Pre_GI: BLASTP Hits

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Query: NC_013410:89811:96713 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 96713, End: 97396, Length: 684

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004578:5336773:539910353991035399777675Pseudomonas syringae pv. tomato str. DC3000, complete genomevon Willebrand factor type A domain protein2e-63242
NC_007494:27084:413974139742065669Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceconserved hypothetical protein containing Von Willebrand factor, type A domain9e-60229
NC_014752:98117:124735124735125394660Neisseria lactamica ST-640, complete genomehypothetical protein2e-42172
NC_015376:2010009:202167820216782022355678Burkholderia gladioli BSR3 chromosome chromosome 2, completevon Willebrand factor type A4e-42171
NC_014117:442616:473903473903474580678Burkholderia sp. CCGE1002 chromosome chromosome 1, completevon Willebrand factor type A8e-41166
NC_015573:1573621:158072515807251581414690Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomevon Willebrand factor type A2e-39162
NC_011884:1998559:200565220056522006416765Cyanothece sp. PCC 7425, complete genomevon Willebrand factor type A3e-37155
NC_011206:2447905:246285524628552463532678Acidithiobacillus ferrooxidans ATCC 53993, complete genomevon Willebrand factor type A1e-37155
NC_011761:2546081:256103125610312561708678Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completevon Willebrand factor type A domain-containing protein1e-37155
NC_013851:2317091:232706523270652327742678Allochromatium vinosum DSM 180 chromosome, complete genomevon Willebrand factor type A6e-37154
NC_015161:1556766:156946415694641570135672Deinococcus proteolyticus MRP chromosome, complete genomevon Willebrand factor type A2e-36152
NC_009925:2533547:255106725510672551729663Acaryochloris marina MBIC11017, complete genomevon Willebrand factor type A domain protein, putative2e-36152
NC_008312:3638104:365763836576383658300663Trichodesmium erythraeum IMS101, complete genomevon Willebrand factor, type A1e-35149
NC_015057:241103:241103241103241744642Acidobacterium sp. MP5ACTX9 plasmid pACIX901, complete sequencevon Willebrand factor type A1e-35149
NC_020126:2979959:299141729914172992088672Myxococcus stipitatus DSM 14675, complete genomehypothetical protein2e-34145
NC_014033:2410331:2429991242999124310371047Prevotella ruminicola 23 chromosome, complete genomeputative tellurium resistance protein2e-1789.4
NC_014033:2410331:243224524322452432883639Prevotella ruminicola 23 chromosome, complete genomeputative tellurium resistance protein4e-1685.1
NC_015656:1653450:165680016568001657543744Frankia symbiont of Datisca glomerata chromosome, complete genomehypothetical protein1e-1480.1
NC_017265:3821890:384108438410843842067984Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-1479.7
NC_017168:438785:459033459033460016984Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-1479.7
NC_008150:3529430:354862335486233549606984Yersinia pestis Antiqua, complete genomehypothetical protein2e-1479.7
NC_004088:3955933:397572239757223976705984Yersinia pestis KIM, complete genomehypothetical protein2e-1479.7
NC_010159:1101241:1121473112147311225131041Yersinia pestis Angola, complete genomeputative tellurium resistance protein2e-1479.3
NC_006155:4105542:4124580412458041256201041Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-1479.3
NC_010634:4045794:4064832406483240658721041Yersinia pseudotuberculosis PB1/+, complete genomevon Willebrand factor type A2e-1479.3
NC_010170:4463000:449229744922974493031735Bordetella petrii, complete genomehypothetical protein2e-1375.9
NC_010002:4572573:460170546017054602439735Delftia acidovorans SPH-1, complete genomevon Willebrand factor type A3e-1375.5
NC_009778:1717458:1726008172600817270481041Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-1375.1
NC_005810:3238391:323906532390653239703639Yersinia pestis biovar Microtus str. 91001, complete genomeputative tellurium resistance protein6e-1374.3
NC_004088:3955933:397366839736683974306639Yersinia pestis KIM, complete genomehypothetical protein6e-1374.3
NC_010634:4045794:406277840627784063416639Yersinia pseudotuberculosis PB1/+, complete genomevon Willebrand factor type A6e-1374.3
NC_010159:1101241:111941911194191120057639Yersinia pestis Angola, complete genomeputative tellurium resistance protein6e-1374.3
