Pre_GI: BLASTP Hits

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Query: NC_011979:1683964:1703996 Geobacter sp. FRC-32, complete genome

Start: 1703996, End: 1705957, Length: 1962

Host Lineage: Geobacter daltonii; Geobacter; Geobacteraceae; Desulfuromonadales; Proteobacteria; Bacteria

General Information: This organism is able to reduce uranium and may be useful for in situ bioremediation of uranium. An iron(III)-reducing bacterium isolated from the uranium-contaminated subsurface of the U.S. Department of Energy NABIR Field Research Center (FRC), Oak Ridge, Tennessee, USA. Several recent studies have verified using cultivation-independent methods that the Geobacteraceae are predominant in subsurface environments where dissimilatory metal reduction is important to the remediation of uranium and other contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011979:1683964:1692822169282216948252004Geobacter sp. FRC-32, complete genomediguanylate cyclase with GAF sensor1e-88328
NC_012918:3558500:3561119356111935621891071Geobacter sp. M21 chromosome, complete genomediguanylate cyclase1e-1895.5
NC_014973:1257625:1276035127603512771051071Geobacter sp. M18 chromosome, complete genomediguanylate cyclase1e-1895.5
NC_015064:649201:6567876567876578781092Acidobacterium sp. MP5ACTX9 chromosome, complete genomediguanylate cyclase with GAF sensor4e-1893.6
NC_014484:52311:837868378684682897Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein6e-1789.7
NC_010551:1412139:1426967142696714282111245Burkholderia ambifaria MC40-6 chromosome 1, complete sequencediguanylate cyclase with GAF sensor8e-1789.4
NC_013894:672840:6998066998067022742469Thermocrinis albus DSM 14484 chromosome, complete genomediguanylate cyclase with PAS/PAC, CBS and GAF sensors3e-1687.4
NC_015577:1974821:1977256197725619787671512Treponema azotonutricium ZAS-9 chromosome, complete genomeNifA subfamily transcriptional regulator, Fis family transcriptional regulator6e-1686.3
NC_018870:303217:3085463085463103841839Thermacetogenium phaeum DSM 12270 chromosome, complete genomephytochrome-like protein Cph6e-1686.3
NC_012438:1211940:1225711122571112281912481Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeggdef domain protein2e-1584.7
NC_012969:142000:1446581446581460101353Methylovorus glucosetrophus SIP3-4 chromosome, complete genomePAS/PAC/GAF sensor-containing diguanylate cyclase2e-1584.7
NC_017277:1283477:1305253130525313081652913Synechocystis sp. PCC 6803, complete genomesensory histidine kinase Hik171e-1378.6
NC_017052:1283720:1305451130545113083632913Synechocystis sp. PCC 6803 substr. PCC-N, complete genomesensory histidine kinase Hik171e-1378.6
NC_017039:1283732:1305463130546313083752913Synechocystis sp. PCC 6803 substr. PCC-P, complete genomesensory histidine kinase Hik171e-1378.6
NC_000911:1284552:1306436130643613093482913Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-1378.6
NC_010814:2394250:239896023989602399508549Geobacter lovleyi SZ, complete genomeputative GAF sensor protein2e-1378.2
NC_010688:3229820:3263585326358532652401656Xanthomonas campestris pv. campestris, complete genomeputative sensor protein3e-1377.8
NC_003902:1680414:1683407168340716851041698Xanthomonas campestris pv. campestris str. ATCC 33913, completesensor histidine kinase3e-1377.4
NC_014960:72737:8665186651898063156Anaerolinea thermophila UNI-1, complete genomehypothetical protein1e-1275.5
NC_011661:203929:2249442249442272562313Dictyoglomus turgidum DSM 6724, complete genomemetal dependent phosphohydrolase2e-1274.7
NC_003919:1716831:1720078172007817217781701Xanthomonas axonopodis pv. citri str. 306, complete genomesensor histidine kinase5e-1273.2
NC_011126:163878:1834581834581857762319Hydrogenobaculum sp. Y04AAS1, complete genomediguanylate cyclase with PAS/PAC sensor1e-1172
NC_009348:2034500:2047816204781620491141299Aeromonas salmonicida subsp. salmonicida A449, complete genomeGGDEF domain-containing protein1e-1172
