Pre_GI Gene

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Host: NC_007492 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007492:3954345 Pseudomonas fluorescens PfO-1, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
39535093954348840hypothetical proteinBLASTP
395434539555651221Radical SAMQuickGO ontologyBLASTP
39558283956571744Short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
39565683957329762Transcriptional Regulator ArsR familyQuickGO ontologyBLASTP
395740939585091101putative cytochrome p450 oxidoreductaseQuickGO ontologyBLASTP
39585063959453948Cation efflux proteinQuickGO ontologyBLASTP
39594503959725276Protein of unknown function DUF156QuickGO ontologyBLASTP
39599083960219312hypothetical proteinBLASTP
39607313961102372hypothetical proteinBLASTP
39611123961393282hypothetical proteinBLASTP
39615133961752240hypothetical proteinBLASTP
39617533962088336hypothetical proteinBLASTP
396238439639821599RecombinaseQuickGO ontologyBLASTP
39644843965452969hypothetical proteinBLASTP
39655193966343825hypothetical protein
39663533966772420hypothetical protein
39667883967216429hypothetical protein
39672383967687450hypothetical proteinBLASTP
39685323969269738hypothetical proteinBLASTP
397004239710881047hypothetical protein
39711263971494369hypothetical protein
39722043972509306hypothetical protein
39728063973078273hypothetical protein
39731173973458342hypothetical protein
39734583973994537hypothetical protein
39741673974418252hypothetical protein
39749663975292327hypothetical protein
39753663975800435hypothetical protein
397580639781782373hypothetical proteinBLASTP
39781783978537360hypothetical protein
39787393979488750hypothetical proteinBLASTP
39796203980447828hypothetical protein
39811163981862747Resolvase-likeQuickGO ontologyBLASTP
39820603982626567hypothetical protein
39826413983312672hypothetical proteinBLASTP
39834393983810372hypothetical protein
398388839852461359hypothetical protein
39853053985754450hypothetical protein
39861703986460291hypothetical protein
39865443986747204Peptidylprolyl isomerase FKBP-typeQuickGO ontologyBLASTP
398688939879651077Putative diguanylate cyclase GGDEF domain with PASPAC sensor domainQuickGO ontologyBLASTP
39879743988282309hypothetical protein
398869939899911293Citrate-proton symportQuickGO ontologyBLASTP
39900023990772771extracellular solute-binding protein family 1QuickGO ontologyBLASTP
39907623991676915Transcriptional Regulator LysR familyQuickGO ontologyBLASTP
399184039936481809Potassium efflux system proteinQuickGO ontologyBLASTP
399369439949531260FAD dependent oxidoreductaseQuickGO ontologyBLASTP
399494639963551410BFD-like 2Fe-2S-binding regionQuickGO ontologyBLASTP
39963523996678327FerredoxinQuickGO ontologyBLASTP
39970743998012939hypothetical proteinBLASTP