Pre_GI: BLASTP Hits

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Query: NC_012917:833721:856908 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 856908, End: 858173, Length: 1266

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:1038500:1042630104263010438951266Pectobacterium wasabiae WPP163, complete genomeextracellular solute-binding protein family 10811
NC_004547:913553:9385309385309397951266Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative sugar ABC transporter, periplasmic binding protein0795
NC_011653:1574415:1579050157905015803001251Thermosipho africanus TCF52B, complete genomelactose-binding protein1e-111403
NC_015385:2135456:2146837214683721481171281Treponema succinifaciens DSM 2489 chromosome, complete genomeextracellular solute-binding protein family 11e-79296
NC_020995:3300751:3300751330075133020461296Enterococcus casseliflavus EC20, complete genomehypothetical protein6e-76285
NC_015732:773143:7933897933897946871299Spirochaeta caldaria DSM 7334 chromosome, complete genomeextracellular solute-binding protein family 13e-71269
NC_015675:2567000:2580950258095025822211272Mesorhizobium opportunistum WSM2075 chromosome, complete genomefamily 1 extracellular solute-binding protein5e-32139
NC_019973:2417000:2430787243078724320581272Mesorhizobium australicum WSM2073, complete genomeABC-type sugar transport system, periplasmic component2e-31136
NC_014923:2439197:2453772245377224550431272Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeextracellular solute-binding protein family 18e-28125
NC_015671:874500:8980898980898994231335Cellvibrio gilvus ATCC 13127 chromosome, complete genomefamily 1 extracellular solute-binding protein9e-1891.7
NC_017167:1088713:1097975109797510992851311Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1extracellular solute-binding protein4e-1582.8
NC_015577:1462874:1468358146835814696891332Treponema azotonutricium ZAS-9 chromosome, complete genomeputative family 1 extracellular solute-binding protein6e-1582.4
NC_010516:127000:1428581428581441321275Clostridium botulinum B1 str. Okra, complete genomeputative sugar-binding protein2e-1377
NC_017297:122383:1381391381391394131275Clostridium botulinum F str. 230613 chromosome, complete genomeputative sugar-binding protein2e-1377
NC_009699:122000:1378741378741391481275Clostridium botulinum F str. Langeland chromosome, complete genomesugar-binding protein2e-1377
NC_010520:121077:1368521368521381261275Clostridium botulinum A3 str. Loch Maree, complete genomeputative sugar-binding protein5e-1376.3
NC_009698:120119:1358701358701371441275Clostridium botulinum A str. Hall chromosome, complete genomesugar-binding protein5e-1375.9
NC_009697:120117:1358681358681371421275Clostridium botulinum A str. ATCC 19397 chromosome, completesugar-binding protein5e-1375.9
NC_009495:128000:1430651430651443391275Clostridium botulinum A str. ATCC 3502 chromosome, complete genomesugar-binding protein5e-1375.9
NC_012563:122000:1370011370011382751275Clostridium botulinum A2 str. Kyoto, complete genomeputative arabinose-binding protein7e-1375.5
NC_015052:2383865:2388169238816923895091341Bifidobacterium longum subsp. infantis 157F, complete genomeABC transporter substrate-binding protein7e-1375.5
NC_016582:1751988:1764160176416017654761317Streptomyces bingchenggensis BCW-1 chromosome, complete genomesolute binding lipoprotein9e-1375.1
NC_012658:125500:1405101405101417841275Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative arabinose-binding protein1e-1275.1
NC_021182:300415:3160413160413173181278Clostridium pasteurianum BC1, complete genomeABC-type sugar transport system, periplasmic component1e-1275.1
NC_014206:1694330:1714328171432817156381311Geobacillus sp. C56-T3 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-1273.9
NC_013093:2895511:2906250290625029075991350Actinosynnema mirum DSM 43827, complete genomeextracellular solute-binding protein family 17e-1168.9
NC_016582:7737930:7748351774835177497091359Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative substrate-binding transport lipoprotein6e-1168.9
NC_013721:1204566:1214195121419512156371443Gardnerella vaginalis 409-05, complete genomebacterial extracellular solute-binding protein1e-1068.6
NC_016582:7946000:7952288795228879535861299Streptomyces bingchenggensis BCW-1 chromosome, complete genomeMalE-type ABC sugar transport system periplasmic component3e-1066.6
NC_013929:257635:2629282629282642051278Streptomyces scabiei 87.22 chromosome, complete genomesolute binding lipoprotein3e-0963.2
NC_006322:2886404:2908934290893429102381305Bacillus licheniformis ATCC 14580, complete genomeAraN6e-0962.4
NC_010407:3174470:3193095319309531944141320Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative sugar-binding transport lipoprotein4e-0859.7
NC_014829:3741843:3753994375399437552951302Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeextracellular solute-binding protein family 17e-0858.9
NC_011567:2327870:2334876233487623362251350Anoxybacillus flavithermus WK1, complete genomeABC-type sugar transport system, periplasmic component2e-0757.4
NC_016582:8243727:8250390825039082516911302Streptomyces bingchenggensis BCW-1 chromosome, complete genomesugar binding secreted protein3e-0756.6
NC_013235:1938889:1944081194408119454781398Nakamurella multipartita DSM 44233, complete genomeextracellular solute-binding protein family 13e-0756.6
NC_013174:309943:3295333295333308551323Jonesia denitrificans DSM 20603, complete genomeextracellular solute-binding protein family 12e-0653.9
NC_020260:440000:4639564639564652451290Cronobacter sakazakii Sp291, complete genomeABC transporter periplasmic binding protein3e-0653.5
NC_013642:574673:5924275924275936051179Thermotoga naphthophila RKU-10, complete genomeextracellular solute-binding protein family 14e-0653.1
NC_010524:933191:9517829517829530891308Leptothrix cholodnii SP-6, complete genomeextracellular solute-binding protein family 14e-0653.1
NC_013172:466300:4684394684394697731335Brachybacterium faecium DSM 4810, complete genomeABC-type sugar transport system, periplasmic component8e-0652