NC_014484:1163576:1187621118762111891321512Spirochaeta thermophila DSM 6192 chromosome, complete genometranscriptional regulatory protein1e-1172
NC_020409:1407857:1444022144402214461062085Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative Diguanylate cyclase2e-1171.6
NC_011757:5102732:5112434511243451167054272Methylobacterium chloromethanicum CM4, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)2e-1171.2
NC_011979:1683964:169188516918851692799915Geobacter sp. FRC-32, complete genomeresponse regulator receiver modulated GAF sensor protein2e-1171.2
NC_009943:748788:7651417651417700754935Candidatus Desulfococcus oleovorans Hxd3, complete genomeserine/threonine protein kinase2e-1171.2
NC_015732:529201:5292015292015303431143Spirochaeta caldaria DSM 7334 chromosome, complete genomediguanylate cyclase4e-1170.5
NC_011145:2543321:2569474256947425717682295Anaeromyxobacter sp. K, complete genomediguanylate cyclase4e-1170.5
NC_018870:757416:7994737994738011341662Thermacetogenium phaeum DSM 12270 chromosome, complete genomediguanylate cyclase YdaM4e-1170.5
NC_013440:5543667:5559422555942255605041083Haliangium ochraceum DSM 14365, complete genomeresponse regulator receiver modulated diguanylate cyclase3e-1170.5
NC_011891:2607812:2633460263346026357542295Anaeromyxobacter dehalogenans 2CP-1, complete genomediguanylate cyclase3e-1170.5
NC_014973:3151701:3154188315418831565092322Geobacter sp. M18 chromosome, complete genomeresponse regulator receiver modulated diguanylate cyclase/phosphodiesterase5e-1170.1
NC_019970:336472:3389693389693406331665Thermoanaerobacterium thermosaccharolyticum M0795, complete genomediguanylate cyclase (GGDEF) domain-containing protein6e-1169.7
NC_015942:2060349:2066075206607520677451671Acidithiobacillus ferrivorans SS3 chromosome, complete genomediguanylate cyclase/phosphodiesterase7e-1169.7
NC_015732:2839030:2844698284469828457111014Spirochaeta caldaria DSM 7334 chromosome, complete genomediguanylate cyclase1e-1068.9
NC_020291:2487575:2489410248941024911251716Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomehypothetical protein1e-1068.6
NC_012559:1064821:1063772106377210648241053Laribacter hongkongensis HLHK9, complete genomeDiguanylate cyclase2e-1068.2
NC_016147:2820232:2852209285220928539361728Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative sensor protein4e-1067.4
NC_012108:1324885:1331589133158913329111323Desulfobacterium autotrophicum HRM2, complete genometwo domain sensory box histidine kinase (PAS/PAC domain/GGDEF domain protein)6e-1066.6
NC_006138:2630338:2642868264286826448501983Desulfotalea psychrophila LSv54, complete genomehypothetical protein9e-1065.9
NC_010995:1459831:1474498147449814768162319Cellvibrio japonicus Ueda107, complete genomesensory box/GGDEF family protein1e-0965.9
NC_016112:562570:5625705625705642971728Methylomicrobium alcaliphilum chromosome, complete genomeresponse regulator receiver modulated diguanylate cyclase/phosphodiesterase1e-0965.5
NC_012968:1191037:1199115119911512005601446Methylotenera mobilis JLW8, complete genomediguanylate cyclase with PAS/PAC and GAF sensors1e-0965.5
NC_011283:1901229:1922454192245419241331680Klebsiella pneumoniae 342 chromosome, complete genomediguanylate cyclase1e-0965.5
NC_017507:155938:1792671792671813392073Marinobacter adhaerens HP15 plasmid pHP-187, complete sequenceprotein containing diguanylate cyclase, predicted domains1e-0965.5
NC_007645:3227098:3240398324039832420651668Hahella chejuensis KCTC 2396, complete genomeResponse regulator containing a CheY-like receiver domain and a GGDEF domain1e-0965.5
NC_007947:1229807:1250399125039912515831185Methylobacillus flagellatus KT, complete genomediguanylate cyclase (GGDEF domain)2e-0965.1
NC_010718:2551000:2576468257646825783391872Natranaerobius thermophilus JW/NM-WN-LF, complete genomediguanylate cyclase and metal dependent phosphohydrolase2e-0964.7
NC_019902:97987:1175791175791186821104Thioalkalivibrio nitratireducens DSM 14787, complete genomeresponse regulator protein with GGDEF domain2e-0964.7
