Pre_GI Gene

Some Help

Host: NC_008525 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008525:270310 Pediococcus pentosaceus ATCC 25745, complete genome

Host Lineage: Pediococcus pentosaceus; Pediococcus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Use in fermentation of food products. A distinctive characteristic of pediococci is their ability to form tetrads via cell division in two perpendicular directions in a single plane. Like other lactic acid bacteria, species of Pediococcus are acid tolerant, cannot synthesize porphyrins, and possess a strictly fermentative (homofermentative) facultatively anaerobic metabolism with lactic acid as the major metabolic end product. They also occur in such food products as cured meat, raw sausages, and marinated fish, and are are used for biotechnological processing and preservation of foods. This bacterium can be isolated from a variety of plant materials and bacterial-ripened cheeses. This organism is used as an acid producing starter culture in the fermentation of some sausages, cucumbers, green beans, soy milk, and silage. Some strains have been reported to contain several (3-5) resident plasmids that render the bacterium capable of fermenting some sugars (raffinose, melibiose, and sucrose), as well as producing bacteriocins.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2703102714011092hypothetical proteinBLASTP
2716672729771311cellobiose-specific PTS system IIC componentQuickGO ontologyBLASTP
273101273559459hypothetical protein
273665274303639Saccharopine dehydrogenase related proteinQuickGO ontologyBLASTP
2744472758441398dipeptidaseQuickGO ontologyBLASTP
2761502774031254Tyrosyl-tRNA synthetaseQuickGO ontologyBLASTP
277878279458158116S ribosomal RNAQuickGO ontologyBLASTP
279687282609292323S ribosomal RNAQuickGO ontologyBLASTP
2827032828191175S ribosomal RNAQuickGO ontologyBLASTP
28293628300974tRNA-ThrQuickGO ontology
2831742845381365Purine-cytosine permease related proteinQuickGO ontologyBLASTP
2845282857601233DihydroorotaseQuickGO ontologyBLASTP
2858552873841530ABC-type prolineglycine betaine transport system permease and substrate binding proteinQuickGO ontologyBLASTP
287384288349966ABC-type prolineglycine betaine transport system ATPase componentQuickGO ontologyBLASTP
2883642896981335Pyruvate2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase E3 component related enzymeQuickGO ontologyBLASTP
2897552909151161Kef-type K transport system membrane componentQuickGO ontologyBLASTP
2910552944803426Pyruvate carboxylaseQuickGO ontologyBLASTP