Pre_GI: BLASTP Hits

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Query: NC_010612:4837346:4854804 Mycobacterium marinum M, complete genome

Start: 4854804, End: 4855946, Length: 1143

Host Lineage: Mycobacterium marinum; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium marinum is commonly found in fresh and salt water in North America. This bacterium, a close relative of M. tuberculosis, causes a tuberculosis-like disease in frogs, fish and other cold-blooded animals, and a peripheral granulomatous disease in humans. Human infections can be persistent and may lead to systemic infection and arthritis. M. marinum is photochromogenic, i.e. it produces bright yellow pigmentation (mainly beta-carotene) upon exposure to visible light. Infection is followed by a 2-8 week incubation period resulting in suppuration (pus) and organized ulcerating granulomas (tumorous lesions), predominantly localized in lymphatic and tendon sheaths, and cooler body tissues in the extremities.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006361:4149701:4158604415860441597491146Nocardia farcinica IFM 10152, complete genomeDNA polymerase III subunit beta3e-25116
NC_015673:1:2262226234461185Corynebacterium resistens DSM 45100 chromosome, complete genomeDNA polymerase III subunit beta4e-24112
NC_007164:2446879:2369236935531185Corynebacterium jeikeium K411, complete genomeDNA polymerase III, beta subunit7e-23108
NC_015564:4727630:1972197235641593Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genomeDNA polymerase III subunit beta2e-22107
NC_015312:1:2771277139011131Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeDNA polymerase III subunit beta2e-22106
NC_013093:1:2628262837641137Actinosynnema mirum DSM 43827, complete genomeDNA polymerase III, beta subunit1e-21104
NC_003888:4251867:4268713426871342698431131Streptomyces coelicolor A3(2), complete genomeDNA polymerase III subunit beta6e-21102
NC_002677:3253057:2081208132801200Mycobacterium leprae TN, complete genomeDNA polymerase III subunit beta1e-20101
NC_011896:3252925:2081208132801200Mycobacterium leprae Br4923, complete genomeputative DNA polymerase III, beta subunit1e-20101
NC_002677:1:2081208132801200Mycobacterium leprae TN, complete genomeDNA polymerase III subunit beta1e-20101
NC_011896:1:2081208132801200Mycobacterium leprae Br4923, complete genomeputative DNA polymerase III, beta subunit1e-20101
NC_014830:4012999:2567256736941128Intrasporangium calvum DSM 43043 chromosome, complete genomeDNA polymerase III, beta subunit3e-2099.8
NC_015953:3684065:3689253368925336903831131Streptomyces sp. SirexAA-E chromosome, complete genomeDNA polymerase III subunit beta3e-2099.8
NC_011886:4376261:2127212732511125Arthrobacter chlorophenolicus A6, complete genomeDNA polymerase III, beta subunit3e-2099.4
NC_014151:4106624:2426242635561131Cellulomonas flavigena DSM 20109 chromosome, complete genomeDNA polymerase III, beta subunit5e-2099
NC_006087:1:2083208332281146Leifsonia xyli subsp. xyli str. CTCB07, complete genomeDNA polymerase III subunit beta8e-2098.2
NC_008711:4579997:1995199531191125Arthrobacter aurescens TC1, complete genomeDNA polymerase III, beta subunit1e-1997.8
NC_015145:4232283:2347234734711125Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeDNA polymerase III subunit beta2e-1996.7
NC_013521:4240468:2337233734671131Sanguibacter keddieii DSM 10542, complete genomeDNA polymerase III, beta subunit3e-1996.7
NC_006085:2544421:1868186833791512Propionibacterium acnes KPA171202, complete genomeDNA polymerase III subunit beta4e-1996.3
NC_015125:1597600:1601432160143216025891158Microbacterium testaceum StLB037, complete genomeDNA polymerase sliding clamp subunit3e-1996.3
NC_014039:2479500:2131213133751245Propionibacterium acnes SK137 chromosome, complete genomeDNA polymerase III, beta subunit3e-1996.3
NC_013929:5135285:5137597513759751387271131Streptomyces scabiei 87.22 chromosome, complete genomeDNA polymerase III subunit beta4e-1995.9