NC_012785:638000:6406866406866420951410Kosmotoga olearia TBF 19.5.1, complete genomeresponse regulator receiver modulated diguanylate cyclase2e-0964.7
NC_013216:1748241:1765192176519217667301539Desulfotomaculum acetoxidans DSM 771, complete genomediguanylate cyclase with PAS/PAC sensor2e-0964.7
NC_016112:2903767:2920980292098029231872208Methylomicrobium alcaliphilum chromosome, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)3e-0964.3
NC_016803:2612694:2636605263660526381011497Desulfovibrio desulfuricans ND132 chromosome, complete genomediguanylate cyclase3e-0964.3
NC_009486:1737703:178865117886511789298648Thermotoga petrophila RKU-1 chromosome, complete genomediguanylate cyclase3e-0964.3
NC_014219:2284000:2308453230845323100061554Bacillus selenitireducens MLS10 chromosome, complete genomediguanylate cyclase with GAF sensor4e-0963.9
NC_013173:1671288:1676285167628516772921008Desulfomicrobium baculatum DSM 4028, complete genomeresponse regulator receiver modulated diguanylate cyclase4e-0963.9
NC_012796:4693500:4719606471960647220652460Desulfovibrio magneticus RS-1, complete genomeGGDEF domain protein3e-0963.9
NC_013446:2062862:2064058206405820665472490Comamonas testosteroni CNB-2, complete genomediguanylate cyclase/phosphodiesterase5e-0963.5
NC_017506:2504746:250701425070142507967954Marinobacter adhaerens HP15 chromosome, complete genomesensory box/GGDEF family protein5e-0963.5
NC_017075:4259460:4259460425946042621742715Rubrivivax gelatinosus IL144, complete genomePAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase6e-0963.2
NC_013889:1514799:1516391151639115175481158Thioalkalivibrio sp. K90mix chromosome, complete genomediguanylate cyclase7e-0963.2
NC_013524:392089:3920893920893943322244Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomediguanylate cyclase with PAS/PAC and GAF sensors8e-0962.8
NC_010814:1336943:135126913512691351982714Geobacter lovleyi SZ, complete genomediguanylate cyclase7e-0962.8
NC_015573:893862:909972909972910757786Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomediguanylate cyclase7e-0962.8
NC_013894:1194458:1206419120641912077981380Thermocrinis albus DSM 14484 chromosome, complete genomediguanylate cyclase1e-0862.4
NC_007759:1028977:1052221105222110532911071Syntrophus aciditrophicus SB, complete genomeresponse regulator protein with GGDEF domain1e-0862.4
NC_015572:65597:6559765597697574161Methylomonas methanica MC09 chromosome, complete genomePAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase1e-0862.4
NC_012660:4734363:474847547484754749422948Pseudomonas fluorescens SBW25 chromosome, complete genomeputative GGDEF/GAF domain sensory box protein1e-0862.4
NC_008800:3279468:3280995328099532820471053Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,diguanylate cyclase/phosphodiesterase domain-containing protein2e-0862
NC_015593:2696000:2714665271466527168332169Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeresponse regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)1e-0862
NC_014311:263963:3051833051833065861404Ralstonia solanacearum PSI07 chromosome, complete genomediguanylate kinase1e-0862
NC_014654:422013:4220134220134255613549Halanaerobium sp. 'sapolanicus' chromosome, complete genomediguanylate cyclase and metal dependent phosphohydrolase1e-0862
NC_018868:4174794:419154141915414192494954Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomediguanylate cyclase2e-0861.6
NC_015224:1440283:145592914559291456831903Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,diguanylate cyclase/phosphodiesterase domain-containing protein2e-0861.6
NC_021171:608315:6109966109966135182523Bacillus sp. 1NLA3E, complete genomePAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase2e-0861.2
NC_014323:292958:3043333043333054091077Herbaspirillum seropedicae SmR1 chromosome, complete genomediguanylate cyclase2e-0861.2
NC_007498:1072112:1076128107612810778731746Pelobacter carbinolicus DSM 2380, complete genomesensory box histidine kinase2e-0861.2
