Pre_GI: BLASTP Hits

Some Help

Query: NC_010102:931055:942411 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 942411, End: 942554, Length: 144

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011094:2115750:212557421255742125717144Salmonella enterica subsp. enterica serovar Schwarzengrund strphage tail assembly protein3e-2097.1
NC_011205:1391971:139546013954601396029570Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage tail assembly protein2e-0858.2
NC_011274:1299475:130654113065411307110570Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91phage tail fiber assembly protein2e-0858.2
NC_011294:1220526:124264112426411242934294Salmonella enterica subsp. enterica serovar Enteritidis str3e-0857.4
NC_011294:1006630:101675710167571017338582Salmonella enterica subsp. enterica serovar Enteritidis strphage tail fiber assembly protein4e-0856.6
NC_011205:1107998:111738411173841117965582Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853tail fiber assembly like-protein4e-0856.6
NC_008258:2045000:205388620538862054155270Shigella flexneri 5 str. 8401, complete genomehypothetical bacteriophage protein1e-0755.1
NC_004741:2009769:202189520218952022164270Shigella flexneri 2a str. 2457T, complete genomeputative bacteriophage protein1e-0755.1
NC_017328:2090679:210082021008202101089270Shigella flexneri 2002017 chromosome, complete genomeputative bacteriophage protein1e-0755.1
NC_013892:992811:101244310124431012859417Xenorhabdus bovienii SS-2004 chromosome, complete genomeCPS-53 (KpLE1) prophage; tail fiber assembly1e-0755.1
NC_014228:3282500:331458733145873315018432Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein2e-0754.7
NC_013961:3413011:342337834233783423671294Erwinia amylovora, complete genomeTail fiber assembly protein homolog from lambdoid prophage DLP122e-0754.3
NC_013971:335247:347714347714348004291Erwinia amylovora ATCC 49946 chromosome, complete genome3e-0754.3
NC_013361:649518:657331657331657903573Escherichia coli O26:H11 str. 11368 chromosome, complete genometail fiber assembly protein3e-0753.9
NC_011751:1377457:139651413965141397098585Escherichia coli UMN026 chromosome, complete genomeputative tail fiber chaperone; Qin prophage3e-0753.9
NC_013941:733286:740261740261740845585Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeTail fiber assembly protein3e-0753.9
AC_000091:558920:580757580757581320564Escherichia coli W3110 DNA, complete genome3e-0753.9
NC_000913:558920:580757580757581320564Escherichia coli K12, complete genomeDLP12 prophage; predicted tail fiber assembly protein (pseudogene)3e-0753.9
NC_010473:498252:520215520215520652438Escherichia coli str. K-12 substr. DH10B, complete genome4e-0753.5
NC_010473:623810:633475633475633912438Escherichia coli str. K-12 substr. DH10B, complete genome4e-0753.5
NC_011415:644811:652003652003652578576Escherichia coli SE11 chromosome, complete genomeputative phage tail assembly protein4e-0753.5
NC_010473:1712984:172195917219591722534576Escherichia coli str. K-12 substr. DH10B, complete genomeQin prophage; predicted tail fibre assembly protein5e-0753.1
AC_000091:1627049:163602416360241636599576Escherichia coli W3110 DNA, complete genomepredicted tail fibre assembly protein5e-0753.1
NC_000913:1625500:163233416323341632909576Escherichia coli K12, complete genomeQin prophage; predicted tail fibre assembly protein5e-0753.1
NC_012759:1517500:152439315243931524968576Escherichia coli BW2952 chromosome, complete genomeQin prophage; tail fiber assembly protein5e-0753.1
NC_004431:1352906:137255413725541372820267Escherichia coli CFT073, complete genomeHypothetical protein ylcE5e-0753.1
NC_013353:604719:611775611775612338564Escherichia coli O103:H2 str. 12009, complete genometail fiber assembly protein8e-0752.8
AP010958:604719:611775611775612338564Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative tail fiber assembly protein8e-0752.8
NC_009800:2788164:279908627990862799670585Escherichia coli HS, complete genometail fiber assembly protein9e-0752.4
NC_011751:1377457:139787813978781398144267Escherichia coli UMN026 chromosome, complete genomeputative tail fiber assembly protein1e-0652
NC_007712:1182518:119294511929451193556612Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein3e-0650.8
NC_013941:338121:347651347651347782132Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeTail fiber assembly protein3e-0650.4
NC_011740:2737467:275506527550652755649585Escherichia fergusonii ATCC 35469, complete genomeputative tail fibre chaperone; Qin prophage4e-0650.1