Pre_GI: BLASTP Hits

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Query: NC_015275:1480500:1493337 Clostridium lentocellum DSM 5427 chromosome, complete genome

Start: 1493337, End: 1494893, Length: 1557

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015711:2542051:2560420256042025620841665Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein3e-68259
NC_008095:8698766:8698766869876687004331668Myxococcus xanthus DK 1622, complete genomehypothetical protein4e-67256
NC_010515:1491590:1496232149623214978121581Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceGH3 auxin-responsive promoter3e-65249
NC_013716:2139952:2192019219201921935511533Citrobacter rodentium ICC168, complete genomehypothetical protein4e-56219
NC_020418:3022891:3025631302563130271691539Morganella morganii subsp. morganii KT, complete genomeAuxin-responsive GH3-related protein3e-51203
NC_013851:3166969:3184942318494231866241683Allochromatium vinosum DSM 180 chromosome, complete genomeGH3 auxin-responsive promoter1e-26121
NC_015578:3442866:3463528346352834652281701Treponema primitia ZAS-2 chromosome, complete genomeGH3 auxin-responsive promoter superfamily3e-23110
NC_013851:3166969:3188785318878531913402556Allochromatium vinosum DSM 180 chromosome, complete genomealpha-L-glutamate ligase, RimK family3e-1997.1
NC_011001:63986:7523675236769181683Burkholderia cenocepacia J2315 chromosome 2, complete sequencehypothetical protein3e-1273.9