Pre_GI Gene

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Host: NC_008526 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008526:343445 Lactobacillus casei ATCC 334, complete genome

Host Lineage: Lactobacillus casei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain was isolated from Emmental cheese. Starter culture for milk fermentation and flavor development of cheese. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus casei is used as a starter culture during milk fermentation and for the flavor development of certain bacterial-ripened cheeses.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
343445343744300TransposaseQuickGO ontologyBLASTP
344092344661570Site-specific recombinase DNA invertase Pin related proteinQuickGO ontologyBLASTP
344747345505759TransposaseQuickGO ontologyBLASTP
345621345785165hypothetical proteinBLASTP
346169346789621TransposaseQuickGO ontologyBLASTP
346800346970171hypothetical protein
3475193502872769CRISPR-associated helicaseQuickGO ontologyBLASTP
3502683519771710CRISPR-associated proteinQuickGO ontologyBLASTP
351974352576603CRISPR-associated proteinQuickGO ontologyBLASTP
3525693536541086CRISPR-associated proteinQuickGO ontologyBLASTP
353626354336711CRISPR-associated proteinQuickGO ontologyBLASTP
354352354999648CRISPR-associated proteinQuickGO ontologyBLASTP
355004355951948CRISPR-associated proteinQuickGO ontologyBLASTP
3559483568539063-5 exonuclease and CRISPR-associated protein cas2QuickGO ontologyBLASTP
3582483596451398hypothetical proteinBLASTP
360363360557195hypothetical protein
36089136095666hypothetical protein
360955361089135hypothetical proteinBLASTP
3613423625861245TransposaseQuickGO ontologyBLASTP
362913363572660Transposase IS30 familyQuickGO ontologyBLASTP
363744364142399Pyridoxine 5-phosphate oxidase V related favin-nucleotide-binding proteinQuickGO ontologyBLASTP
364255364626372hypothetical proteinBLASTP
364683365342660Transposase IS30 familyQuickGO ontologyBLASTP
3656743672721599Mannose-specific PTS system component IICDQuickGO ontologyBLASTP