Pre_GI: BLASTP Hits

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Query: NC_013198:1538792:1556715 Lactobacillus rhamnosus GG, complete genome

Start: 1556715, End: 1557119, Length: 405

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017353:887581:896418896418896834417Staphylococcus lugdunensis N920143, complete genomeSSB family protein2e-1684.3
NC_004669:24672:272692726927727459Enterococcus faecalis V583 plasmid pTEF1, complete sequencesingle-strand binding protein8e-1682.4
NC_010674:2856997:286149828614982861920423Clostridium botulinum B str. Eklund 17B, complete genomesingle-strand binding protein6e-1579.7
NC_009698:3706154:374374837437483744194447Clostridium botulinum A str. Hall chromosome, complete genomesingle-strand binding protein1e-1478.6
NC_010516:3903867:394146139414613941907447Clostridium botulinum B1 str. Okra, complete genomesingle-strand binding protein1e-1478.6
NC_009495:3832500:387010438701043870550447Clostridium botulinum A str. ATCC 3502 chromosome, complete genomesingle-strand binding protein1e-1478.6
NC_009699:3940984:397857939785793979025447Clostridium botulinum F str. Langeland chromosome, complete genomesingle-strand binding protein1e-1478.6
NC_017297:3939328:397627539762753976721447Clostridium botulinum F str. 230613 chromosome, complete genomesingle-strand binding protein1e-1478.6
NC_014389:353000:353051353051353494444Butyrivibrio proteoclasticus B316 plasmid pCY360, completesingle stranded DNA binding protein Ssb35e-1476.3
NC_021175:155152:157678157678158073396Streptococcus oligofermentans AS 1.3089, complete genomesingle-stranded DNA-binding protein2e-1374.3
NC_017351:2074000:210190421019042102374471Staphylococcus aureus subsp. aureus 11819-97 chromosome, completesingle-stranded DNA-binding protein ssb5e-1373.2
NC_017341:2127815:214637721463772146847471Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,putative single-strand DNA-binding protein5e-1373.2
NC_014393:4323368:433292643329264333360435Clostridium cellulovorans 743B chromosome, complete genomesingle-strand binding protein5e-1373.2
NC_017338:2034698:206817720681772068647471Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeputative single-strand DNA-binding protein4e-1373.2
NC_013450:854790:863279863279863704426Staphylococcus aureus subsp. aureus ED98, complete genomesingle-stranded DNA binding protein6e-1372.8
NC_002758:2101137:211404721140472114517471Staphylococcus aureus subsp. aureus Mu50, complete genomesingle-strand DNA-binding protein7e-1372.8
NC_015949:1957185:196061519606151961103489Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomesingle-strand binding protein9e-1372.4
NC_012781:3087467:310237131023713102814444Eubacterium rectale ATCC 33656, complete genomesingle-strand binding protein8e-1372.4
NC_009706:3882500:394900539490053949445441Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein8e-1372.4
NC_011837:3814000:388050838805083880948441Clostridium kluyveri NBRC 12016, complete genomehypothetical protein8e-1372.4
NC_009487:2148316:215914021591402159610471Staphylococcus aureus subsp. aureus JH9 chromosome, completesingle-strand binding protein7e-1372.4
NC_009487:362475:371503371503371973471Staphylococcus aureus subsp. aureus JH9 chromosome, completesingle-strand binding protein7e-1372.4
NC_009632:2148767:215901421590142159484471Staphylococcus aureus subsp. aureus JH1 chromosome, completesingle-strand binding protein7e-1372.4
NC_009632:361229:371573371573372043471Staphylococcus aureus subsp. aureus JH1 chromosome, completesingle-strand binding protein7e-1372.4
NC_004606:623853:633367633367633786420Streptococcus pyogenes SSI-1, complete genomeputative single strand binding protein9e-1372
NC_007622:1842000:187891818789181879343426Staphylococcus aureus RF122, complete genomesingle strand DNA binding protein9e-1372
NC_007296:1230614:126041212604121260831420Streptococcus pyogenes MGAS6180, complete genomephage single-strand DNA binding protein9e-1372
NC_012891:1573435:159664615966461597065420Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,putative single strand binding protein1e-1271.6
NC_011660:2924397:293862029386202939099480Listeria monocytogenes HCC23 chromosome, complete genomessDNA-binding protein1e-1271.6
