Pre_GI: BLASTP Hits

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Query: NC_015275:1480500:1498830 Clostridium lentocellum DSM 5427 chromosome, complete genome

Start: 1498830, End: 1499192, Length: 363

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018664:2638102:264078026407802641118339Clostridium acidurici 9a chromosome, complete genometranscriptional regulator, PadR family3e-29126
NC_015589:814530:827671827671828009339Desulfotomaculum ruminis DSM 2154 chromosome, complete genometranscriptional regulator PadR family protein1e-26118
NC_015690:6595395:660345166034516603786336Paenibacillus mucilaginosus KNP414 chromosome, complete genomePadR-like family transcriptional regulator3e-22103
NC_007907:4956500:496671849667184967065348Desulfitobacterium hafniense Y51, complete genomehypothetical protein8e-22102
NC_011830:1037520:105271710527171053064348Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, PadR-like family7e-2199
NC_019897:700332:733396733396733758363Thermobacillus composti KWC4 chromosome, complete genometranscriptional regulator8e-1992.4
NC_012673:785718:792796792796793152357Exiguobacterium sp. AT1b, complete genometranscriptional regulator, PadR-like family1e-1788.6
NC_009464:931647:932620932620932970351Uncultured methanogenic archaeon RC-I, complete genomeputative transcription regulator (PadR family)1e-1788.2
NC_013665:1766158:179097717909771791321345Methanocella paludicola SANAE, complete genomeputative PadR-like family transcriptional regulator9e-1682.4
NC_004193:375416:420145420145420480336Oceanobacillus iheyensis HTE831, complete genomehypothetical protein3e-1580.5
NC_004722:1008500:101926110192611019602342Bacillus cereus ATCC 14579, complete genomeTranscriptional regulator, PadR family2e-1477.8
NC_017208:1050414:106205310620531062385333Bacillus thuringiensis serovar chinensis CT-43 chromosome, completePadR family transcriptional regulator2e-1477.4
NC_011725:1032500:104332810433281043660333Bacillus cereus B4264 chromosome, complete genomePadR family transcriptional regulator2e-1477.4
NC_010184:1017000:102748510274851027817333Bacillus weihenstephanensis KBAB4, complete genometranscriptional regulator, PadR-like family4e-1476.6
NC_014171:1018338:102901910290191029351333Bacillus thuringiensis BMB171 chromosome, complete genomePadR family transcriptional regulator5e-1476.6
NC_014393:4352216:437518143751814375525345Clostridium cellulovorans 743B chromosome, complete genometranscriptional regulator, PadR-like family7e-1475.9
NC_015690:790500:804304804304804633330Paenibacillus mucilaginosus KNP414 chromosome, complete genomePadR-like family transcriptional regulator7e-1475.9
NC_016935:789849:805610805610805939330Paenibacillus mucilaginosus 3016 chromosome, complete genomePadR-like family transcriptional regulator6e-1475.9
NC_003366:863437:878020878020878352333Clostridium perfringens str. 13, complete genome30S ribosomal protein homolog2e-1374.7
NC_012483:996555:101723810172381017600363Acidobacterium capsulatum ATCC 51196, complete genometranscriptional regulator, PadR family2e-1374.7
NC_008278:2813362:282291428229142823243330Frankia alni ACN14a, complete genomePutative PadR family transcriptional regulator3e-1373.6
NC_014323:3976351:401955840195584019887330Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein4e-1373.6
NC_014393:4612301:463298446329844633328345Clostridium cellulovorans 743B chromosome, complete genometranscriptional regulator, PadR-like family7e-1372.8
NC_008261:817295:834077834077834409333Clostridium perfringens ATCC 13124, complete genometranscriptional regulator, PadR family9e-1372
NC_014328:3747973:375165537516553751996342Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative PadR family transcriptional regulator4e-1269.7
NC_009328:293000:348394348394348717324Geobacillus thermodenitrificans NG80-2 chromosome, complete genometranscriptional regulator2e-1167.8
NC_007644:2452244:246911124691112469470360Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, PadR-like family2e-1167.4
NC_013739:2057781:207558820755882075941354Conexibacter woesei DSM 14684, complete genometranscriptional regulator, PadR-like family3e-1167.4
NC_014330:1010000:101901510190151019344330Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative transcriptional regulator8e-1165.9
NC_019908:2183215:219799821979982198327330Brachyspira pilosicoli P43/6/78 chromosome, complete genometranscriptional regulator8e-1165.9
NC_009712:334143:337653337653337979327Candidatus Methanoregula boonei 6A8, complete genomePadR-like family transcriptional regulator7e-1165.9
