Pre_GI Gene

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Host: NC_012984 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012984:1027898 Lactobacillus plantarum JDM1, complete genome

Host Lineage: Lactobacillus plantarum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain is a Chinese commercial lactic acid bacterium with several probiotic functions. Lactobacillus plantarum are commonly isolated from plant material, and the gastrointestinal tract of animals. This organism is used in the production of fermented foods such as saurkraut, kimchi and sourdough bread. This organism is also of interest as a probiotic to maintain and regulate the human intestinal microflora.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
10278981028224327transcription regulatorQuickGO ontologyBLASTP
10284811028696216hypothetical proteinBLASTP
10287791029513735Phage anti-repressor proteinQuickGO ontologyBLASTP
10295251029734210hypothetical proteinBLASTP
10297471029962216hypothetical protein
10299491030158210hypothetical protein
10303271030452126hypothetical protein
10308651031125261hypothetical proteinBLASTP
10312681031447180prophage Lp3 protein 4QuickGO ontology
10314811031735255hypothetical protein
10317381031938201hypothetical proteinBLASTP
10322631033123861hypothetical proteinBLASTP
10331231033749627phage proteinQuickGO ontologyBLASTP
10337461034207462single-strand binding proteinQuickGO ontologyBLASTP
10342231034789567hypothetical proteinBLASTP
10347951035487693hypothetical proteinBLASTP
10355371036343807phage replication initiation proteinQuickGO ontologyBLASTP
10363431037128786DNA replication proteinQuickGO ontologyBLASTP
10372641037572309hypothetical proteinBLASTP
10378471038278432Phage transcriptional activator RinAQuickGO ontologyBLASTP
10386061038767162hypothetical protein
10387891039448660putative HNH nucleaseQuickGO ontologyBLASTP
10397211040074354hypothetical proteinBLASTP
104006110419771917prophage Lp3 protein 15 terminase large subunitQuickGO ontologyBLASTP
104219710433151119prophage Lp3 protein 17 portal proteinQuickGO ontologyBLASTP
10432871043892606proteaseQuickGO ontologyBLASTP
104389910452811383capsid proteinQuickGO ontologyBLASTP
10453721045650279hypothetical proteinBLASTP
1045930104599869hypothetical protein
10460011046408408hypothetical proteinBLASTP
10464081046788381hypothetical proteinBLASTP
10468031047444642hypothetical proteinBLASTP
10475211047895375hypothetical proteinBLASTP
10479401048125186hypothetical protein
104815710533075151SLT domain proteinQuickGO ontologyBLASTP