NC_021182:4367736:437877143787714379238468Clostridium pasteurianum BC1, complete genomesingle stranded DNA-binding protein2e-1271.2
NC_002758:918827:925247925247925672426Staphylococcus aureus subsp. aureus Mu50, complete genomesingle strand DNA binding protein2e-1271.2
NC_009782:920272:926692926692927117426Staphylococcus aureus subsp. aureus Mu3, complete genomesingle strand DNA binding protein2e-1271.2
NC_010079:2102856:211619921161992116669471Staphylococcus aureus subsp. aureus USA300_TCH1516, completesingle-stranded DNA-binding protein2e-1271.2
NC_010163:171148:186077186077186523447Acholeplasma laidlawii PG-8A chromosome, complete genomesingle-strand DNA-binding protein2e-1271.2
NC_017337:1107930:111565511156551116080426Staphylococcus aureus subsp. aureus ED133 chromosome, completessDNA-binding protein3e-1270.9
NC_016928:1538901:156573315657331566176444Staphylococcus aureus subsp. aureus M013 chromosome, completessDNA-binding protein4e-1270.1
NC_017337:321155:328806328806329225420Staphylococcus aureus subsp. aureus ED133 chromosome, completeSingle-stranded DNA-binding protein, phage associated5e-1269.7
NC_014498:1983740:202026820202682020684417Streptococcus pneumoniae 670-6B chromosome, complete genomesingle-strand binding protein family1e-1168.9
NC_013766:679906:691505691505691984480Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein1e-1168.6
NC_013171:896802:904410904410904874465Anaerococcus prevotii DSM 20548, complete genomesingle-strand binding protein1e-1168.6
NC_003212:2413824:243106524310652431547483Listeria innocua Clip11262, complete genomehypothetical protein1e-1168.6
NC_004116:560893:568399568399568815417Streptococcus agalactiae 2603V/R, complete genomeprophage LambdaSa1, single-strand binding protein1e-1168.2
NC_002951:351029:363651363651364070420Staphylococcus aureus subsp. aureus COL, complete genomeprophage L54a, single-stranded DNA binding protein2e-1168.2
NC_017351:643674:653051653051653521471Staphylococcus aureus subsp. aureus 11819-97 chromosome, completesingle-stranded DNA-binding protein ssb2e-1167.8
NC_007168:2631535:263153526315352632047513Staphylococcus haemolyticus JCSC1435, complete genomesingle-strand DNA-binding protein of phage phi PVL3e-1167.4
NC_009487:921884:928459928459928887429Staphylococcus aureus subsp. aureus JH9 chromosome, completesingle-strand binding protein3e-1167
NC_009632:921759:928334928334928762429Staphylococcus aureus subsp. aureus JH1 chromosome, completesingle-strand binding protein3e-1167
NC_016052:1839763:185096818509681851438471Tetragenococcus halophilus NBRC 12172, complete genomesingle-stranded DNA-binding protein3e-1167
NC_017342:1147517:116538511653851165780396Staphylococcus aureus subsp. aureus TCH60 chromosome, completessDNA-binding protein6e-1166.2
NC_007795:2163706:216370621637062164101396Staphylococcus aureus subsp. aureus NCTC 8325, complete genomebacteriophage L54a, single-stranded DNA binding protein6e-1166.2
NC_002758:2227874:222787422278742228269396Staphylococcus aureus subsp. aureus Mu50, complete genomesimilar to single strand DNA binding protein6e-1166.2
NC_009487:2257889:225788922578892258284396Staphylococcus aureus subsp. aureus JH9 chromosome, completesingle-strand binding protein6e-1166.2
NC_009632:2257764:225776422577642258159396Staphylococcus aureus subsp. aureus JH1 chromosome, completesingle-strand binding protein6e-1166.2
NC_017337:2186449:218782021878202188215396Staphylococcus aureus subsp. aureus ED133 chromosome, completessDNA-binding protein6e-1166.2
NC_017351:2199644:219964421996442200039396Staphylococcus aureus subsp. aureus 11819-97 chromosome, completesingle-stranded DNA-binding family protein6e-1166.2
NC_003212:57061:903339033390812480Listeria innocua Clip11262, complete genomehypothetical protein5e-1166.2
NC_007168:1839382:184723718472371847665429Staphylococcus haemolyticus JCSC1435, complete genomesingle strand DNA binding protein5e-1166.2
NC_007297:1001981:101159910115991012024426Streptococcus pyogenes MGAS5005, complete genomephage single-strand DNA binding protein7e-1165.9
NC_004116:1827351:185473218547321855148417Streptococcus agalactiae 2603V/R, complete genomeprophage LambdaSa2, single-strand binding protein7e-1165.9
