Pre_GI: BLASTP Hits

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Query: NC_011769:247202:258427 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Start: 258427, End: 259959, Length: 1533

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014246:1457992:1467064146706414685961533Mobiluncus curtisii ATCC 43063 chromosome, complete genomehypothetical protein4e-129462
NC_020126:7661551:7675299767529976767051407Myxococcus stipitatus DSM 14675, complete genome5-methylcytosine-specific restriction enzyme B7e-1995.9
NC_017047:4298207:4301801430180143033721572Rahnella aquatilis HX2 chromosome, complete genomeATPase AAA2e-1894.7
NC_015061:4203767:4207860420786042094311572Rahnella sp. Y9602 chromosome, complete genomeATPase associated with various cellular activities AAA_52e-1894.7
NC_007973:2888824:290212929021292903040912Ralstonia metallidurans CH34 chromosome 1, complete sequenceATPase associated with various cellular activities, AAA_55e-1892.8
NC_013131:8029621:8048620804862080505001881Catenulispora acidiphila DSM 44928, complete genomeATPase associated with various cellular activities AAA_52e-1790.5
NC_008697:55406:7055370553732522700Nocardioides sp. JS614 plasmid pNOCA01, complete sequenceATPase associated with various cellular activities, AAA_56e-1789.4
NC_016887:4343830:4355709435570943568931185Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein7e-1789
NC_013203:1351941:1359570135957013617682199Atopobium parvulum DSM 20469, complete genomeATPase associated with various cellular activities AAA_59e-1789
NC_016111:4115097:4134447413444741355891143Streptomyces cattleya NRRL 8057, complete genomeATPase1e-1688.2
NC_015740:3631326:3645611364561136474521842Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeGTPase subunit of restriction endonuclease-like protein7e-1685.9
NC_013595:2592590:2597891259789126003592469Streptosporangium roseum DSM 43021, complete genomeGTPase subunit of restriction endonuclease-like protein2e-1584.7
NC_013929:7278414:7302598730259873044541857Streptomyces scabiei 87.22 chromosome, complete genomeATPase1e-1584.7
NC_010617:774914:8136028136028151851584Kocuria rhizophila DC2201, complete genomeMcrBC restriction endonuclease system protein McrB4e-1583.2
NC_012759:4501206:4514465451446545158441380Escherichia coli BW2952 chromosome, complete genome5-methylcytosine-specific restriction enzyme subunit McrB7e-1582.4
AC_000091:4569379:4582638458263845840171380Escherichia coli W3110 DNA, complete genome5-methylcytosine-specific restriction enzyme McrBC, subunit McrB7e-1582.4
NC_013961:73037:9141891418930221605Erwinia amylovora, complete genomeATPase1e-1482
NC_013971:73037:9141891418930221605Erwinia amylovora ATCC 49946 chromosome, complete genomerestriction enzyme1e-1482
NC_008313:1:1477314773171512379Ralstonia eutropha H16 chromosome 1, complete sequence5-Methylcytosine-specific restriction enzyme B8e-1582
NC_014830:13179:4125041250430491800Intrasporangium calvum DSM 43043 chromosome, complete genomeATPase associated with various cellular activities AAA_58e-1582
NC_008009:4421992:4433043443304344354602418Acidobacteria bacterium Ellin345, complete genomeATPase associated with various cellular activities, AAA_51e-1481.6
NC_009512:5166459:5179356517935651819442589Pseudomonas putida F1, complete genomeATPase associated with various cellular activities, AAA_54e-1480.1
NC_017986:1885613:1925320192532019279442625Pseudomonas putida ND6 chromosome, complete genomeATPase4e-1480.1
NC_009802:352641:3757523757523775241773Campylobacter concisus 13826, complete genomethiamine-phosphate pyrophosphorylase4e-1479.7
NC_007969:1095438:1116101111610111185332433Psychrobacter cryohalolentis K5, complete genomeATPase associated with various cellular activities, AAA_55e-1479.7
NC_013595:8603188:8618950861895086210462097Streptosporangium roseum DSM 43021, complete genomeGTPase subunit of restriction endonuclease-like protein5e-1479.7
CP002797:4411763:4438350443835044404252076Escherichia coli NA114, complete genomePutative GTPase6e-1479.3