NC_003143:645559:646233646233646871639Yersinia pestis CO92, complete genomeputative tellurium resistance protein6e-1374.3
NC_006155:4105542:412252641225264123164639Yersinia pseudotuberculosis IP 32953, complete genomeputative tellurium resistance protein6e-1374.3
NC_008150:3529430:354656935465693547207639Yersinia pestis Antiqua, complete genomeputative tellurium resistance protein6e-1374.3
NC_009381:427515:428189428189428827639Yersinia pestis Pestoides F chromosome, complete genometellurium resistance protein6e-1374.3
NC_009708:588102:589416589416590054639Yersinia pseudotuberculosis IP 31758 chromosome, complete genometellurium resistance protein6e-1374.3
NC_014029:699078:699752699752700390639Yersinia pestis Z176003 chromosome, complete genomeputative tellurium resistance protein6e-1374.3
NC_017154:640578:641892641892642530639Yersinia pestis D106004 chromosome, complete genomeputative tellurium resistance protein6e-1374.3
NC_017160:643406:644080644080644718639Yersinia pestis D182038 chromosome, complete genomeputative tellurium resistance protein6e-1374.3
NC_017168:438785:456979456979457617639Yersinia pestis A1122 chromosome, complete genomeputative tellurium resistance protein6e-1374.3
NC_006625:144929:167687167687168325639Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequenceTerY28e-1373.9
NC_008760:27967:5353153531545831053Polaromonas naphthalenivorans CJ2 plasmid pPNAP04, completevon Willebrand factor, type A1e-1273.2
NC_009778:1717458:172713417271341727772639Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-1272.4
NC_017265:3821890:383903038390303839668639Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative tellurium resistance protein3e-1272
NC_008757:111292:129168129168129890723Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completevon Willebrand factor, type A5e-1271.2
NC_006625:144929:1665541665541675941041Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequenceTerY31e-1170.1
NC_010634:4045794:406402940640294064730702Yersinia pseudotuberculosis PB1/+, complete genomevon Willebrand factor type A1e-1169.7
NC_009708:588102:588102588102588740639Yersinia pseudotuberculosis IP 31758 chromosome, complete genometellurium resistance protein3e-1168.6
NC_006155:4105542:412377741237774124478702Yersinia pseudotuberculosis IP 32953, complete genomeputative TerY-like tellurite resistance protein.4e-1168.6
NC_010159:1101241:112070311207031121371669Yersinia pestis Angola, complete genomeputative tellurium resistance protein1e-1066.6
NC_005810:3238391:323775132377513238452702Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein2e-1066.2
NC_004088:3955933:397491939749193975620702Yersinia pestis KIM, complete genomehypothetical protein2e-1066.2
NC_008150:3529430:354782035478203548521702Yersinia pestis Antiqua, complete genomehypothetical protein2e-1066.2
NC_009381:427515:426875426875427576702Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-1066.2
NC_017168:438785:458293458293458931639Yersinia pestis A1122 chromosome, complete genomeputative tellurium resistance protein2e-1066.2
NC_017265:3821890:384034438403443840982639Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-1066.2
NC_013410:2691437:270688927068892707599711Fibrobacter succinogenes subsp. succinogenes S85 chromosome,von Willebrand factor type A6e-1064.3
NC_009778:1717458:172843617284361729029594Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-0962.4
NC_019940:3660754:3666464366646436675161053Thioflavicoccus mobilis 8321 chromosome, complete genomehypothetical protein4e-0961.6
NC_017154:640578:640578640578641195618Yersinia pestis D106004 chromosome, complete genomehypothetical protein1e-0860.1
NC_013510:1703464:171676117167611717447687Thermomonospora curvata DSM 43183, complete genomevon Willebrand factor type A1e-0860.1
NC_017378:986611:100392110039211004559639Helicobacter pylori Puno120 chromosome, complete genomephage/colicin/tellurite resistance cluster protein TerY2e-0859.7
NC_014033:2410331:243104524310452431680636Prevotella ruminicola 23 chromosome, complete genomeputative tellurium resistance protein2e-0859.3
NC_017379:996500:101383510138351014473639Helicobacter pylori Puno135 chromosome, complete genomephage/colicin/tellurite resistance cluster protein TerY5e-0857.8
NC_012973:967380:983229983229983873645Helicobacter pylori B38 chromosome, complete genomehypothetical protein2e-0756.2
NC_017362:992293:100551210055121006171660Helicobacter pylori Lithuania75 chromosome, complete genomehypothetical protein1e-0653.1