NC_015138:2025000:2043816204381620454231608Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completediguanylate cyclase2e-0861.2
NC_015185:485866:4890684890684907111644Desulfurobacterium thermolithotrophum DSM 11699 chromosome,diguanylate cyclase2e-0861.2
NC_013889:1514799:1514799151479915162501452Thioalkalivibrio sp. K90mix chromosome, complete genomediguanylate cyclase with PAS/PAC and GAF sensors3e-0860.8
NC_010943:1379707:1398376139837614004332058Stenotrophomonas maltophilia K279a, complete genomeputative transmembrane GGDEF EAL signalling protein3e-0860.8
NC_015379:1600715:1602802160280216041511350Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative diguanylate cyclase with PAS/PAC and GAF sensors3e-0860.8
NC_009937:4090404:4092572409257240938851314Azorhizobium caulinodans ORS 571, complete genomehypothetical conserved protein3e-0860.8
NC_008463:632869:6433476433476470843738Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein3e-0860.8
NC_002978:200878:2008782008782022601383Wolbachia endosymbiont of Drosophila melanogaster, complete genomeresponse regulator/GGDEF domain protein4e-0860.5
NC_009485:7021228:7045383704538370466181236Bradyrhizobium sp. BTAi1 chromosome, complete genomediguanylate cyclase4e-0860.5
NC_009445:1453132:1454143145414314553901248Bradyrhizobium sp. ORS 278 chromosome, complete genomehypothetical protein6e-0860.1
NC_009486:1103915:110453811045381105389852Thermotoga petrophila RKU-1 chromosome, complete genomediguanylate cyclase6e-0860.1
NC_014844:2828370:2837353283735328387261374Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomediguanylate cyclase5e-0860.1
NC_017249:908500:9380779380779391261050Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein5e-0860.1
NC_014166:3072703:3094576309457630971162541Arcobacter nitrofigilis DSM 7299 chromosome, complete genomediguanylate cyclase/phosphodiesterase5e-0860.1
AC_000091:2027648:2028460202846020301541695Escherichia coli W3110 DNA, complete genomepredicted diguanylate cyclase5e-0860.1
NC_014657:473479:4836754836754856812007Caldicellulosiruptor owensensis OL chromosome, complete genome5e-0860.1
NC_012947:1769438:1809320180932018110141695Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completediguanylate cyclase5e-0860.1
NC_010498:1210145:1231371123137112330471677Escherichia coli SMS-3-5, complete genomediguanylate cyclase5e-0860.1
NC_016822:2201388:2202200220220022038941695Shigella sonnei 53G, complete genomediguanylate cyclase5e-0860.1
NC_002939:1021297:1024618102461810259101293Geobacter sulfurreducens PCA, complete genomeGGDEF domain protein5e-0860.1
NC_015422:1163752:1180323118032311827732451Alicycliphilus denitrificans K601 chromosome, complete genomePAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase7e-0859.7
NC_013093:2471574:2505398250539825066901293Actinosynnema mirum DSM 43827, complete genomediguanylate cyclase7e-0859.7
NC_013889:1159343:118663011866301187607978Thioalkalivibrio sp. K90mix chromosome, complete genomediguanylate cyclase6e-0859.7
NC_007925:3911323:391927339192733919956684Rhodopseudomonas palustris BisB18, complete genomediguanylate cyclase (GGDEF domain)9e-0859.3
NC_016627:3881000:3883492388349238850241533Clostridium clariflavum DSM 19732 chromosome, complete genomediguanylate cyclase domain-containing protein9e-0859.3
NC_012026:415447:4279314279314292981368Anaplasma marginale str. Florida, complete genomePutative two-component response regulator with GGDEF and receiver domains9e-0859.3
NC_009439:794498:8112638112638128851623Pseudomonas mendocina ymp, complete genomeresponse regulator receiver modulated diguanylate cyclase9e-0859.3
NC_014624:551510:5756525756525776822031Eubacterium limosum KIST612 chromosome, complete genomesensory box sensor/GGDEF/EAL domain protein8e-0859.3
NC_014910:3458475:3461544346154434640242481Alicycliphilus denitrificans BC chromosome, complete genomediguanylate cyclase8e-0859.3