NC_018750:3964784:3969808396980839709381131Streptomyces venezuelae ATCC 10712, complete genomeDNA polymerase III beta subunit5e-1995.9
NC_008541:4679022:1965196530891125Arthrobacter sp. FB24 chromosome 1, complete sequenceDNA polymerase III, beta subunit7e-1995.1
NC_014550:3839389:2256225633831128Arthrobacter arilaitensis Re117, complete genomeDNA polymerase III subunit beta1e-1894.4
NC_013595:10329633:2672267238111140Streptosporangium roseum DSM 43021, complete genomeDNA-directed DNA polymerase2e-1894
NC_014210:5752651:3397339745361140Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,DNA polymerase III, beta subunit6e-1788.6
NC_007333:3626510:2824282439421119Thermobifida fusca YX, complete genomeDNA polymerase III subunit beta2e-1687
NC_007333:1:2824282439421119Thermobifida fusca YX, complete genomeDNA polymerase III subunit beta2e-1687
NC_013510:1:2867286739941128Thermomonospora curvata DSM 43183, complete genomeDNA polymerase III, beta subunit2e-1686.7
NC_015859:952500:9725569725569735601005Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein6e-1685.5
NC_017221:2268276:2270009227000922711331125Bifidobacterium longum subsp. longum KACC 91563 chromosome,DNA polymerase III subunit beta2e-1584
NC_015067:2371428:2239223933631125Bifidobacterium longum subsp. longum JCM 1217, complete genomeDNA polymerase III beta subunit2e-1584
NC_004307:1620500:1622403162240316235271125Bifidobacterium longum NCC2705, complete genomeDNA polymerase III subunit beta2e-1584
NC_015052:2383865:2239223933631125Bifidobacterium longum subsp. infantis 157F, complete genomeDNA polymerase III subunit beta2e-1584
NC_010816:1660066:1664070166407016651941125Bifidobacterium longum DJO10A, complete genomeDNA polymerase sliding clamp subunit2e-1584
NC_014656:1634397:1638401163840116395251125Bifidobacterium longum subsp. longum BBMN68 chromosome, completednan2e-1584
NC_008578:2431074:1921192130841164Acidothermus cellulolyticus 11B, complete genomeDNA polymerase III, beta subunit7e-1478.6
NC_014211:439611:4582334582334593871155Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 plasmidDNA polymerase III, beta subunit8e-1478.6
NC_009922:1:1642164227481107Alkaliphilus oremlandii OhILAs, complete genomeDNA polymerase III, beta subunit1e-1377.8
NC_015687:1:2064206431641101Clostridium acetobutylicum DSM 1731 chromosome, complete genomeDNA polymerase III subunit beta9e-1271.6
NC_003030:1:2064206431641101Clostridium acetobutylicum ATCC 824, complete genomeDNA polymerase III subunit beta9e-1271.6
NC_017167:1648913:1786992178699217880921101Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1DNA polymerase III subunit beta1e-1171.2
NC_014378:525717:1966196630631098Acetohalobium arabaticum DSM 5501 chromosome, complete genomeDNA polymerase III, beta subunit2e-1170.9
NC_005125:3420270:3439067343906734401971131Gloeobacter violaceus PCC 7421, complete genomeDNA polymerase III subunit beta2e-1170.5
NC_021182:1:2006200631061101Clostridium pasteurianum BC1, complete genomeDNA polymerase III, beta subunit2e-1170.1
NC_014392:2513529:3941394150471107Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeDNA polymerase III, beta subunit5e-1168.9
NC_013205:526281:5483965483965495081113Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,DNA polymerase III, beta subunit1e-1067.8
NC_009718:1272296:1295690129569012967931104Fervidobacterium nodosum Rt17-B1, complete genomeDNA polymerase III, beta subunit2e-1067
NC_007350:1:2124212432541131Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,DNA polymerase III beta subunit2e-1067
NC_013165:3146000:1741174128381098Slackia heliotrinireducens DSM 20476, complete genomeDNA polymerase III, beta subunit3e-1066.6
NC_004461:1:2026202631591134Staphylococcus epidermidis ATCC 12228, complete genomeDNA polymerase III subunit beta5e-1065.9
NC_015275:1:1617161727231107Clostridium lentocellum DSM 5427 chromosome, complete genomeDNA polymerase III, beta subunit7e-1065.5
