Pre_GI: BLASTP Hits

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Query: NC_013198:394000:464786 Lactobacillus rhamnosus GG, complete genome

Start: 464786, End: 465940, Length: 1155

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014554:337268:3562713562713574551185Lactobacillus plantarum subsp. plantarum ST-III chromosome,periplasmic nitrate reductase NapA1e-87323
NC_004567:343500:3638193638193650031185Lactobacillus plantarum WCFS1, complete genomeNa(+)/H(+) antiporter1e-87323
NC_020207:1795993:1817963181796318191141152Enterococcus faecium NRRL B-2354, complete genomeNa, H antiporter4e-82305
NC_008525:270310:2897552897552909151161Pediococcus pentosaceus ATCC 25745, complete genomeKef-type K+ transport system, membrane component1e-78293
NC_008497:447427:4647184647184658991182Lactobacillus brevis ATCC 367, complete genomeKef-type K+ transport system, membrane component3e-78292
NC_016605:50695:7339073390745621173Pediococcus claussenii ATCC BAA-344 chromosome, complete genomeproton antiporter-2 family protein2e-68259
NC_012984:3077004:3078509307850930797051197Lactobacillus plantarum JDM1, complete genomeNa(+)/H(+) antiporter7e-56218
NC_003909:927955:9340869340869352131128Bacillus cereus ATCC 10987, complete genomegermination protein gerN1e-52207
NC_019897:3669888:3694375369437536955501176Thermobacillus composti KWC4 chromosome, complete genomeKef-type K+ transport system membrane protein1e-51203
NC_016051:1681076:1704501170450117056431143Thermococcus sp. AM4 chromosome, complete genomeNa+/H+ antiporter8e-38158
NC_012804:271459:2865452865452876871143Thermococcus gammatolerans EJ3, complete genomeNa+/H+ antiporter, napA type (napA)2e-36153
NC_015499:352934:3743163743163754791164Thermodesulfobium narugense DSM 14796 chromosome, complete genomesodium/hydrogen exchanger9e-36151
NC_015865:1260461:1279211127921112803531143Thermococcus sp. 4557 chromosome, complete genomeNapA-type sodium/hydrogen antiporter3e-35149
NC_015680:711753:7208047208047219461143Pyrococcus yayanosii CH1 chromosome, complete genomeNa+/H+ antiporter4e-32139
NC_012804:271459:2876982876982888221125Thermococcus gammatolerans EJ3, complete genomeNa+/H+ antiporter, napA type (napA)3e-27123
NC_015865:1260461:1278085127808512792091125Thermococcus sp. 4557 chromosome, complete genomeNa+/H+ antiporter7e-23108
NC_000868:133451:1334511334511345781128Pyrococcus abyssi GE5, complete genomeNa+/H+ antiporter6e-22105
NC_015759:1117122:112538511253851126347963Weissella koreensis KACC 15510 chromosome, complete genomeKef-type K+ transport system, membrane component7e-22105
NC_007955:1779222:1779222177922217803941173Methanococcoides burtonii DSM 6242, complete genomesodium/hydrogen exchanger2e-20100
NC_015152:2887414:2902747290274729043871641Spirochaeta sp. Buddy chromosome, complete genomesodium/hydrogen exchanger1e-1997.4
NC_019962:2129393:2150515215051521517531239Natrinema pellirubrum DSM 15624, complete genomeKef-type K+ transport system, membrane component3e-1996.7
NC_013926:321122:3253593253593265551197Aciduliprofundum boonei T469 chromosome, complete genomesodium/hydrogen exchanger3e-1996.3
NC_013156:21781:4296342963441261164Methanocaldococcus fervens AG86, complete genomesodium/hydrogen exchanger1e-1894.4
NC_019942:1078837:1109498110949811107181221Aciduliprofundum sp. MAR08-339, complete genomeKef-type K+ transport system, membrane component7e-1892