NC_015064:3370840:3372880337288033742411362Acidobacterium sp. MP5ACTX9 chromosome, complete genomediguanylate cyclase8e-0859.3
NC_011205:1227373:1247643124764312493551713Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853cellulose synthesis regulatory protein1e-0758.9
NC_016810:2027311:2027311202731120290231713Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-0758.9
NC_016857:2027311:2027311202731120290231713Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein1e-0758.9
NC_016863:2029340:2029340202934020310521713Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein1e-0758.9
NC_017046:2026672:2026672202667220283841713Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein1e-0758.9
NC_014836:1052214:1054802105480210564511650Desulfurispirillum indicum S5 chromosome, complete genomediguanylate cyclase1e-0758.9
NC_014501:477336:477336477336478184849Cyanothece sp. PCC 7822 chromosome, complete genomediguanylate cyclase1e-0758.9
NC_021066:601029:6216856216856232621578Raoultella ornithinolytica B6, complete genomediguanylate cyclase YedQ1e-0758.9
NC_012416:205925:2097252097252111011377Wolbachia sp. wRi, complete genomeresponse regulator PleD2e-0758.5
NC_010125:2295500:2295802229580222972171416Gluconacetobacter diazotrophicus PAl 5, complete genomeputative signalling protein, GGDEF family2e-0758.5
NC_011365:502620:5026205026205040381419Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomediguanylate cyclase1e-0758.5
NC_012969:1574330:1598034159803415995451512Methylovorus glucosetrophus SIP3-4 chromosome, complete genomePAS/PAC sensor-containing diguanylate cyclase1e-0758.5
NC_015410:3093465:3095553309555330967791227Pseudomonas mendocina NK-01 chromosome, complete genomeresponse regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase1e-0758.5
NC_010501:1286971:1292082129208212931671086Pseudomonas putida W619, complete genomediguanylate cyclase2e-0758.2
NC_015572:3723498:3735252373525237362861035Methylomonas methanica MC09 chromosome, complete genomediguanylate cyclase2e-0758.2
NC_014376:2964731:2978427297842729811832757Clostridium saccharolyticum WM1 chromosome, complete genomediguanylate cyclase and metal dependent phosphohydrolase2e-0758.2
NC_017030:4062699:4086520408652040879081389Corallococcus coralloides DSM 2259 chromosome, complete genomeresponse regulator/GGDEF domain-containing protein2e-0758.2
NC_005824:214500:2282682282682299531686Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130GGDEF family protein2e-0758.2
NC_007645:3434795:3444124344412434457431620Hahella chejuensis KCTC 2396, complete genomeResponse regulator containing a CheY-like receiver domain and a GGDEF domain3e-0757.8
NC_009654:1729159:174077917407791741657879Marinomonas sp. MWYL1, complete genomediguanylate cyclase with PAS/PAC sensor3e-0757.8
NC_009439:4404942:4406940440694044106743735Pseudomonas mendocina ymp, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)3e-0757.8
NC_015761:1970042:1970042197004219717481707Salmonella bongori NCTC 12419, complete genomehypothetical protein3e-0757.8
NC_000911:3075896:3075896307589630785502655Synechocystis sp. PCC 6803, complete genomePleD-like protein2e-0757.8
NC_017039:3073724:3073724307372430763782655Synechocystis sp. PCC 6803 substr. PCC-P, complete genomePleD gene product2e-0757.8
NC_017052:3073713:3073713307371330763672655Synechocystis sp. PCC 6803 substr. PCC-N, complete genomeprotein PleD2e-0757.8
NC_016745:2161408:2184269218426921869802712Oceanimonas sp. GK1 chromosome, complete genomehypothetical protein4e-0757.4
NC_007109:1105251:1109198110919811105501353Rickettsia felis URRWXCal2, complete genomeRegulatory components of sensory transduction system3e-0757.4
NC_014394:808734:8087348087348101881455Gallionella capsiferriformans ES-2 chromosome, complete genomediguanylate cyclase with PAS/PAC and GAF sensors3e-0757.4
NC_011146:2916223:2916223291622329185652343Geobacter bemidjiensis Bem, complete genomePTSINtr with GAF domain, PtsP3e-0757.4
NC_009850:661802:6651936651936664941302Arcobacter butzleri RM4018, complete genomeGGDEF domain protein3e-0757.4