NC_013730:4573077:459200745920074592351345Spirosoma linguale DSM 74, complete genometranscriptional regulator, PadR-like family7e-1165.9
NC_010184:4497473:450447345044734504817345Bacillus weihenstephanensis KBAB4, complete genometranscriptional regulator, PadR-like family4e-1063.5
NC_015434:228912:250216250216250554339Verrucosispora maris AB-18-032 chromosome, complete genomePadR-like family transcriptional regulator5e-1063.2
NC_005957:4472800:447576544757654476109345Bacillus thuringiensis serovar konkukian str. 97-27, completepossible transcriptional regulator, PadR family5e-1063.2
NC_014335:4414052:441474244147424415086345Bacillus cereus biovar anthracis str. CI chromosome, completeputative PadR family transcriptional regulator7e-1062.8
NC_019908:21970:400324003240364333Brachyspira pilosicoli P43/6/78 chromosome, complete genomehypothetical protein2e-0960.8
NC_013037:6209424:621816562181656218518354Dyadobacter fermentans DSM 18053, complete genometranscriptional regulator, PadR-like family4e-0960.1
NC_014963:4416339:442588144258814426225345Terriglobus saanensis SP1PR4 chromosome, complete genomePadR family transcriptional regulator1e-0858.5
NC_008009:2430509:244906824490682449397330Acidobacteria bacterium Ellin345, complete genometranscriptional regulator, PadR-like family4e-0857
NC_015690:2039215:204633620463362046665330Paenibacillus mucilaginosus KNP414 chromosome, complete genomePadR-like family transcriptional regulator6e-0856.2
NC_014963:4091910:410257441025744102915342Terriglobus saanensis SP1PR4 chromosome, complete genomePadR family transcriptional regulator7e-0855.8
NC_006348:2738425:275557927555792755920342Burkholderia mallei ATCC 23344 chromosome 1, complete sequencetranscriptional regulator, PadR family9e-0855.8
NC_014624:828943:843139843139843462324Eubacterium limosum KIST612 chromosome, complete genometranscription regulator (putative)9e-0855.5
NC_013730:2751484:278794927879492788323375Spirosoma linguale DSM 74, complete genometranscriptional regulator, PadR-like family1e-0755.5
NC_012778:364728:368015368015368353339Eubacterium eligens ATCC 27750, complete genomehypothetical protein1e-0755.1
NC_003888:3111998:311595731159573116334378Streptomyces coelicolor A3(2), complete genomehypothetical protein2e-0754.7
NC_018704:1424728:142569314256931426040348Amphibacillus xylanus NBRC 15112, complete genomeputative PadR family transcriptional regulator2e-0754.7
NC_016109:8635989:863794386379438638305363Kitasatospora setae KM-6054, complete genomeputative PadR family transcriptional regulator3e-0753.9
NC_014963:4416339:441861944186194418948330Terriglobus saanensis SP1PR4 chromosome, complete genomePadR family transcriptional regulator7e-0752.4
NC_017059:1727095:173115517311551731733579Rhodospirillum photometricum DSM 122, complete genomePadR family transcriptional regulator1e-0651.6
NC_015216:1278706:131078813107881311147360Methanobacterium sp. AL-21 chromosome, complete genomePadR-like family transcriptional regulator1e-0651.6
NC_015144:367278:373210373210373542333Weeksella virosa DSM 16922 chromosome, complete genometranscriptional regulator, PadR-like family2e-0651.6
NC_012483:1813521:181914618191461819487342Acidobacterium capsulatum ATCC 51196, complete genometranscriptional regulator, PadR family, putative2e-0651.2
NC_011773:4541306:454435645443564544616261Bacillus cereus AH820 chromosome, complete genomePadR family transcriptional regulator2e-0651.2
NC_016935:2567039:259505025950502595394345Paenibacillus mucilaginosus 3016 chromosome, complete genomePadR-like family transcriptional regulator2e-0650.8
NC_019791:1189908:120726812072681207747480Caldisphaera lagunensis DSM 15908 chromosome, complete genometranscriptional regulator3e-0650.4
NC_016048:2343500:235035923503592350718360Oscillibacter valericigenes Sjm18-20, complete genomeputative PadR family transcriptional regulator3e-0650.4
NC_011660:1889504:189448518944851894811327Listeria monocytogenes HCC23 chromosome, complete genomePadR family transcriptional regulator4e-0650.4
NC_007929:111092:122941122941123261321Lactobacillus salivarius subsp. salivarius UCC118, complete genomeTranscriptional regulator, PadR family4e-0650.1
NC_006582:2205154:221626422162642216584321Bacillus clausii KSM-K16, complete genometranscriptional regulator, PadR family4e-0650.1
NC_018748:495011:494685494685495014330Emticicia oligotrophica DSM 17448 chromosome, complete genometranscriptional regulator, PadR-like family7e-0649.3
NC_014958:3131191:313175231317523132108357Deinococcus maricopensis DSM 21211 chromosome, complete genomePadR family transcriptional regulator7e-0649.3