Pre_GI Gene

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Host: NC_008278 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008278:296526 Frankia alni ACN14a, complete genome

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2965262990902565hypothetical protein
2991903006321443hypothetical proteinBLASTP
3006293033312703serinethreonine protein phosphataseQuickGO ontologyBLASTP
3036833051191437putative integraserecombinaseQuickGO ontologyBLASTP
305266305547282hypothetical protein putative TonB boxQuickGO ontologyBLASTP
306759307010252hypothetical protein putative signal peptideQuickGO ontology
307034307252219hypothetical protein
307318307977660hypothetical proteinBLASTP
307974308765792Putative regulatory protein KorSA GntR-family transcriptional regulatorQuickGO ontologyBLASTP
308976309158183hypothetical proteinBLASTP
309155309658504hypothetical proteinBLASTP
309655310023369hypothetical proteinBLASTP
31072331081896hypothetical protein
3108673123691503hypothetical proteinBLASTP
3128403148882049Threonyl-tRNA synthetase Threonine--tRNA ligaseQuickGO ontologyBLASTP
3159633172371275putative tungsten-containing aldehyde ferredoxin oxidoreductase cofactor modifying proteinQuickGO ontologyBLASTP
3172343184091176putative aminocarboxymuconate-semialdehyde decarboxylaseQuickGO ontologyBLASTP
318406319251846putative Phytanoyl-CoA dioxygenaseQuickGO ontologyBLASTP
3192483208161569putative F-S oxidoreductase putative methyltransferaseQuickGO ontologyBLASTP
3208103222311422putative carboxylaseQuickGO ontologyBLASTP
322224323027804putative s-adenosylmethionine transferaseQuickGO ontologyBLASTP