NC_011729:3955310:3973796397379639765042709Cyanothece sp. PCC 7424 chromosome, complete genomediguanylate cyclase5e-0757
NC_009253:2927802:2927802292780229290551254Desulfotomaculum reducens MI-1 chromosome, complete genomediguanylate cyclase5e-0757
NC_016745:2785346:2814229281422928171082880Oceanimonas sp. GK1 chromosome, complete genomeputative periplasmic ligand-binding sensor protein4e-0757
NC_013959:2801557:2824036282403628260512016Sideroxydans lithotrophicus ES-1 chromosome, complete genomediguanylate cyclase with PAS/PAC sensor4e-0757
NC_008702:2942246:2965210296521029670421833Azoarcus sp. BH72, complete genomeGGDEF family protein4e-0757
NC_009664:10718:2010620106220191914Kineococcus radiotolerans SRS30216, complete genomediguanylate cyclase/phosphodiesterase with GAF sensor4e-0757
NC_014152:397177:413984413984414652669Thermincola sp. JR, complete genomediguanylate cyclase4e-0757
NC_014733:1573171:1596972159697215984681497Methylovorus sp. MP688 chromosome, complete genomediguanylate cyclase with pas/pac sensor7e-0756.6
NC_021184:3533500:3538803353880335414452643Desulfotomaculum gibsoniae DSM 7213, complete genomePAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein6e-0756.6
NC_012440:423217:446578446578447480903Persephonella marina EX-H1, complete genomeresponse regulator PleD6e-0756.6
NC_010674:3362071:3362071336207133641582088Clostridium botulinum B str. Eklund 17B, complete genomeggdef domain protein6e-0756.6
NC_015161:36668:4282342823461953373Deinococcus proteolyticus MRP chromosome, complete genome5e-0756.6
NC_012483:1567253:1587454158745415885631110Acidobacterium capsulatum ATCC 51196, complete genomeGAF domain/GGDEF domain protein5e-0756.6
NC_006576:2423250:2432957243295724360703114Synechococcus elongatus PCC 6301, complete genomehypothetical protein9e-0756.2
NC_013716:5141269:5141269514126951423331065Citrobacter rodentium ICC168, complete genomehypothetical protein9e-0756.2
NC_012912:1229333:1238015123801512395321518Dickeya zeae Ech1591, complete genomediguanylate cyclase with PAS/PAC and GAF sensors8e-0756.2
NC_009943:1637582:1640362164036216414681107Candidatus Desulfococcus oleovorans Hxd3, complete genomediguanylate cyclase7e-0756.2
NC_009784:253852:2538522538522561792328Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein7e-0756.2
NC_012796:2757500:2775451277545127767131263Desulfovibrio magneticus RS-1, complete genomeresponse regulator receiver protein7e-0756.2
NC_013446:4511602:4522130452213045236951566Comamonas testosteroni CNB-2, complete genomediguanylate cyclase7e-0756.2
NC_009254:745706:7775837775837791061524Burkholderia vietnamiensis G4 chromosome 3, complete sequencediguanylate cyclase1e-0655.8
NC_007086:4489153:4493004449300444945091506Xanthomonas campestris pv. campestris str. 8004, complete genomeresponse regulator1e-0655.8
NC_003902:4430621:4435421443542144369261506Xanthomonas campestris pv. campestris str. ATCC 33913, completeresponse regulator1e-0655.8
NC_007404:2743877:2773375277337527750871713Thiobacillus denitrificans ATCC 25259, complete genomePutative diguanylate cyclase (GGDEF domain)1e-0655.8
NC_013739:5012394:5030168503016850322222055Conexibacter woesei DSM 14684, complete genomediguanylate cyclase and metal dependent phosphohydrolase1e-0655.8
NC_013739:717352:7440707440707460221953Conexibacter woesei DSM 14684, complete genomediguanylate cyclase1e-0655.8
NC_016641:5306000:5327831532783153298191989Paenibacillus terrae HPL-003 chromosome, complete genomediguanylate cyclase1e-0655.8
NC_007604:1875268:1880981188098118840943114Synechococcus elongatus PCC 7942, complete genomediguanylate cyclase (GGDEF domain) with PAS/PAC sensor1e-0655.8
NC_014654:221707:2364332364332389612529Halanaerobium sp. 'sapolanicus' chromosome, complete genomediguanylate cyclase with PAS/PAC sensor9e-0755.8
NC_014733:1223359:1254227125422712568362610Methylovorus sp. MP688 chromosome, complete genomediguanylate cyclase/phosphodiesterase with pas/pac sensor(s)1e-0655.5