NC_011375:1482324:149319614931961493621426Streptococcus pyogenes NZ131 chromosome, complete genomeSingle-strand binding protein 31e-1065.5
NC_009437:1481064:150397115039711504453483Caldicellulosiruptor saccharolyticus DSM 8903, complete genomesingle-strand binding protein1e-1065.5
NC_017068:1327025:135303113530311353408378Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative single-stranded DNA-binding protein9e-1165.5
NC_007907:2534462:254701425470142547403390Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-1065.1
NC_003923:2178000:217808721780872178482396Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein2e-1064.7
NC_003210:2380419:238872923887292389211483Listeria monocytogenes EGD-e, complete genomehypothetical protein2e-1064.7
NC_013411:3314799:335068733506873351046360Geobacillus sp. Y412MC61, complete genomesingle-strand binding protein1e-1064.7
NC_020210:3246839:326250832625083262867360Geobacillus sp. GHH01, complete genomesingle-stranded DNA-binding protein1e-1064.7
NC_014915:3320768:335665633566563357015360Geobacillus sp. Y412MC52 chromosome, complete genomesingle-strand binding protein1e-1064.7
NC_014206:3355156:337513233751323375491360Geobacillus sp. C56-T3 chromosome, complete genomesingle-strand binding protein1e-1064.7
NC_008533:1380406:138237213823721382842471Streptococcus pneumoniae D39, complete genomesingle-strand binding protein2e-1064.3
NC_012466:1367099:136906513690651369535471Streptococcus pneumoniae JJA, complete genomesingle-stranded DNA-binding protein (SSB) (Helix-destabilizingprotein)2e-1064.3
NC_012469:1403412:140537814053781405848471Streptococcus pneumoniae Taiwan19F-14, complete genomesingle-stranded DNA-binding protein (SSB) (Helix-destabilizingprotein)2e-1064.3
NC_003098:1372875:137484113748411375311471Streptococcus pneumoniae R6, complete genomesingle-strand DNA-binding protein2e-1064.3
NC_011900:1451545:145720114572011457671471Streptococcus pneumoniae ATCC 700669, complete genomesingle-stranded DNA-binding protein2e-1064.3
NC_012468:1453763:145572914557291456199471Streptococcus pneumoniae 70585, complete genomesingle-stranded DNA-binding protein2e-1064.3
NC_014925:578759:590632590632591069438Staphylococcus pseudintermedius HKU10-03 chromosome, completeSingle-stranded DNA-binding protein2e-1064.3
NC_004722:5381208:539825953982595398771513Bacillus cereus ATCC 14579, complete genomesingle-strand DNA-binding protein3e-1063.9
NC_017200:5325977:534207653420765342588513Bacillus thuringiensis serovar finitimus YBT-020 chromosome,single-stranded DNA-binding protein3e-1063.9
NC_014335:5165211:518217051821705182691522Bacillus cereus biovar anthracis str. CI chromosome, completesingle-strand DNA-binding protein3e-1063.9
NC_005945:5202176:521524052152405215761522Bacillus anthracis str. Sterne, complete genomesingle-strand DNA-binding protein3e-1063.9
NC_005957:5203915:522425952242595224780522Bacillus thuringiensis serovar konkukian str. 97-27, completesingle-strand DNA-binding protein3e-1063.9
NC_011658:5239509:525560752556075256128522Bacillus cereus AH187 chromosome, complete genomesingle-stranded DNA-binding protein3e-1063.9
NC_012659:5200831:521389552138955214416522Bacillus anthracis str. A0248, complete genomesingle-stranded DNA-binding protein3e-1063.9
NC_012121:474144:481256481256481687432Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative single strand DNA binding protein,phage associated3e-1063.9
NC_012472:5239944:525608752560875256617531Bacillus cereus 03BB102, complete genomesingle-stranded DNA-binding protein3e-1063.9
NC_007530:5197854:521399552139955214513519Bacillus anthracis str. 'Ames Ancestor', complete genomesingle-strand DNA-binding protein3e-1063.5
NC_003997:5200805:521386952138695214387519Bacillus anthracis str. Ames, complete genomesingle-strand DNA-binding protein3e-1063.5
NC_006274:5267585:528749152874915288009519Bacillus cereus E33L, complete genomesingle-strand DNA-binding protein3e-1063.5
NC_016771:5191937:520803452080345208552519Bacillus cereus NC7401, complete genomesingle-stranded DNA-binding protein3e-1063.5
NC_016779:5189139:520948252094825210000519Bacillus cereus F837/76 chromosome, complete genomessDNA-binding protein3e-1063.5
NC_003485:296140:305711305711306103393Streptococcus pyogenes MGAS8232, complete genomeputative single strand binding protein4e-1063.2