NC_014541:3927500:3945581394558139468461266Ferrimonas balearica DSM 9799 chromosome, complete genometransporter, CPA2 family3e-1686.3
NC_009634:53555:5501055010561761167Methanococcus vannielii SB chromosome, complete genomesodium/hydrogen exchanger6e-1582
NC_014537:603564:6150026150026162011200Vulcanisaeta distributa DSM 14429 chromosome, complete genomesodium/hydrogen exchanger3e-1479.7
NC_009975:1682000:1683608168360816847741167Methanococcus maripaludis C6, complete genomesodium/hydrogen exchanger4e-1479.3
NC_017098:875378:8774938774938795742082Spirochaeta africana DSM 8902 chromosome, complete genomeKef-type K+ transport system membrane protein5e-1479
NC_003413:1107965:1110664111066411118451182Pyrococcus furiosus DSM 3638, complete genomeputative Na+/H+ antiporter6e-1479
NC_008255:908881:9230869230869253112226Cytophaga hutchinsonii ATCC 33406, complete genomeNa+/H+ antiporter2e-1377
NC_008942:1198000:1213839121383912158872049Methanocorpusculum labreanum Z, complete genomehypothetical protein3e-1376.6
NC_015151:1427965:1438882143888214400811200Vulcanisaeta moutnovskia 768-28 chromosome, complete genomesodium/hydrogen exchanger2e-1376.6
NC_014323:3976351:3977123397712339788861764Herbaspirillum seropedicae SmR1 chromosome, complete genomeKef-type K+ transport system, membrane component protein5e-1375.9
NC_013199:1966334:1987394198739419892231830Lactobacillus rhamnosus Lc 705, complete genomeKef-type K transport system, membrane component7e-1375.1
NC_005791:837505:8549988549988561641167Methanococcus maripaludis S2, complete genomeNa+/H+ exchanger1e-1274.3
NC_019964:861000:8754668754668777392274Halovivax ruber XH-70, complete genomeKef-type K+ transport system, membrane component2e-1274.3
NC_009615:2039964:2042081204208120443692289Parabacteroides distasonis ATCC 8503 chromosome, complete genomecation/H+ antiporter2e-1273.9
NC_009033:653462:6664816664816677731293Staphylothermus marinus F1, complete genomesodium/hydrogen exchanger3e-1273.2
NC_014253:1818000:1819896181989618211011206Methanohalobium evestigatum Z-7303 chromosome, complete genomesodium/hydrogen exchanger3e-1273.2
NC_015566:4547702:4560108456010845613521245Serratia sp. AS12 chromosome, complete genomesodium/hydrogen exchanger1e-1171.2
NC_015847:909938:9271419271419283041164Methanococcus maripaludis XI chromosome, complete genomeNa+/H+ exchanger2e-1170.1
NC_009662:1285826:1290922129092212922741353Nitratiruptor sp. SB155-2, complete genomeNa+:H+ antiporter5e-1168.9
NC_015732:2057895:2076340207634020784692130Spirochaeta caldaria DSM 7334 chromosome, complete genomesodium/hydrogen exchanger6e-1168.9
NC_011565:423000:4370124370124392762265Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,putative kef-type K+(efflux) /H+ antiporter8e-1168.6
NC_007516:124486:1559901559901573661377Synechococcus sp. CC9605, complete genomeputative Na+/H+ antiporter, CPA2 family1e-1068.2
NC_000868:1168819:1172380117238011735521173Pyrococcus abyssi GE5, complete genomeNa+/H+ antiporter1e-1068.2
NC_007492:3954345:3991840399184039936481809Pseudomonas fluorescens PfO-1, complete genomePotassium efflux system protein1e-1067.8
NC_003888:3602753:3622590362259036238041215Streptomyces coelicolor A3(2), complete genomeintegral membrane efflux protein2e-1067.4
NC_015731:2460248:2492230249223024942121983Nitrosomonas sp. Is79A3 chromosome, complete genomepotassium efflux system protein2e-1067