NC_016024:1185388:1189432118943211917172286Candidatus Chloracidobacterium thermophilum B chromosome chromosomePAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein1e-0655.5
NC_014152:421481:4312864312864323081023Thermincola sp. JR, complete genomediguanylate cyclase1e-0655.5
NC_009254:700891:7070217070217085711551Burkholderia vietnamiensis G4 chromosome 3, complete sequencediguanylate cyclase1e-0655.5
NC_017192:497950:5007825007825039193138Arcobacter sp. L, complete genomehypothetical protein2e-0655.1
NC_007575:601256:6203916203916222261836Sulfurimonas denitrificans DSM 1251, complete genomediguanylate cyclase2e-0655.1
NC_002947:4994335:499710049971004998098999Pseudomonas putida KT2440, complete genomesensory box protein2e-0655.1
NC_004129:5373886:5449980544998054515631584Pseudomonas fluorescens Pf-5, complete genomeGGDEF domain protein2e-0655.1
NC_008577:4611431:4624559462455946257011143Shewanella sp. ANA-3 chromosome 1, complete sequencediguanylate cyclase2e-0655.1
NC_013939:724469:726012726012726911900Deferribacter desulfuricans SSM1, complete genomesignal transduction response regulator2e-0655.1
NC_010337:565730:571006571006571980975Heliobacterium modesticaldum Ice1, complete genometwo component diguanylate cyclase2e-0655.1
NC_014500:4883794:4892448489244848947692322Dickeya dadantii 3937 chromosome, complete genomesensory box protein2e-0655.1
NC_016616:2699350:2699350269935027020192670Dechlorosoma suillum PS chromosome, complete genomePAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein2e-0655.1
NC_009075:3113393:311339331133933114328936Burkholderia pseudomallei 668 chromosome II, complete sequencediguanylate cyclase2e-0654.7
NC_006351:3159630:315869831586983159633936Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein2e-0654.7
NC_006349:2311817:231088523108852311820936Burkholderia mallei ATCC 23344 chromosome 2, complete sequenceGGDEF domain protein2e-0654.7
NC_008784:1151305:115130511513051152240936Burkholderia mallei SAVP1 chromosome I, complete sequencediguanylate cyclase2e-0654.7
NC_007435:1825741:182480918248091825744936Burkholderia pseudomallei 1710b chromosome II, complete sequenceGGDEF domain protein2e-0654.7
NC_009512:469000:4821324821324858753744Pseudomonas putida F1, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)2e-0654.7
NC_014834:959986:9958759958759985862712Rhodopseudomonas palustris DX-1 chromosome, complete genomediguanylate cyclase/phosphodiesterase2e-0654.7
NC_016112:2301023:2309223230922323120932871Methylomicrobium alcaliphilum chromosome, complete genomediguanylate cyclase2e-0654.7
NC_013124:1439915:1439915143991514427222808Acidimicrobium ferrooxidans DSM 10331, complete genomediguanylate cyclase/phosphodiesterase3e-0654.3
NC_012440:1080675:1080675108067510819671293Persephonella marina EX-H1, complete genomesignal transduction response regulator3e-0654.3
NC_012796:1049034:1061214106121410631031890Desulfovibrio magneticus RS-1, complete genomeputative signaling protein3e-0654.3
NC_018697:618832:6389586389586433854428Cycloclasticus sp. P1 chromosome, complete genomeresponse regulator receiver modulated diguanylate cyclase/phosphodiesterase3e-0654.3
NC_014220:1162948:1181410118141011844843075Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomediguanylate cyclase/phosphodiesterase with GAF sensor3e-0654.3
NC_015733:443122:4535964535964573393744Pseudomonas putida S16 chromosome, complete genomePAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase3e-0654.3
NC_014541:4167916:4188445418844541895031059Ferrimonas balearica DSM 9799 chromosome, complete genomediguanylate cyclase3e-0654.3
NC_016751:1740265:1759470175947017611281659Marinitoga piezophila KA3 chromosome, complete genomediguanylate cyclase domain-containing protein3e-0654.3
NC_007626:3522265:352580635258063526525720Magnetospirillum magneticum AMB-1, complete genomeFOG: GGDEF domain4e-0653.9