NC_015437:1494777:150684615068461507247402Selenomonas sputigena ATCC 35185 chromosome, complete genomesingle-strand binding protein8e-1062.4
NC_002662:1042546:104316910431691043621453Lactococcus lactis subsp. lactis Il1403, complete genomesingle strand binding protein2e-0961.6
NC_012471:781063:792221792221792613393Streptococcus equi subsp. equi 4047, complete genomesingle-strand binding protein1e-0961.6
NC_009328:3504454:353459835345983535092495Geobacillus thermodenitrificans NG80-2 chromosome, complete genomessDNA-binding protein1e-0961.6
NC_012778:2015409:201990120199012020365465Eubacterium eligens ATCC 27750, complete genomesingle-strand DNA-binding protein2e-0961.2
NC_009674:1707944:171835017183501718715366Bacillus cytotoxicus NVH 391-98 chromosome, complete genomesingle-stranded DNA-binding protein3e-0960.5
NC_018704:176088:196707196707197162456Amphibacillus xylanus NBRC 15112, complete genomesingle-stranded DNA-binding protein4e-0960.1
NC_014363:8228:282202822028690471Olsenella uli DSM 7084 chromosome, complete genomesingle-strand binding protein7e-0959.3
NC_009714:113975:122323122323122739417Campylobacter hominis ATCC BAA-381, complete genomesingle-strand binding protein family1e-0858.9
NC_013406:7092510:709787870978787098372495Paenibacillus sp. Y412MC10 chromosome, complete genomesingle-strand-binding protein1e-0858.5
NC_013198:1095591:111393511139351114420486Lactobacillus rhamnosus GG, complete genomesingle strand DNA binding protein (SSB)1e-0858.5
NC_017191:3901914:392264839226483923166519Bacillus amyloliquefaciens XH7 chromosome, complete genomesingle-strand DNA-binding protein (Helix-destabilizing protein)1e-0858.2
NC_017188:3900951:392095639209563921474519Bacillus amyloliquefaciens TA208 chromosome, complete genomesingle-strand DNA-binding protein1e-0858.2
NC_017068:1401352:141793014179301418307378Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative single-stranded DNA-binding protein1e-0858.2
NC_011047:443475:478616478616478924309Candidatus Phytoplasma mali, complete genomeSingle-stranded DNA binding protein2e-0858.2
NC_015519:1081539:109212310921231092512390Tepidanaerobacter sp. Re1 chromosome, complete genomesingle-strand binding protein2e-0858.2
NC_015690:8645500:864776986477698648254486Paenibacillus mucilaginosus KNP414 chromosome, complete genomesingle-strand binding protein2e-0857.8
NC_016935:8716704:872299287229928723477486Paenibacillus mucilaginosus 3016 chromosome, complete genomesingle-strand binding protein2e-0857.8
NC_013199:845000:852765852765853250486Lactobacillus rhamnosus Lc 705, complete genomesingle-stranded DNA-binding protein (SSB) (Helix-destabilizing protein)3e-0857.4
NC_020410:3868573:389370038937003894218519Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completesingle-strand DNA-binding protein3e-0857.4
NC_009725:3878862:390199639019963902514519Bacillus amyloliquefaciens FZB42, complete genomeSsb3e-0857.4
NC_019842:3921424:394476939447693945287519Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,single-strand DNA-binding protein3e-0857.4
NC_012984:1027898:103374610337461034207462Lactobacillus plantarum JDM1, complete genomesingle-strand binding protein4e-0857
NC_015672:203139:207560207560207994435Flexistipes sinusarabici DSM 4947 chromosome, complete genomesingle-strand binding protein6e-0856.2
NC_010682:1624985:164143416414341641967534Ralstonia pickettii 12J chromosome 1, complete sequencesingle-strand binding protein9e-0855.8
NC_015519:2739347:274058527405852741004420Tepidanaerobacter sp. Re1 chromosome, complete genomesingle-strand binding protein8e-0855.8
NC_014311:3076519:311849631184963119044549Ralstonia solanacearum PSI07 chromosome, complete genomessDNA-binding protein, controls activity of RecBCD nuclease8e-0855.8
NC_016510:4343:864186419063423Flavobacterium columnare ATCC 49512 chromosome, complete genomesingle-strand DNA-binding protein Ssb9e-0855.5
NC_017294:71494:756917569176035345Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomesingle-strand binding protein family9e-0855.5
NC_020291:117983:143785143785144114330Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomesingle stranded DNA-binding protein9e-0855.5
