus PCC 7421, complete genomehypothetical protein2e-1894.4
NC_008609:3732192:3741104374110437425611458Pelobacter propionicus DSM 2379, complete genomeMagnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase2e-1894
NC_002932:1798869:1801054180105418025561503Chlorobium tepidum TLS, complete genomeBchE/P-methylase family protein9e-1891.7
NC_005027:5640680:5656076565607656579621887Rhodopirellula baltica SH 1, complete genomeprobable methyltransferase or Fe-S oxidoreductase4e-1789.7
NC_011060:459615:5010805010805029091830Pelodictyon phaeoclathratiforme BU-1, complete genomeRadical SAM domain protein3e-1789.7
NC_008312:7546500:7570338757033875717681431Trichodesmium erythraeum IMS101, complete genomeRadical SAM3e-1789.7
NC_011027:760221:7688807688807703881509Chlorobaculum parvum NCIB 8327, complete genomeRadical SAM domain protein8e-1788.6
NC_002932:1851070:1855813185581318574531641Chlorobium tepidum TLS, complete genomemagnesium-protoporphyrin IX monomethyl ester oxidative cyclase, 66 kDa subunit2e-1584.3
NC_007356:51080:7733677336788201485Dehalococcoides sp. CBDB1, complete genomeradical SAM/B12 binding domain protein2e-1584
NC_009615:1553556:1564365156436515658221458Parabacteroides distasonis ATCC 8503 chromosome, complete genomeFe-S oxidoreductase3e-1583.6
NC_011729:3955310:3971055397105539724911437Cyanothece sp. PCC 7424 chromosome, complete genomehopanoid biosynthesis associated radical SAM protein HpnJ4e-1583.2
NC_009455:273519:2907222907222922061485Dehalococcoides sp. BAV1 chromosome, complete genomeradical SAM domain-containing protein8e-1582
NC_020453:6821500:6843477684347768450151539Agromonas oligotrophica S58 DNA, complete genomeFe-S oxidoreductase2e-1481.3
NC_008639:2968000:2968727296872729705531827Chlorobium phaeobacteroides DSM 266, complete genomeMagnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase4e-1479.7
NC_015416:621513:6384846384846398691386Methanosaeta concilii GP-6 chromosome, complete genomeradical SAM domain-containing protein1e-1378.2
NC_013552:68003:9497094970964541485Dehalococcoides sp. VS, complete genomeradical SAM/B12 binding domain protein1e-1377.8
NC_011060:2637893:2659239265923926608791641Pelodictyon phaeoclathratiforme BU-1, complete genomemagnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase2e-1377.8
NC_020304:129321:1511821511821526781497Desulfocapsa sulfexigens DSM 10523, complete genomeFe-S oxidoreductase2e-1377
NC_015416:1571451:1573507157350715752581752Methanosaeta concilii GP-6 chromosome, complete genomeB12 binding domain/radical SAM domain fusion protein1e-1274.7
NC_009051:2365711:2375357237535723768291473Methanoculleus marisnigri JR1, complete genomeRadical SAM domain protein2e-1170.5
NC_008609:3672653:3680168368016836839203753Pelobacter propionicus DSM 2379, complete genomeglycosyl transferase, family 24e-1170.1
NC_014844:762794:7785687785687800221455Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeRadical SAM domain-containing protein4e-1169.7
NC_013440:1698047:1713733171373317153551623Haliangium ochraceum DSM 14365, complete genomeRadical SAM domain protein3e-1066.6
NC_005125:2456889:2477860247786024794731614Gloeobacter violaceus PCC 7421, complete genomehypothetical protein5e-1066.2
NC_007954:1324062:1343878134387813455781701Shewanella denitrificans OS217, complete genomeRadical SAM5e-1066.2
NC_002939:2697767:2717042271704227196362595Geobacter sulfurreducens PCA, complete genomeTPR domain/radical SAM/B12 binding domain protein2e-0964.3
NC_014623:659422:6682526682526698741623Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein4e-0963.2
NC_009464:2523092:2544684254468425461291446Uncultured methanogenic archaeon RC-I, complete genomepredicted Fe-S cluster-binding oxidoreductase6e-0962.4
NC_009975:1203372:1230965123096512322901326Methanococcus maripaludis C6, complete genomeRadical SAM domain protein8e-0962
NC_007955:1664998:1681943168194316834061464Methanococcoides burtonii DSM 6242, complete genomeFe-S protein, radical SAM family1e-0861.2
NC_014960:1735786:1760110176011017617441635Anaerolinea thermophila UNI-1, complete genomehypothetical protein2e-0861.2
NC_008576:2011959:2021071202107120225431473Magnetococcus sp. MC-1, complete genomeRadical SAM domain protein3e-0860.1
NC_013851:2211120:2221844222184422232921449Allochromatium vinosum DSM 180 chromosome, complete genomeRadical SAM domain protein3e-0860.1
NC_015562:1299648:1321696132169613228591164Methanotorris igneus Kol 5 chromosome, complete genomeRadical SAM domain-containing protein5e-0859.3
NC_014658:743453:7607717607717620601290Methanothermus fervidus DSM 2088 chromosome, complete genomeradical sam domain protein8e-0858.9
NC_014166:2959688:2960989296098929624491461Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeradical SAM domain-containing protein1e-0758.5
NC_011146:3991683:3998022399802239991311110Geobacter bemidjiensis Bem, complete genomeRadical SAM domain protein1e-0758.2
NC_010831:2078329:209216920921692093035867Chlorobium phaeobacteroides BS1, complete genomecobalamin B12-binding domain protein2e-0757.8
NC_005085:4157257:4168930416893041705461617Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein3e-0756.6
NC_018645:4490957:4512926451292645144161491Desulfobacula toluolica Tol2, complete genomecobalamin-binding radical SAM protein4e-0756.6
NC_018645:4490957:4504623450462345059931371Desulfobacula toluolica Tol2, complete genomeradical SAM domain-containing protein4e-0756.2
NC_019977:2141677:2156291215629121573971107Methanomethylovorans hollandica DSM 15978, complete genomeB12-binding domain/radical SAM domain protein, MJ_1487 family9e-0755.5