NC_012483:729000:7500967500967516221527Acidobacterium capsulatum ATCC 51196, complete genomesensory box/GGDEF family protein4e-0653.9
NC_007907:960104:999164999164999844681Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-0653.9
NC_015690:7518732:7534888753488875366271740Paenibacillus mucilaginosus KNP414 chromosome, complete genomeresponse regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)4e-0653.9
NC_011830:3081726:3093712309371230953161605Desulfitobacterium hafniense DCB-2, complete genomediguanylate cyclase4e-0653.9
NC_008800:2013450:2033085203308520347941710Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein4e-0653.9
NC_010424:697187:7245927245927260071416Candidatus Desulforudis audaxviator MP104C, complete genomediguanylate cyclase3e-0653.9
NC_012658:99899:1183041183041193741071Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative diguanylate cyclase5e-0653.5
NC_013421:1173051:1195964119596411975621599Pectobacterium wasabiae WPP163, complete genomediguanylate cyclase5e-0653.5
NC_012796:1049034:1093541109354110954151875Desulfovibrio magneticus RS-1, complete genomeputative signaling protein5e-0653.5
NC_008786:3291700:3305661330566133074991839Verminephrobacter eiseniae EF01-2, complete genomediguanylate cyclase5e-0653.5
NC_007912:4661141:4678408467840846798381431Saccharophagus degradans 2-40, complete genomeresponse regulator receiver domain protein (CheY-like)5e-0653.5
NC_017506:4380196:4387208438720843884011194Marinobacter adhaerens HP15 chromosome, complete genomediguanylate cyclase5e-0653.5
NC_012912:777592:7951677951677967771611Dickeya zeae Ech1591, complete genomediguanylate cyclase5e-0653.5
NC_012912:4737703:4747041474704147493562316Dickeya zeae Ech1591, complete genomediguanylate cyclase with PAS/PAC and GAF sensors5e-0653.5
NC_007498:2618131:2626318262631826275201203Pelobacter carbinolicus DSM 2380, complete genomeresponse regulator/FOG:GGDEF domain protein4e-0653.5
NC_007907:1996194:2008825200882520104471623Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-0653.5
NC_004547:1873390:1928679192867919300071329Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein7e-0653.1
NC_007974:1135863:1142022114202211440672046Ralstonia metallidurans CH34 chromosome 2, complete sequencediguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)7e-0653.1
NC_009663:851143:8714898714898737562268Sulfurovum sp. NBC37-1, complete genomesignal transduction response regulator7e-0653.1
NC_009138:1843998:1882878188287818844521575Herminiimonas arsenicoxydans, complete genomehypothetical protein7e-0653.1
NC_009439:4404942:4424017442401744251171101Pseudomonas mendocina ymp, complete genomediguanylate cyclase6e-0653.1
NC_012108:4417483:4435016443501644363081293Desulfobacterium autotrophicum HRM2, complete genomeGGDEF domain family protein6e-0653.1
NC_010424:697187:731288731288732082795Candidatus Desulforudis audaxviator MP104C, complete genomediguanylate cyclase6e-0653.1
NC_007947:1229807:1229807122980712319752169Methylobacillus flagellatus KT, complete genomeresponse regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)6e-0653.1
NC_010730:1519458:1524413152441315256481236Sulfurihydrogenibium sp. YO3AOP1, complete genomediguanylate cyclase6e-0653.1
NC_009667:1076718:1092461109246110939061446Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequencediguanylate cyclase with PAS/PAC sensor6e-0653.1
NC_013854:330543:3345543345543368062253Azospirillum sp. B510, complete genomeoxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase6e-0653.1
NC_011978:699500:715625715625716464840Thermotoga neapolitana DSM 4359, complete genomeDiguanylate cyclase7e-0652.8
NC_011146:3376816:3384287338428733855851299Geobacter bemidjiensis Bem, complete genomediguanylate cyclase8e-0652.8
NC_014761:1795304:1815614181561418172121599Oceanithermus profundus DSM 14977 chromosome, complete genomediguanylate cyclase8e-0652.8
NC_016622:170000:1742381742381764992262Azospirillum lipoferum 4B, complete genomeputative diguanylate cyclase/phosphodiesterase with GAF domain9e-0652.8