Pre_GI: BLASTP Hits

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Query: NC_012917:2641000:2658688 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 2658688, End: 2659671, Length: 984

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008800:2298000:230957923095792310562984Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,zinc transporter6e-144510
NC_020063:2449554:246840224684022469385984Enterobacteriaceae bacterium strain FGI 57, complete genomeMg2+/Co2+ transporter9e-131466
NC_014121:1848971:185284018528401853823984Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completezinc transporter1e-130466
NC_021066:1712905:171475817147581715741984Raoultella ornithinolytica B6, complete genomezinc transporter5e-129461
NC_011294:1465500:146554114655411466524984Salmonella enterica subsp. enterica serovar Enteritidis strzinc transporter3e-128458
NC_015761:1630000:164244516424451643428984Salmonella bongori NCTC 12419, complete genomemembrane transport protein9e-128456
NC_011149:1429523:145200014520001452983984Salmonella enterica subsp. enterica serovar Agona str. SL483,zinc transport protein ZntB9e-128456
NC_006511:1273162:129564812956481296631984Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative membrane transport protein9e-128456
NC_011147:1267005:128949112894911290474984Salmonella enterica subsp. enterica serovar Paratyphi A strzinc transporter9e-128456
NC_003198:1336894:135938213593821360365984Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative membrane transport protein2e-127455
NC_013716:1756545:177196817719681772951984Citrobacter rodentium ICC168, complete genomezinc transport protein3e-127454
AC_000091:1407693:140976414097641410747984Escherichia coli W3110 DNA, complete genomepredicted Zn(II) transporter1e-126452
NC_010473:1493983:149547014954701496453984Escherichia coli str. K-12 substr. DH10B, complete genomepredicted Zn(II) transporter1e-126452
NC_000913:1404000:140607414060741407057984Escherichia coli K12, complete genomezinc transporter1e-126452
CP002185:1493280:149658914965891497572984Escherichia coli W, complete genomepredicted Zn(II) transporter1e-126452
NC_012759:1296000:129813312981331299116984Escherichia coli BW2952 chromosome, complete genomezinc transporter1e-126452
NC_012947:2366000:238818123881812389164984Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completezinc transporter1e-126452
NC_012967:1403733:140522014052201406203984Escherichia coli B str. REL606 chromosome, complete genomezinc transporter1e-126452
NC_016613:2759908:275990827599082760855948Vibrio sp. EJY3 chromosome 1, complete sequencemembrane transport protein3e-30132
NC_016027:1647110:1674311167431116754921182Gluconacetobacter xylinus NBRC 3288, complete genomemagnesium/cobalt transporter3e-1686.3
NC_008344:554229:5707545707545717551002Nitrosomonas eutropha C91, complete genomemagnesium and cobalt transport protein CorA1e-1377.8
NC_017188:753039:755486755486756445960Bacillus amyloliquefaciens TA208 chromosome, complete genomemagnesium and cobalt transport protein CorA2e-1376.6
NC_014551:809025:811471811471812430960Bacillus amyloliquefaciens DSM 7, complete genomemagnesium transport in/out via permease (no H+)2e-1376.6
NC_017190:794820:797267797267798112846Bacillus amyloliquefaciens LL3 chromosome, complete genomemagnesium transport in/out via permease (no H+)3e-1376.3
NC_017191:754453:756900756900757745846Bacillus amyloliquefaciens XH7 chromosome, complete genomedivalent cation transport protein3e-1376.3
NC_010511:6067000:6105251610525161063211071Methylobacterium sp. 4-46 chromosome, complete genomeMg2 transporter protein CorA family protein4e-1375.5
NC_008255:4208913:4229484422948442305601077Cytophaga hutchinsonii ATCC 33406, complete genomemagnesium and cobalt transport protein6e-1272
NC_010546:553774:5537745537745549401167Cyanothece sp. ATCC 51142 chromosome circular, complete sequencemagnesium and cobalt transport protein7e-1271.6
NC_010516:2777205:278716327871632788098936Clostridium botulinum B1 str. Okra, complete genomeputative magnesium and cobalt transport protein CorA2e-1170.5
NC_014935:1223817:123735212373521238287936Nitratifractor saLSUginis DSM 16511 chromosome, complete genomemg2 transporter protein cora family protein4e-1168.9
NC_010520:2807429:281765128176512818586936Clostridium botulinum A3 str. Loch Maree, complete genomeputative magnesium and cobalt transport protein CorA6e-1168.6
