Pre_GI Gene

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Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:257635 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
256815257642828peptidoglycan-binding surface proteinQuickGO ontologyBLASTP
257635258522888hypothetical proteinBLASTP
258692259189498hypothetical protein
2593532608431491beta-glucosidaseQuickGO ontologyBLASTP
260932261849918sugar ABC transporterQuickGO ontologyBLASTP
261862262833972sugar ABC transporter permeaseQuickGO ontologyBLASTP
2629282642051278solute binding lipoproteinQuickGO ontologyBLASTP
2645562655691014lacI family transcriptional regulatorQuickGO ontologyBLASTP
265748266617870beta-lactamaseQuickGO ontologyBLASTP
266688267665978hypothetical proteinBLASTP
267795268343549nucleotide deaminaseQuickGO ontologyBLASTP
268746269354609acetyltransferaseQuickGO ontologyBLASTP
270571271128558hypothetical proteinBLASTP
271505271903399hypothetical protein
272125272241117hypothetical protein
272287272937651hypothetical protein
273125273376252hypothetical protein
2736612749171257hypothetical proteinBLASTP
2750292761621134hypothetical proteinBLASTP