Pre_GI: BLASTP Hits

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Query: NC_010067:1116148:1125655 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 1125655, End: 1126425, Length: 771

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005139:518760:526385526385527158774Vibrio vulnificus YJ016 chromosome I, complete sequencephosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC3e-61235
NC_004337:3249791:327125932712593272038780Shigella flexneri 2a str. 301, complete genomeN-acetylgalactosameine-specific IIC component 23e-52205
NC_012967:3191319:321362932136293214408780Escherichia coli B str. REL606 chromosome, complete genomeN-acetylgalactosamine-specific PTS system transporter subunit IIC9e-52203
CP002185:3475991:349840534984053499184780Escherichia coli W, complete genomeN-acetylgalactosamine-specific IIC component9e-52203
NC_017328:3289853:3311322331132233127791458Shigella flexneri 2002017 chromosome, complete genomePTS system N-acetylgalactosamine-specific transporter subunit IID8e-50197
NC_012962:869295:882634882634883419786Photorhabdus asymbiotica, complete genomepts system, n-acetylgalactosamine-specific iic component 1 (eiic-aga (n-acetylgalactosamine-permease iic component 1)1e-46186
NC_016023:875416:884578884578885378801Bacillus coagulans 36D1 chromosome, complete genomePTS system sorbose-specific transporter subunit IIC2e-36152
NC_011294:4604283:462807446280744628853780Salmonella enterica subsp. enterica serovar Enteritidis strPTS system transporter subunit C6e-34144
NC_020063:4653422:466878846687884669588801Enterobacteriaceae bacterium strain FGI 57, complete genomephosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC2e-32139
NC_014376:4369666:436966643696664370448783Clostridium saccharolyticum WM1 chromosome, complete genomephosphotransferase system PTS sorbose-specific IIC subunit6e-31134
NC_008526:343445:3656743656743672721599Lactobacillus casei ATCC 334, complete genomeMannose-specific PTS system component IICD7e-26117
NC_010473:3354052:337646833764683376869402Escherichia coli str. K-12 substr. DH10B, complete genome7e-26117
AC_000091:3258377:328055632805563280957402Escherichia coli W3110 DNA, complete genome7e-26117
NC_013198:394000:4184674184674201551689Lactobacillus rhamnosus GG, complete genomePTS system, mannose-specific IICD component3e-25115
NC_015424:2357600:237913023791302379915786Aeromonas veronii B565 chromosome, complete genomePTS system, IIC component3e-25115
NC_009442:1158268:116523911652391166015777Streptococcus suis 05ZYH33 chromosome, complete genomephosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC3e-24112
NC_013199:392450:411874411874412707834Lactobacillus rhamnosus Lc 705, complete genomePTS system, mannose-specific IIC component (ManY)3e-21102
NC_011134:1222739:122536912253691226178810Streptococcus equi subsp. zooepidemicus str. MGCS10565, completemannose permease IIC component ManY6e-21101
NC_014334:2696000:2706521270652127082151695Lactobacillus casei str. Zhang chromosome, complete genomePTS system mannose-specific transporter subunit IICD2e-2099.8
NC_016023:1769925:178731617873161788116801Bacillus coagulans 36D1 chromosome, complete genomePTS system sorbose-specific transporter subunit IIC5e-2098.2
NC_007946:3855445:386274538627453863491747Escherichia coli UTI89, complete genomeputative phosphotransferase system protein6e-2097.8
NC_008563:3888232:389553238955323896278747Escherichia coli APEC O1, complete genomehypothetical protein6e-2097.8
NC_011742:3799788:381028038102803811026747Escherichia coli S88 chromosome, complete genomephosphotransferase system enzyme IIC6e-2097.8
NC_015519:270637:288540288540289301762Tepidanaerobacter sp. Re1 chromosome, complete genomephosphotransferase system PTS sorbose-specific IIC subunit1e-1893.6
NC_015425:841754:854861854861855679819Clostridium botulinum BKT015925 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IIC4e-1788.6
NC_015389:1977736:200605120060512006845795Coriobacterium glomerans PW2 chromosome, complete genomephosphotransferase system PTS sorbose-specific IIC subunit5e-1788.2
NC_009792:4693152:471072147107214711470750Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein9e-1787.4