NC_007955:1523500:1536106153610615380161911Methanococcoides burtonii DSM 6242, complete genomesodium/hydrogen exchanger2e-1067
NC_009464:225400:2394542394542406621209Uncultured methanogenic archaeon RC-I, complete genomeputative Na+/H+ antiporter2e-1067
NC_015474:1490668:1509599150959915107801182Pyrococcus sp. NA2 chromosome, complete genomeNa+/H+ antiporter3e-1066.6
NC_007777:1170406:1184253118425311856111359Frankia sp. CcI3, complete genomesodium/hydrogen exchanger6e-1065.5
NC_015500:484984:5087925087925109722181Treponema brennaborense DSM 12168 chromosome, complete genomesodium/hydrogen exchanger8e-1065.1
NC_014817:1063173:1080268108026810816291362Asticcacaulis excentricus CB 48 chromosome 2, complete sequencesodium/hydrogen exchanger9e-1065.1
NC_008609:3921113:3924156392415639258111656Pelobacter propionicus DSM 2379, complete genomesodium/hydrogen exchanger1e-0964.7
NC_015259:673662:6994446994447006221179Polymorphum gilvum SL003B-26A1 chromosome, complete genomeSodium/hydrogen exchanger2e-0963.9
NC_016776:3973428:3975388397538839776522265Bacteroides fragilis 638R, complete genomeputative K+ transport related membrane protein5e-0962.8
NC_003228:3934770:3936730393673039389942265Bacteroides fragilis NCTC 9343, complete genomeputative K+ transport related membrane protein5e-0962.8
NC_006347:4031000:4032976403297640352402265Bacteroides fragilis YCH46, complete genomeputative Na+/H+ antiporter6e-0962.4
NC_007908:4677856:4704535470453547065051971Rhodoferax ferrireducens T118, complete genomesodium/hydrogen exchanger7e-0962
NC_016051:1429800:1430044143004414312311188Thermococcus sp. AM4 chromosome, complete genomeNapA-4 Na+/H+ antiporter8e-0961.6
NC_007508:4765751:4768789476878947706061818Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeglutathione-regulated potassium-efflux protein C1e-0860.8
NC_004578:4781326:4798755479875548005781824Pseudomonas syringae pv. tomato str. DC3000, complete genomeglutathione-regulated potassium-efflux system protein1e-0860.8
NC_000961:828416:8436788436788448501173Pyrococcus horikoshii OT3, complete genomeNa(+)/H(+) antiporter2e-0860.5
NC_009921:2605721:2626404262640426277861383Frankia sp. EAN1pec, complete genomesodium/hydrogen exchanger2e-0860.5
NC_012918:3203136:3211097321109732130101914Geobacter sp. M21 chromosome, complete genomepotassium efflux system protein7e-0858.5
NC_011884:3393500:3410562341056234128142253Cyanothece sp. PCC 7425, complete genomesodium/hydrogen exchanger2e-0757.4
NC_003910:3448983:3464423346442334662551833Colwellia psychrerythraea 34H, complete genomeglutathione-regulated potassium-efflux system protein KefC2e-0757
NC_018876:2403892:2430658243065824326822025Methanolobus psychrophilus R15 chromosome, complete genomesodium/hydrogen exchanger3e-0756.6
NC_008554:4781500:4796449479644947984071959Syntrophobacter fumaroxidans MPOB, complete genomesodium/hydrogen exchanger4e-0756.2
NC_015697:116000:1179191179191197781860Lactobacillus reuteri SD2112 chromosome, complete genomeCPA2 family monovalent cation:proton (H+) antiporter-25e-0755.8
NC_008820:2268900:2288180228818022895531374Prochlorococcus marinus str. MIT 9303, complete genomeputative Na+/H+ antiporter, CPA2 family protein6e-0755.5
NC_007413:5742406:5742406574240657445442139Anabaena variabilis ATCC 29413, complete genomeSodium/hydrogen exchanger6e-0755.5
NC_004663:4692339:4714360471436047164952136Bacteroides thetaiotaomicron VPI-5482, complete genomeNa+/H+ anti-porter8e-0755.1