NC_010321:2319820:234300623430062343458453Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completesingle-strand binding protein1e-0755.1
NC_014964:2301835:232502123250212325473453Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completesingle-strand-binding protein1e-0755.1
NC_015558:1813500:182650818265081827035528Streptococcus parauberis KCTC 11537 chromosome, complete genomesingle strand binding protein (SSB)2e-0754.7
NC_010682:288415:292737292737293294558Ralstonia pickettii 12J chromosome 1, complete sequencesingle-strand binding protein2e-0754.7
NC_010610:755000:768629768629769150522Lactobacillus fermentum IFO 3956, complete genomesingle-strand binding protein2e-0754.7
NC_015682:205900:243613243613244059447Thermodesulfobacterium sp. OPB45 chromosome, complete genomesingle-strand binding protein2e-0754.3
NC_020829:636773:641229641229641726498Pseudomonas denitrificans ATCC 13867, complete genomesingle-stranded DNA-binding protein4e-0753.5
NC_006350:595893:601561601561602115555Burkholderia pseudomallei K96243 chromosome 1, complete sequencesingle-strand DNA-binding protein4e-0753.5
NC_007434:788500:792916792916793473558Burkholderia pseudomallei 1710b chromosome I, complete sequencesingle-strand DNA-binding protein4e-0753.5
NC_010801:629347:638431638431638985555Burkholderia multivorans ATCC 17616 chromosome 3, completesingle-strand DNA-binding protein4e-0753.1
NC_010087:265625:285872285872286426555Burkholderia multivorans ATCC 17616 chromosome 3, completesingle-strand binding protein4e-0753.1
NC_010674:2011403:201640120164012016808408Clostridium botulinum B str. Eklund 17B, complete genomesingle-strand binding protein family5e-0753.1
NC_015703:5865921:586845758684575868804348Runella slithyformis DSM 19594 chromosome, complete genomesingle-strand binding protein7e-0752.8
NC_017094:828836:842663842663843085423Leptospirillum ferrooxidans C2-3, complete genomesinglestranded DNA-binding protein7e-0752.8
NC_014828:2605798:262313426231342623580447Ethanoligenens harbinense YUAN-3 chromosome, complete genomesingle-strand binding protein8e-0752.4
NC_010336:733751:744867744867745355489Francisella philomiragia subsp. philomiragia ATCC 25017, completesingle-strand DNA binding protein8e-0752.4
NC_017033:1052000:105671510567151057194480Frateuria aurantia DSM 6220 chromosome, complete genomesingle stranded DNA-binding protein1e-0652
NC_010003:605961:612736612736613251516Petrotoga mobilis SJ95, complete genomesingle-strand binding protein1e-0651.6
NC_012913:1041969:105048810504881050979492Aggregatibacter aphrophilus NJ8700, complete genomesingle-stranded DNA-binding protein (SSB) (Helix-destabilizingprotein)2e-0651.2
NC_014448:626909:642569642569643108540Mycoplasma hyorhinis HUB-1 chromosome, complete genomeSingle-stranded DNA-binding protein2e-0651.2
NC_006582:2944237:297954629795462979968423Bacillus clausii KSM-K16, complete genomesingle-strand DNA-binding protein2e-0651.2
NC_009718:731670:736096736096736506411Fervidobacterium nodosum Rt17-B1, complete genomesingle-strand binding protein3e-0650.8
NC_002939:2315402:236821423682142368633420Geobacter sulfurreducens PCA, complete genomesingle-strand binding protein2e-0650.8
NC_002939:2337402:236821423682142368633420Geobacter sulfurreducens PCA, complete genomesingle-strand binding protein2e-0650.8
NC_014972:137184:142624142624143016393Desulfobulbus propionicus DSM 2032 chromosome, complete genomesingle-strand-binding protein2e-0650.8
NC_015696:105748:115060115060115548489Francisella sp. TX077308 chromosome, complete genomeSingle-stranded DNA-binding protein3e-0650.4
NC_009633:2592000:261829626182962618712417Alkaliphilus metalliredigens QYMF chromosome, complete genomesingle-strand binding protein3e-0650.4
NC_015726:406450:413400413400413948549Cupriavidus necator N-1 chromosome 1, complete sequencessDNA-binding protein4e-0650.4
NC_013851:3142182:314798431479843148499516Allochromatium vinosum DSM 180 chromosome, complete genomesingle-strand binding protein4e-0650.1
NC_004757:2657490:267719526771952677644450Nitrosomonas europaea ATCC 19718, complete genomeSingle-strand binding protein family4e-0650.1
NC_008757:206036:234180234180234824645Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completesingle-strand binding protein7e-0649.3