NC_015581:680460:7006777006777023501674Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeATPase6e-1479.3
NC_015588:1213873:1230453123045312332902838Isoptericola variabilis 225 chromosome, complete genomeATPase associated with various cellular activities AAA_58e-1479
NC_020207:1346579:1379793137979313822102418Enterococcus faecium NRRL B-2354, complete genomemcrB7e-1479
NC_010943:493002:5057195057195082802562Stenotrophomonas maltophilia K279a, complete genomehypothetical protein1e-1378.6
NC_019903:1345585:1345585134558513478672283Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,GTPase subunit of restriction endonuclease1e-1378.6
NC_011750:4978000:4980740498074049818251086Escherichia coli IAI39 chromosome, complete genome1e-1378.6
NC_009800:4529504:4538288453828845403632076Escherichia coli HS, complete genomeputative ATPase family associated with various cellular activities (AAA)3e-1377.4
CP002185:4791811:4795728479572847978032076Escherichia coli W, complete genomeputative 5-methylcytosine-specific restriction enzyme with GTPase activity3e-1377.4
CP002516:4199133:4215067421506742171422076Escherichia coli KO11, complete genomeATPase associated with various cellular activities AAA_53e-1377.4
NC_016902:4199133:4215067421506742171422076Escherichia coli KO11FL chromosome, complete genomeATPase3e-1377.4
NC_015873:2197412:2205991220599122083992409Megasphaera elsdenii DSM 20460, complete genome5-methylcytosine-specific restriction enzyme B3e-1377
NC_010424:422029:4432404432404445381299Candidatus Desulforudis audaxviator MP104C, complete genome8e-1375.5
NC_008705:868623:9259519259519277801830Mycobacterium sp. KMS, complete genomeATPase associated with various cellular activities, AAA_51e-1275.5
NC_008146:861319:9172229172229190511830Mycobacterium sp. MCS, complete genomeATPase associated with various cellular activities, AAA_51e-1275.5
NC_007005:4411388:4433777443377744353301554Pseudomonas syringae pv. syringae B728a, complete genomeATPas1e-1275.1
NC_004757:2730057:2765586276558627678082223Nitrosomonas europaea ATCC 19718, complete genomeAAA ATPase superfamily1e-1274.7
NC_014391:1967167:1975040197504019770492010Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeATPase4e-1273.6
NC_010625:1551430:1575500157550015778452346Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceATPase associated with various cellular activities AAA_53e-1273.6
NC_014151:3663295:3670100367010036722892190Cellulomonas flavigena DSM 20109 chromosome, complete genomeATPase associated with various cellular activities AAA_54e-1273.2
NC_006396:2115334:2131282213128221329161635Haloarcula marismortui ATCC 43049 chromosome I, complete sequencehypothetical protein2e-1171.2
NC_013922:331847:3646383646383658701233Natrialba magadii ATCC 43099 chromosome, complete genomeATPase associated with various cellular activities AAA_52e-1171.2
NC_015388:1020747:1024968102496810272352268Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeATPase associated with various cellular activities AAA_52e-1171.2
NC_009338:3359500:3384873338487333869752103Mycobacterium gilvum PYR-GCK chromosome, complete genomeATPase2e-1170.9
NC_016002:1048420:1068363106836310707442382Pseudogulbenkiania sp. NH8B, complete genome5-methylcytosine-specific restriction protein McrB2e-1170.9
NC_014738:2011554:2032454203245420338421389Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,ATPase2e-1170.9
NC_020125:1802000:1804061180406118054491389Riemerella anatipestifer RA-CH-2, complete genomehypothetical protein2e-1170.9
NC_002163:129800:1402891402891426402352Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomeputative endonuclease3e-1170.5
NC_016048:3947663:3958317395831739601791863Oscillibacter valericigenes Sjm18-20, complete genomeputative 5-methylcytosine-specific restriction enzyme B6e-1169.3
NC_010337:1999405:2014379201437920158571479Heliobacterium modesticaldum Ice1, complete genomeGTPase subunit of restriction endonuclease, putative1e-1068.6