NC_007645:6955479:6964607696460769663221716Hahella chejuensis KCTC 2396, complete genomeKef-type K+ transport system, predicted NAD-binding component1e-0654.7
NC_011529:1554500:1577028157702815782031176Thermococcus onnurineus NA1, complete genomeNapA-type sodium/hydrogen antiporter1e-0654.3
NC_003552:3862275:3862878386287838648631986Methanosarcina acetivorans C2A, complete genomeglutathione-regulated potassium-efflux system protein2e-0653.9
NC_014210:397922:4163754163754175801206Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,sodium/hydrogen exchanger4e-0653.1
NC_012804:2017531:2021180202118020223671188Thermococcus gammatolerans EJ3, complete genomeNa+/H+ antiporter (napA)6e-0652.4
NC_017265:3240379:3244107324410732457981692Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative transporter with NAD(P)-binding Rossmann-fold domain5e-0652.4
NC_010159:1288000:1314919131491913166071689Yersinia pestis Angola, complete genometransporter, monovalent cation:proton antiporter-2 (CPA2) family5e-0652.4
NC_017160:3426486:3429872342987234315601689Yersinia pestis D182038 chromosome, complete genomepotassium antiporter5e-0652.4
NC_016051:1005188:1018908101890810202391332Thermococcus sp. AM4 chromosome, complete genomeNapA-type Na+/H+ antiporter5e-0652.4
NC_013202:771161:7711617711617723721212Halomicrobium mukohataei DSM 12286, complete genomesodium/hydrogen exchanger8e-0652
NC_006155:1191307:1220077122007712217681692Yersinia pseudotuberculosis IP 32953, complete genomeCPA2 family K+/H+ antiporter, CAMP induced rosB subunit7e-0652
NC_008149:1122693:1152734115273411544251692Yersinia pestis Nepal516, complete genomepotassium antiporter7e-0652
NC_005810:872672:9013939013939030841692Yersinia pestis biovar Microtus str. 91001, complete genomeputative cation:proton antiport protein7e-0652
NC_008150:2878450:2882179288217928838701692Yersinia pestis Antiqua, complete genomeputative potassium antiporter7e-0652
NC_010634:1175404:1202620120262012043111692Yersinia pseudotuberculosis PB1/+, complete genomepotassium efflux system protein7e-0652
NC_004088:1196875:1223560122356012252511692Yersinia pestis KIM, complete genomepotassium efflux protein7e-0652
NC_003143:3446740:3450514345051434522051692Yersinia pestis CO92, complete genomeputative potassium antiporter7e-0652
NC_010465:3465351:3469447346944734711381692Yersinia pseudotuberculosis YPIII, complete genomepotassium efflux system protein7e-0652
NC_009381:3094939:3098667309866731003581692Yersinia pestis Pestoides F chromosome, complete genomeputative cation:proton antiport protein7e-0652
NC_014029:3501500:3504918350491835066091692Yersinia pestis Z176003 chromosome, complete genomeputative potassium antiporter7e-0652
NC_017154:3444497:3447883344788334495741692Yersinia pestis D106004 chromosome, complete genomeputative potassium antiporter7e-0652
NC_017098:1278712:1281185128118512836742490Spirochaeta africana DSM 8902 chromosome, complete genomeKef-type K+ transport system membrane protein7e-0652
NC_009708:3411153:3414538341453834162291692Yersinia pseudotuberculosis IP 31758 chromosome, complete genomecation:proton antiport protein6e-0652
NC_014248:2654471:2657399265739926596422244Nostoc azollae 0708 chromosome, complete genomesodium/hydrogen exchanger8e-0651.6
NC_009668:1591290:1591290159129015930831794Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencepotassium efflux system protein9e-0651.6