NC_003198:3855157:387753638775363878285750Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative PTS system protein2e-1685.9
NC_004631:3841975:386302638630263863775750Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative PTS system protein2e-1685.9
NC_015389:1782825:179732317973231798201879Coriobacterium glomerans PW2 chromosome, complete genomephosphotransferase system PTS sorbose-specific IIC subunit6e-1684.7
NC_010723:1379256:139888813988881399691804Clostridium botulinum E3 str. Alaska E43, complete genomePTS system sorbose-specific iic component5e-1581.6
NC_011660:2509362:251733925173392518145807Listeria monocytogenes HCC23 chromosome, complete genomePTS system fructose-specific transporter subunit IIC7e-1581.3
NC_015061:3147691:314874431487443149541798Rahnella sp. Y9602 chromosome, complete genomePTS system, mannose/fructose/sorbose family, IIC subunit7e-1580.9
NC_016818:3148000:314928031492803150077798Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completePTS system mannose/fructose/sorbose family transporter subunit IIC7e-1580.9
NC_017047:3212000:321334632133463214143798Rahnella aquatilis HX2 chromosome, complete genomePTS system mannose-specific transporter subunit IIC7e-1580.9
NC_013192:2434664:245282124528212453636816Leptotrichia buccalis DSM 1135, complete genomePTS system, mannose/fructose/sorbose family, IIC subunit3e-1479
NC_012880:2399205:240237424023742403171798Dickeya dadantii Ech703, complete genomePTS system, mannose/fructose/sorbose family, IIC subunit3e-1479
NC_009089:581655:582611582611583369759Clostridium difficile 630, complete genomePTS system, IIc component5e-1478.2
NC_014377:1897857:191013919101391910918780Thermosediminibacter oceani DSM 16646 chromosome, complete genomephosphotransferase system PTS sorbose-specific IIC subunit5e-1375.1
NC_010380:124655:146292146292147197906Streptococcus pneumoniae Hungary19A-6, complete genomephosphotransferase system sugar-specific eiic component6e-1374.7
NC_011149:4474012:449065744906574491406750Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-1273.9
NC_015975:1936504:195133419513341952143810Lactobacillus ruminis ATCC 27782 chromosome, complete genomePTS family mannose/fructose/sorbose porter component IIC6e-1271.2
NC_009617:4436837:445130444513044452095792Clostridium beijerinckii NCIMB 8052 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IIC3e-1168.9
NC_005362:1870620:187723618772361878039804Lactobacillus johnsonii NCC 533, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable mannose specific7e-1167.8
NC_013504:1648551:165622716562271657030804Lactobacillus johnsonii FI9785 chromosome, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probably mannose specific9e-1167.4
NC_008530:1775841:178103617810361781839804Lactobacillus gasseri ATCC 33323, complete genomemannose-specific PTS system component IIC9e-1167.4
NC_006814:403723:440509440509441330822Lactobacillus acidophilus NCFM, complete genomemannose-specific PTS system component IIC4e-1065.1
NC_013192:469771:484469484469485275807Leptotrichia buccalis DSM 1135, complete genomephosphotransferase system PTS sorbose-specific IIC subunit4e-1065.1
NC_016612:2902628:292909729290972929897801Klebsiella oxytoca KCTC 1686 chromosome, complete genomePTS system mannose-specific transporter subunit IIC2e-0963.2
NC_015214:437733:475881475881476693813Lactobacillus acidophilus 30SC chromosome, complete genomePTS system mannose-specific transporter subunit IIC3e-0962.4
NC_014724:439594:476266476266477078813Lactobacillus amylovorus GRL 1112 chromosome, complete genomemannose-specific PTS system component IIC3e-0962.4
NC_014106:419511:451723451723452532810Lactobacillus crispatus ST1, complete genomePTS system, mannose-specific IIC component9e-0960.8
NC_018528:1681060:168828016882801689092813Lactobacillus helveticus R0052 chromosome, complete genomePTS system mannose-specific transporter subunit IIC2e-0859.7
NC_015389:809474:816754816754817578825Coriobacterium glomerans PW2 chromosome, complete genomephosphotransferase system PTS sorbose-specific IIC subunit2e-0859.3
NC_015602:1339067:134521013452101346019810Lactobacillus kefiranofaciens ZW3 chromosome, complete genomePTS system, mannose-specific IIC component4e-0858.5