NC_018721:943801:9546929546929566171926Psychroflexus torquis ATCC 700755 chromosome, complete genome5-methylcytosine restriction component McrB1e-1068.2
NC_015167:3469968:3474883347488334771142232Cellulophaga lytica DSM 7489 chromosome, complete genomeATPase2e-1068.2
NC_006624:873525:8817518817518842372487Thermococcus kodakarensis KOD1, complete genomeputative 5-methylcytosine restriction system, GTPase subunit2e-1068.2
NC_016023:1959255:1973077197307719754912415Bacillus coagulans 36D1 chromosome, complete genomeATPase2e-1067.8
NC_015458:2338437:2357103235710323599942892Pusillimonas sp. T7-7 chromosome, complete genomehypothetical protein2e-1067.8
NC_011757:3486283:3489548348954834917192172Methylobacterium chloromethanicum CM4, complete genomeATPase associated with various cellular activities AAA_52e-1067.4
NC_012779:996879:1006078100607810083032226Edwardsiella ictaluri 93-146, complete genomeATPase associated with various cellular activities, AAA_53e-1067
NC_013158:1686239:1697515169751516997792265Halorhabdus utahensis DSM 12940, complete genomeATPase associated with various cellular activities AAA_54e-1067
NC_007509:1043602:1050923105092310530132091Burkholderia sp. 383 chromosome 3, complete sequenceGTPase subunit of restriction endonuclease-like4e-1066.6
NC_020181:3328844:3356089335608933588722784Enterobacter aerogenes EA1509E, complete genomehypothetical protein4e-1066.6
NC_009665:2352528:2358338235833823601551818Shewanella baltica OS185 chromosome, complete genomeGTPase subunit of restriction endonuclease-like protein1e-0965.5
NC_020388:1869000:1879626187962618808551230Natronomonas moolapensis 8.8.11 complete genomeAAA-type ATPase domain protein3e-0963.9
NC_010163:614634:6575056575056599492445Acholeplasma laidlawii PG-8A chromosome, complete genomeMcrBC 5-methylcytosine restriction system component4e-0963.5
NC_014762:1715190:1722228172222817241021875Sulfuricurvum kujiense DSM 16994 chromosome, complete genomeATPase associated with various cellular activities AAA_56e-0962.8
NC_015663:2090442:2107000210700021089821983Enterobacter aerogenes KCTC 2190 chromosome, complete genomeMcrB-like protein7e-0962.4
NC_015562:1413264:1420598142059814226312034Methanotorris igneus Kol 5 chromosome, complete genomeATPase4e-0860.1
NC_005810:4306716:4319776431977643218392064Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein2e-0757.8
NC_003143:398748:4030494030494051122064Yersinia pestis CO92, complete genomehypothetical protein2e-0757.8
NC_008149:318860:3222573222573243202064Yersinia pestis Nepal516, complete genomehypothetical protein2e-0757.8
NC_010159:1288000:1291081129108112931442064Yersinia pestis Angola, complete genomehypothetical protein2e-0757.8
NC_009381:3680638:3693891369389136959542064Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-0757.8
NC_008150:4373722:4386953438695343890162064Yersinia pestis Antiqua, complete genomehypothetical protein2e-0757.8
NC_014029:452248:4565494565494586122064Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-0757.8
NC_017154:394401:3987013987014007642064Yersinia pestis D106004 chromosome, complete genomehypothetical protein2e-0757.8
NC_017160:396600:4009014009014029642064Yersinia pestis D182038 chromosome, complete genomehypothetical protein2e-0757.8
NC_017168:687471:7007027007027027652064Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-0757.8
NC_017265:4065625:4078856407885640809192064Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-0757.8
NC_015508:296856:3170493170493194242376Agrobacterium sp. H13-3 chromosome linear, complete sequenceATPase2e-0757.8
NC_004088:4202247:4215478421547842175442067Yersinia pestis KIM, complete genomehypothetical protein2e-0757.8
NC_020388:1479568:1535400153540015377392340Natronomonas moolapensis 8.8.11 complete genomeAAA-type ATPase domain protein3e-0757
NC_016816:3974895:3986393398639339885642172Pantoea ananatis LMG 5342, complete genome5-methylcytosine-specific restriction enzyme B1e-0654.7
NC_015581:1731120:1731120173112017329671848Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeATPase5e-0653.1