NC_007929:1805000:1532153226711140Lactobacillus salivarius subsp. salivarius UCC118, complete genomeDNA polymerase III, beta chain7e-1065.1
NC_010001:1:1849184929611113Clostridium phytofermentans ISDg, complete genomeDNA polymerase III, beta subunit1e-0964.7
NC_013205:1123280:1147503114750311486121110Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,DNA polymerase III, beta subunit3e-0963.5
NC_013170:1:1872187229691098Cryptobacterium curtum DSM 15641, complete genomeDNA polymerase III, beta subunit5e-0962.8
NC_010718:1:1780178028921113Natranaerobius thermophilus JW/NM-WN-LF, complete genomeDNA polymerase III, beta subunit4e-0962.8
NC_014152:1:1645164527571113Thermincola sp. JR, complete genomeDNA polymerase III, beta subunit5e-0962.4
NC_011837:1:1615161527181104Clostridium kluyveri NBRC 12016, complete genomeDNA polymerase III subunit beta8e-0962
NC_009706:1:1615161527181104Clostridium kluyveri DSM 555 chromosome, complete genomeDNA polymerase III subunit beta8e-0962
NC_011662:1:1813181329221110Thauera sp. MZ1T, complete genomeDNA polymerase III, beta subunit1e-0861.2
NC_012673:1679744:1697774169777416989131140Exiguobacterium sp. AT1b, complete genomeDNA polymerase III, beta subunit2e-0860.8
NC_015425:2752482:2770223277022327713261104Clostridium botulinum BKT015925 chromosome, complete genomeDNA polymerase III subunit beta3e-0859.7
NC_016002:1:1670167027761107Pseudogulbenkiania sp. NH8B, complete genomeDNA polymerase III subunit beta4e-0859.7
NC_018664:1:1683168327801098Clostridium acidurici 9a chromosome, complete genomeDNA polymerase III subunit beta7e-0858.5
NC_014393:1:1715171528181104Clostridium cellulovorans 743B chromosome, complete genomeDNA polymerase III, beta subunit7e-0858.5
NC_014171:1:1802180229471146Bacillus thuringiensis BMB171 chromosome, complete genomeDNA polymerase III subunit beta1e-0758.2
NC_017208:1:1802180229471146Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeDNA polymerase III subunit beta9e-0858.2
NC_014363:2035141:2044311204431120454141104Olsenella uli DSM 7084 chromosome, complete genomeDNA polymerase III, beta subunit9e-0858.2
NC_011567:1:1901190130371137Anoxybacillus flavithermus WK1, complete genomeDNA polymerase sliding clamp subunit1e-0757.4
NC_009952:3522370:3546223354622335473411119Dinoroseobacter shibae DFL 12, complete genomeDNA polymerase III subunit beta2e-0757.4
NC_007498:3655304:1680168027981119Pelobacter carbinolicus DSM 2380, complete genomeDNA polymerase III, beta subunit4e-0756.2
NC_009089:1:1460146026681209Clostridium difficile 630, complete genomeDNA polymerase III, beta chain5e-0755.8
NC_015389:2101841:3292329243951104Coriobacterium glomerans PW2 chromosome, complete genomeDNA polymerase III, beta subunit6e-0755.5
NC_019940:1:2384238434901107Thioflavicoccus mobilis 8321 chromosome, complete genomeDNA polymerase III subunit beta7e-0755.1
NC_020054:4028444:4049803404980340509181116Fibrella aestuarina BUZ 2 drat genomeDNA polymerase III subunit beta9e-0755.1
NC_014098:3372000:1924192430511128Bacillus tusciae DSM 2912 chromosome, complete genomeDNA polymerase III, beta subunit2e-0653.9
NC_020054:4983691:5006258500625850073791122Fibrella aestuarina BUZ 2 drat genomeDNA polymerase III subunit beta2e-0653.5
NC_005085:1:1691169128001110Chromobacterium violaceum ATCC 12472, complete genomeDNA polymerase III subunit beta3e-0653.1
NC_014498:1:1717171728531137Streptococcus pneumoniae 670-6B chromosome, complete genomeDNA polymerase III subunit beta5e-0652.4
NC_014251:243700:2474422474422485781137Streptococcus pneumoniae TCH8431/19A chromosome, complete genomeDNA-directed DNA polymerase5e-0652.4
NC_012469:1:1717171728531137Streptococcus pneumoniae Taiwan19F-14, complete genomeDNA polymerase III, beta subunit6e-0652.4
NC_006513:1695487:1695487169548716965901104Azoarcus sp. EbN1, complete genomeDNA polymerase III (Beta chain)6e-0652.4