NC_012724:1781554:179924717992471800224978Burkholderia glumae BGR1 chromosome 1, complete genomeMagnesium and cobalt transport protein CorA9e-1168.2
NC_012914:5225609:5229032522903252300361005Paenibacillus sp. JDR-2, complete genomemagnesium and cobalt transport protein CorA8e-1168.2
NC_013406:1145268:116547811654781166434957Paenibacillus sp. Y412MC10 chromosome, complete genomemagnesium and cobalt transport protein CorA2e-1066.6
NC_013741:1037176:1039350103935010403811032Archaeoglobus profundus DSM 5631, complete genomemagnesium and cobalt transport protein CorA3e-1066.6
NC_018664:2279687:2284369228436922854331065Clostridium acidurici 9a chromosome, complete genomemagnesium and cobalt transport protein CorA3e-1066.2
NC_012883:636560:6430156430156441031089Thermococcus sibiricus MM 739, complete genomeMagnesium and cobalt transport protein CorA5e-1065.5
NC_005085:1269787:1327397132739713284341038Chromobacterium violaceum ATCC 12472, complete genomemagnesium and cobalt transport protein6e-1065.1
NC_015846:1065692:1087455108745510885461092Capnocytophaga canimorsus Cc5 chromosome, complete genomemagnesium transport protein corA1e-0963.9
NC_015425:906969:928335928335929276942Clostridium botulinum BKT015925 chromosome, complete genomeputative divalent cation transporter4e-0962.4
NC_017297:2796000:280308828030882804023936Clostridium botulinum F str. 230613 chromosome, complete genomeputative magnesium and cobalt transport protein CorA8e-0961.6
UCMB5137:409500:410243410243411202960Bacillus atrophaeus UCMB-5137putative divalent cation transport protein9e-0961.2
NC_009483:4015777:4019538401953840206051068Geobacter uraniireducens Rf4 chromosome, complete genomemagnesium and cobalt transport protein CorA1e-0861.2
NC_020409:2856481:2893203289320328942671065Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeMagnesium and cobalt transport protein CorA2e-0860.1
NC_015520:224136:237246237246238214969Mahella australiensis 50-1 BON chromosome, complete genomemagnesium and cobalt transport protein CorA2e-0860.1
NC_000853:569576:5916735916735927281056Thermotoga maritima MSB8, complete genomedivalent cation transport-related protein5e-0858.9
NC_015683:1176449:1182661118266111837341074Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein5e-0858.9
NC_017317:1173619:1179831117983111809041074Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein5e-0858.9
NC_019892:7734519:7755759775575977568111053Singulisphaera acidiphila DSM 18658 chromosome, complete genomemagnesium Mg(2+) and cobalt Co(2+) transport protein CorA5e-0858.5
NC_014221:78500:989079890799905999Truepera radiovictrix DSM 17093 chromosome, complete genomeMg2 transporter protein CorA family protein6e-0858.5
NC_013730:933089:949430949430950380951Spirosoma linguale DSM 74, complete genomemagnesium and cobalt transport protein CorA1e-0757.8
NC_013642:323799:3458903458903469451056Thermotoga naphthophila RKU-10, complete genomemagnesium and cobalt transport protein CorA1e-0757.4
NC_013446:2919005:293596229359622936936975Comamonas testosteroni CNB-2, complete genomemagnesium and cobalt transport protein CorA3e-0756.6
NC_013156:1182609:118260911826091183562954Methanocaldococcus fervens AG86, complete genomemagnesium and cobalt transport protein CorA5e-0755.5
NC_000909:963984:965086965086966039954Methanocaldococcus jannaschii DSM 2661, complete genomemagnesium and cobalt transport protein (corA)6e-0755.5
NC_006085:1859191:186966318696631870661999Propionibacterium acnes KPA171202, complete genomeputative magnesium transport protein9e-0754.7
NC_016511:1811171:182160818216081822606999Propionibacterium acnes TypeIA2 P.acn31 chromosome, completemagnesium transport protein9e-0754.7
NC_016516:1799521:181250018125001813498999Propionibacterium acnes TypeIA2 P.acn33 chromosome, completemagnesium transport protein9e-0754.7
NC_013887:1601730:160281616028161603769954Methanocaldococcus sp. FS406-22 chromosome, complete genomemagnesium and cobalt transport protein CorA8e-0754.7
NC_014122:143446:143446143446144390945Methanocaldococcus infernus ME chromosome, complete genomemagnesium and cobalt transport protein CorA1e-0654.3
NC_012811:410776:4170854170854180951011Methylobacterium extorquens AM1 megaplasmid, complete sequenceputative metal ion transporter1e-0653.9
NC_016512:1810625:182103418210341822032999Propionibacterium acnes TypeIA2 P.acn17 chromosome, completemagnesium transport protein3e-0652.8
NC_018000:2054098:206095020609502061915966Sinorhizobium fredii USDA 257 chromosome, complete genomemetal ion transporter YfjQ6e-0652